| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is mrcA [H]
Identifier: 93006998
GI number: 93006998
Start: 2666877
End: 2669570
Strand: Direct
Name: mrcA [H]
Synonym: Pcryo_2174
Alternate gene names: 93006998
Gene position: 2666877-2669570 (Clockwise)
Preceding gene: 93006986
Following gene: 93007013
Centisome position: 87.16
GC content: 44.28
Gene sequence:
>2694_bases ATGACCAAAAAAAATGCCACCGTTCGTCTCATTCACTTTTTGGTGGGGCTTTTCATTGCCTGTCTTGCGTTGGCGGTTGT ATTAGCGCTTGCCGTCCCTATTGGCTTCTATGGTATGGCGATGTATTTATCGCCAACGTTGCCAAGCACGCAAGAGATTA AAACGGCAACTTTAGAGATGCCATTACAGATATATAGTAGTGATGACAAATTGATTGGGCAATATGGCAACCGTTTATCA TTGCCTATTACCTTTGAAGAGATACCGGAAGACTTGACCCATGCTTTTTTAGCAGCAGAAGATTCTTCATTTTTTCAGCA CAGCGGTATTAGTATTAAAGGATTAGGGCGCGCGGTCACCGAAGTGGTGACGGATGATGAAAGCCAAACAGGTGGCTCGA CCATCACCATGCAGGTCGCCAAAAATTATTTTCTAAGCTCAGATCGCACGTTGAATCGCAAACTAACGGAATTGTTTTTA GCCCGTAAGATTGAAGACGAGCTGAGTAAAAACGATATTCTTACCCTTTATGTCAACAAAATTTACTTAGGTGAAGGCGC TTACGGTATTCGTGCGGCTGCCAAAAAATATTATAGTAAATCGTTAGAAAATCTCACCATTGCTGAGATGGCAATGCTTG CAGGTTTGCCGAAAGCGCCCTCTAAATACAATCCTGTTGCCAATCCAAGCCGTGCGCTCACGCGCCGTAACTGGATTATT GGTCGCATGCATGAATTGGGTTACATCGACAAAACCCAATATGACGAAGCCATTAATGCGCCCATCGGTATTAAGCTTTA TCAAGAAAAGCTGGATGTTAATATGCCGTATTTGGCAGAAATGACGCGCGCAGCTTTGGTTGATCGTTATGGTGAGCAAG TTATGCATGGCGGCTGGCGTGTACGCTTGACGGTTGATAGTCAAGCACAAATAGATGCAGAAAAGGCAATTTTATCTGGC TTGGTTGCTTACGAGCATCGCCATGGCTGGCGCGGCGCCGAAGCAAATGATGAACCGCTAAAGAATTTTAGTCGCTATAG CAATATGTCGCCTGCCAAAGTGACTAAAGTGAATACCAGTAGTTTTGAGGCAATCATGCTTTCAGGAGAAAGCGTGACCG TTAATTGGTCTGGTATGCGCTGGGCACGTAAATACATCTCTGCTGATCGTATTGGTTATTTTCCAAGTAATGCCAGCCAA ATAGTGAGTAAGAACGATATTATTCGCCTGATACCGACTGCTAGTGGTGGCTGGCAGCTTGGTCAAATACCTGAGATACA AGGTAGTTTGGTTTCTCTGAATCCTGATACCGGTGGCGTTCGTGCCTTGGTCGGTGGCTTTGATTTTAACCATAGTAAAT TTAACCGTGCTCTGCAGGGCTGGCGTCAACCGGGTTCTACCATTAAACCCCTTGTCTATACAGCAGCATTAGAAAAAGGC TATCGTCCAGATAGTATAGTTTCGGATCGCCCGCTGCAAGTAGGTGACTGGAAACCAAAAAACTCTGATGGTCGCTTCTT AGGTGATATTACGTTAAGCCGCGGACTTTATTTATCACGTAACTTAGTATCTATTCGCTTGCTGCAAGCAATTGGCATCT CTGACGCTCGCAACTTATTAGATGAATTTGGTCTTGATAAAGAGAAGCTGCCAACTACTTTGTCTTTAGCGTTGGGTACA GGTCAAGCAACCCCATTACAAATGGCAACCGCTTACGCCACCTTTGCCAATGGCGGGCATCGCATTCAACCTTATTTCAT TGAACAAATTTATAACTATAATAATAAGCTTTTGTTTCAAGCCAATCCCCAGCAAGCTTGTGCCCTATGTTTTAATGAGC AGCTCGACGATGTCAATAAAAAACTAACTGAAGAATATGATGCAAAAATAGAGGAGAGTAAAAAAGTAGCTGAAGACGAT AAAACAGGCGACGCTAAAGAATCGCCGGCAAGTAAAAATACAGAAACTGATATAGAGGCTGACAAGAGTAACACCCCTAC TAAAGACAGTAACAAGATTGATTTGAGCATTTACGATGCCAGTCCAGAATCAGATCGCCTAAAAGCACCTGTTGTACAGT ACGTACGCGCTGAACAAGCTCCGCGTATTTTAAAGCCTAAAGTCGCTTATGAGATGGCAGATATCTTACGTGATGTAATA CAGCGTGGTACAGCGTTTAAAGCAAGATCTTTGGGACGTGATGATATTGGCGGCAAGACAGGAACCACCAATGAAGCGAA AGATGCTTGGTTTGCAGGCTTCCATCCTACCAATGCTACCGTCGTCTGGATGGGATTTGACCAACCATCAACCATGGGTC GTCGCGAATATGGTGGTGTGGCAGCCCTACCCGTTTGGATGGATTTTATGAAAGCCCAACTTAACGACACGCCTAGCCAA TGGGTCTCTATTAATAACCGTGCCAAGTCCAAGAAACAACAGCAAAACATTATAGAGATGATGGATGAAGGGGTCACTGA ACTTGATGGCGAAGATACTGATACAGGCAAATCGGAAAAACCAGTAAAGACATCTATTCAGAAGCGCCAGCCACCTGCTC CAAAACCTGTTGAAACGCCGGCAGTTACGACCGATGTTAAACCTGCTAATAATGGTATTACTAATAGCCCAGCGCAGAAA CCAAAACCATTAGTAGTCAAGCCTGTAGAACGTATGCCAGCGATGCCTGAGTAA
Upstream 100 bases:
>100_bases GTCCTGTAGAGGCTAACTTACACATTTATTATTACTTGGCTATTTTGTTCAAGGTATAATGTTTTTTATCTGTTGCAAAC CTTAATCGATAAGTCTGACT
Downstream 100 bases:
>100_bases TAGACTGCTTTCTATATTGATACATTTAAAAAGGCTGGTTCAGTAAACACTGAGCCAGCCTTTTTTATAGGGCATATTTC AATTGCATTTAATTTTGTGC
Product: penicillin-binding protein 1A
Products: NA
Alternate protein names: PBP-1a; PBP1a; Penicillin-insensitive transglycosylase; Peptidoglycan TGase; Penicillin-sensitive transpeptidase; DD-transpeptidase [H]
Number of amino acids: Translated: 897; Mature: 896
Protein sequence:
>897_residues MTKKNATVRLIHFLVGLFIACLALAVVLALAVPIGFYGMAMYLSPTLPSTQEIKTATLEMPLQIYSSDDKLIGQYGNRLS LPITFEEIPEDLTHAFLAAEDSSFFQHSGISIKGLGRAVTEVVTDDESQTGGSTITMQVAKNYFLSSDRTLNRKLTELFL ARKIEDELSKNDILTLYVNKIYLGEGAYGIRAAAKKYYSKSLENLTIAEMAMLAGLPKAPSKYNPVANPSRALTRRNWII GRMHELGYIDKTQYDEAINAPIGIKLYQEKLDVNMPYLAEMTRAALVDRYGEQVMHGGWRVRLTVDSQAQIDAEKAILSG LVAYEHRHGWRGAEANDEPLKNFSRYSNMSPAKVTKVNTSSFEAIMLSGESVTVNWSGMRWARKYISADRIGYFPSNASQ IVSKNDIIRLIPTASGGWQLGQIPEIQGSLVSLNPDTGGVRALVGGFDFNHSKFNRALQGWRQPGSTIKPLVYTAALEKG YRPDSIVSDRPLQVGDWKPKNSDGRFLGDITLSRGLYLSRNLVSIRLLQAIGISDARNLLDEFGLDKEKLPTTLSLALGT GQATPLQMATAYATFANGGHRIQPYFIEQIYNYNNKLLFQANPQQACALCFNEQLDDVNKKLTEEYDAKIEESKKVAEDD KTGDAKESPASKNTETDIEADKSNTPTKDSNKIDLSIYDASPESDRLKAPVVQYVRAEQAPRILKPKVAYEMADILRDVI QRGTAFKARSLGRDDIGGKTGTTNEAKDAWFAGFHPTNATVVWMGFDQPSTMGRREYGGVAALPVWMDFMKAQLNDTPSQ WVSINNRAKSKKQQQNIIEMMDEGVTELDGEDTDTGKSEKPVKTSIQKRQPPAPKPVETPAVTTDVKPANNGITNSPAQK PKPLVVKPVERMPAMPE
Sequences:
>Translated_897_residues MTKKNATVRLIHFLVGLFIACLALAVVLALAVPIGFYGMAMYLSPTLPSTQEIKTATLEMPLQIYSSDDKLIGQYGNRLS LPITFEEIPEDLTHAFLAAEDSSFFQHSGISIKGLGRAVTEVVTDDESQTGGSTITMQVAKNYFLSSDRTLNRKLTELFL ARKIEDELSKNDILTLYVNKIYLGEGAYGIRAAAKKYYSKSLENLTIAEMAMLAGLPKAPSKYNPVANPSRALTRRNWII GRMHELGYIDKTQYDEAINAPIGIKLYQEKLDVNMPYLAEMTRAALVDRYGEQVMHGGWRVRLTVDSQAQIDAEKAILSG LVAYEHRHGWRGAEANDEPLKNFSRYSNMSPAKVTKVNTSSFEAIMLSGESVTVNWSGMRWARKYISADRIGYFPSNASQ IVSKNDIIRLIPTASGGWQLGQIPEIQGSLVSLNPDTGGVRALVGGFDFNHSKFNRALQGWRQPGSTIKPLVYTAALEKG YRPDSIVSDRPLQVGDWKPKNSDGRFLGDITLSRGLYLSRNLVSIRLLQAIGISDARNLLDEFGLDKEKLPTTLSLALGT GQATPLQMATAYATFANGGHRIQPYFIEQIYNYNNKLLFQANPQQACALCFNEQLDDVNKKLTEEYDAKIEESKKVAEDD KTGDAKESPASKNTETDIEADKSNTPTKDSNKIDLSIYDASPESDRLKAPVVQYVRAEQAPRILKPKVAYEMADILRDVI QRGTAFKARSLGRDDIGGKTGTTNEAKDAWFAGFHPTNATVVWMGFDQPSTMGRREYGGVAALPVWMDFMKAQLNDTPSQ WVSINNRAKSKKQQQNIIEMMDEGVTELDGEDTDTGKSEKPVKTSIQKRQPPAPKPVETPAVTTDVKPANNGITNSPAQK PKPLVVKPVERMPAMPE >Mature_896_residues TKKNATVRLIHFLVGLFIACLALAVVLALAVPIGFYGMAMYLSPTLPSTQEIKTATLEMPLQIYSSDDKLIGQYGNRLSL PITFEEIPEDLTHAFLAAEDSSFFQHSGISIKGLGRAVTEVVTDDESQTGGSTITMQVAKNYFLSSDRTLNRKLTELFLA RKIEDELSKNDILTLYVNKIYLGEGAYGIRAAAKKYYSKSLENLTIAEMAMLAGLPKAPSKYNPVANPSRALTRRNWIIG RMHELGYIDKTQYDEAINAPIGIKLYQEKLDVNMPYLAEMTRAALVDRYGEQVMHGGWRVRLTVDSQAQIDAEKAILSGL VAYEHRHGWRGAEANDEPLKNFSRYSNMSPAKVTKVNTSSFEAIMLSGESVTVNWSGMRWARKYISADRIGYFPSNASQI VSKNDIIRLIPTASGGWQLGQIPEIQGSLVSLNPDTGGVRALVGGFDFNHSKFNRALQGWRQPGSTIKPLVYTAALEKGY RPDSIVSDRPLQVGDWKPKNSDGRFLGDITLSRGLYLSRNLVSIRLLQAIGISDARNLLDEFGLDKEKLPTTLSLALGTG QATPLQMATAYATFANGGHRIQPYFIEQIYNYNNKLLFQANPQQACALCFNEQLDDVNKKLTEEYDAKIEESKKVAEDDK TGDAKESPASKNTETDIEADKSNTPTKDSNKIDLSIYDASPESDRLKAPVVQYVRAEQAPRILKPKVAYEMADILRDVIQ RGTAFKARSLGRDDIGGKTGTTNEAKDAWFAGFHPTNATVVWMGFDQPSTMGRREYGGVAALPVWMDFMKAQLNDTPSQW VSINNRAKSKKQQQNIIEMMDEGVTELDGEDTDTGKSEKPVKTSIQKRQPPAPKPVETPAVTTDVKPANNGITNSPAQKP KPLVVKPVERMPAMPE
Specific function: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal
COG id: COG5009
COG function: function code M; Membrane carboxypeptidase/penicillin-binding protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI87082258, Length=820, Percent_Identity=36.9512195121951, Blast_Score=530, Evalue=1e-151, Organism=Escherichia coli, GI1786343, Length=246, Percent_Identity=34.5528455284553, Blast_Score=132, Evalue=1e-31, Organism=Escherichia coli, GI1788867, Length=200, Percent_Identity=36.5, Blast_Score=117, Evalue=4e-27, Organism=Escherichia coli, GI1789601, Length=177, Percent_Identity=33.8983050847458, Blast_Score=100, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001264 - InterPro: IPR011816 - InterPro: IPR001460 [H]
Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]
EC number: 2.4.2.-; 3.4.-.-
Molecular weight: Translated: 99255; Mature: 99124
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKNATVRLIHFLVGLFIACLALAVVLALAVPIGFYGMAMYLSPTLPSTQEIKTATLEM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEC PLQIYSSDDKLIGQYGNRLSLPITFEEIPEDLTHAFLAAEDSSFFQHSGISIKGLGRAVT CEEEECCCCHHHHHCCCEEECEEEHHHHHHHHHHHHHHCCCCCHHHHCCCEEEHHHHHHH EVVTDDESQTGGSTITMQVAKNYFLSSDRTLNRKLTELFLARKIEDELSKNDILTLYVNK HHHCCCCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE IYLGEGAYGIRAAAKKYYSKSLENLTIAEMAMLAGLPKAPSKYNPVANPSRALTRRNWII EEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH GRMHELGYIDKTQYDEAINAPIGIKLYQEKLDVNMPYLAEMTRAALVDRYGEQVMHGGWR HHHHHCCCCCCHHHHHHHCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEE VRLTVDSQAQIDAEKAILSGLVAYEHRHGWRGAEANDEPLKNFSRYSNMSPAKVTKVNTS EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCC SFEAIMLSGESVTVNWSGMRWARKYISADRIGYFPSNASQIVSKNDIIRLIPTASGGWQL CCEEEEEECCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCCCCCCC GQIPEIQGSLVSLNPDTGGVRALVGGFDFNHSKFNRALQGWRQPGSTIKPLVYTAALEKG CCCCCCCCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC YRPDSIVSDRPLQVGDWKPKNSDGRFLGDITLSRGLYLSRNLVSIRLLQAIGISDARNLL CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCEEECCCHHHHHHHHHHCCHHHHHHH DEFGLDKEKLPTTLSLALGTGQATPLQMATAYATFANGGHRIQPYFIEQIYNYNNKLLFQ HHHCCCHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEECHHHHHHHHCCCCEEEEE ANPQQACALCFNEQLDDVNKKLTEEYDAKIEESKKVAEDDKTGDAKESPASKNTETDIEA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC DKSNTPTKDSNKIDLSIYDASPESDRLKAPVVQYVRAEQAPRILKPKVAYEMADILRDVI CCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH QRGTAFKARSLGRDDIGGKTGTTNEAKDAWFAGFHPTNATVVWMGFDQPSTMGRREYGGV HCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCHHHCCE AALPVWMDFMKAQLNDTPSQWVSINNRAKSKKQQQNIIEMMDEGVTELDGEDTDTGKSEK EHHHHHHHHHHHHHCCCHHHHEECCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCC PVKTSIQKRQPPAPKPVETPAVTTDVKPANNGITNSPAQKPKPLVVKPVERMPAMPE CHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCCC >Mature Secondary Structure TKKNATVRLIHFLVGLFIACLALAVVLALAVPIGFYGMAMYLSPTLPSTQEIKTATLEM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEC PLQIYSSDDKLIGQYGNRLSLPITFEEIPEDLTHAFLAAEDSSFFQHSGISIKGLGRAVT CEEEECCCCHHHHHCCCEEECEEEHHHHHHHHHHHHHHCCCCCHHHHCCCEEEHHHHHHH EVVTDDESQTGGSTITMQVAKNYFLSSDRTLNRKLTELFLARKIEDELSKNDILTLYVNK HHHCCCCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE IYLGEGAYGIRAAAKKYYSKSLENLTIAEMAMLAGLPKAPSKYNPVANPSRALTRRNWII EEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH GRMHELGYIDKTQYDEAINAPIGIKLYQEKLDVNMPYLAEMTRAALVDRYGEQVMHGGWR HHHHHCCCCCCHHHHHHHCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEE VRLTVDSQAQIDAEKAILSGLVAYEHRHGWRGAEANDEPLKNFSRYSNMSPAKVTKVNTS EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCC SFEAIMLSGESVTVNWSGMRWARKYISADRIGYFPSNASQIVSKNDIIRLIPTASGGWQL CCEEEEEECCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCCCCCCC GQIPEIQGSLVSLNPDTGGVRALVGGFDFNHSKFNRALQGWRQPGSTIKPLVYTAALEKG CCCCCCCCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC YRPDSIVSDRPLQVGDWKPKNSDGRFLGDITLSRGLYLSRNLVSIRLLQAIGISDARNLL CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCEEECCCHHHHHHHHHHCCHHHHHHH DEFGLDKEKLPTTLSLALGTGQATPLQMATAYATFANGGHRIQPYFIEQIYNYNNKLLFQ HHHCCCHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEECHHHHHHHHCCCCEEEEE ANPQQACALCFNEQLDDVNKKLTEEYDAKIEESKKVAEDDKTGDAKESPASKNTETDIEA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC DKSNTPTKDSNKIDLSIYDASPESDRLKAPVVQYVRAEQAPRILKPKVAYEMADILRDVI CCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH QRGTAFKARSLGRDDIGGKTGTTNEAKDAWFAGFHPTNATVVWMGFDQPSTMGRREYGGV HCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCHHHCCE AALPVWMDFMKAQLNDTPSQWVSINNRAKSKKQQQNIIEMMDEGVTELDGEDTDTGKSEK EHHHHHHHHHHHHHCCCHHHHEECCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCC PVKTSIQKRQPPAPKPVETPAVTTDVKPANNGITNSPAQKPKPLVVKPVERMPAMPE CHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043; 7901733 [H]