Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is yeeA [H]
Identifier: 93006987
GI number: 93006987
Start: 2649810
End: 2651021
Strand: Reverse
Name: yeeA [H]
Synonym: Pcryo_2163
Alternate gene names: 93006987
Gene position: 2651021-2649810 (Counterclockwise)
Preceding gene: 162280756
Following gene: 93006985
Centisome position: 86.64
GC content: 43.89
Gene sequence:
>1212_bases ATGTCCTGCGTGAAGCCGACTTTTTTACAACGATTTACTGCTCCCGTGATAGAGCCATACGCTCGCTATCAGCATGCTGA TGTGCTGCATGCTATACGTTTGGGCGTGGCAGTTATACTCGCTTTATTAGTCAATAAAGTCACCAATTTTCCACATGGAG AATGGACGACTATCACTGTTTTTATTATTCTAGGATTGTTACAGTATCAAGGTGCAATTTATACTAAGGCTAAAGAGCGA GTACTTGGTACTTTATTAGGTATTGGTGCTGCGCTCGGTATTGTATGGTTTAGTCAAGGCGTAGGGACATGGTTGTGGGT AGATTATGTCATCATCGGACTGATGAGTGGTATTATTGGCTATCTGGCGATTAGGAATCTTGGCTACACAGGGTTATTGA CTGGTATAACCATGTTGATGATTGTCTCGGATTTGGGTCAAAGCACTATCGGCCAAGATGGTATCTACCGTGCCCTCAAT ATTTTACTTGGTACAGGGCTTGCCGTTGCAGCGACATTGATTTTGCCATTGAAGTCCACATTGATGTGGCGATTCTTACT GGCTAGTAACCTCGATGCTTGTAGTAATCTTTATGCTAGGGTAGGCAATCATATCGATACTGCTGAAGAATTGAGTGATG GTGCTGTTCAGTACGTCAATCCAACAGTCTTTGCCGTACCTGTTAACAAAGCCTTAGTGATAGAGCTACAGCAGATCAAT AAAAGACTCTTAGCGGTACGCCCTCATTTGGCAGCAACAACGAGCGAGTCTGGTATCGATAAAGAGACAATTGAGAGTAT TCAACGTACCCACCGAAATATTATTGGTACGATTGATCTGCTGCTAACGGCAGCACCGCGCTTAGCCAGTATCGAGATTG ATGAGGATAATCATATCCTGCTCATACATTATCAGCACGAATTAACCCAAGTGATGCAACATATGGCAGCAGTGTTGCGT AGCCCAAGTGATGAGGTGTTTCGTCCCATTACGCGTATTACCTTATCAGAATATCCAAGCGTAGAAAATTTAGGCTTTGA ATGGCAGGGCTACTTTTGGTTGACACAAACTTTACAAGTGCAATTACAGCAGCTCAGTGACTTATTACAAGAGACTAAGC CGCAGTGGTTTGCGGCTTCTGGTCTGCGCTACCAGCGCCGTGAACAACGACGTATAGAGGAGCATGGCGGTGAAACAGAT TTGCATTTATAA
Upstream 100 bases:
>100_bases ATTCGAGCATGTTTTGACACTTAACGTCTTTTATCTTTTAATAGGTAAAAGGCGTTATTTTTATACTCTTTTTAATTCCA ATTCTCATTAATGATAAGAG
Downstream 100 bases:
>100_bases ATAAAAAAAGCTGACTCTATAAAGTCAGCTTTTTTTTACAATCATAATTACTAAAAACGGCTATCAAAAATCGACCATTA ATAAACAATGATTAACGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MSCVKPTFLQRFTAPVIEPYARYQHADVLHAIRLGVAVILALLVNKVTNFPHGEWTTITVFIILGLLQYQGAIYTKAKER VLGTLLGIGAALGIVWFSQGVGTWLWVDYVIIGLMSGIIGYLAIRNLGYTGLLTGITMLMIVSDLGQSTIGQDGIYRALN ILLGTGLAVAATLILPLKSTLMWRFLLASNLDACSNLYARVGNHIDTAEELSDGAVQYVNPTVFAVPVNKALVIELQQIN KRLLAVRPHLAATTSESGIDKETIESIQRTHRNIIGTIDLLLTAAPRLASIEIDEDNHILLIHYQHELTQVMQHMAAVLR SPSDEVFRPITRITLSEYPSVENLGFEWQGYFWLTQTLQVQLQQLSDLLQETKPQWFAASGLRYQRREQRRIEEHGGETD LHL
Sequences:
>Translated_403_residues MSCVKPTFLQRFTAPVIEPYARYQHADVLHAIRLGVAVILALLVNKVTNFPHGEWTTITVFIILGLLQYQGAIYTKAKER VLGTLLGIGAALGIVWFSQGVGTWLWVDYVIIGLMSGIIGYLAIRNLGYTGLLTGITMLMIVSDLGQSTIGQDGIYRALN ILLGTGLAVAATLILPLKSTLMWRFLLASNLDACSNLYARVGNHIDTAEELSDGAVQYVNPTVFAVPVNKALVIELQQIN KRLLAVRPHLAATTSESGIDKETIESIQRTHRNIIGTIDLLLTAAPRLASIEIDEDNHILLIHYQHELTQVMQHMAAVLR SPSDEVFRPITRITLSEYPSVENLGFEWQGYFWLTQTLQVQLQQLSDLLQETKPQWFAASGLRYQRREQRRIEEHGGETD LHL >Mature_402_residues SCVKPTFLQRFTAPVIEPYARYQHADVLHAIRLGVAVILALLVNKVTNFPHGEWTTITVFIILGLLQYQGAIYTKAKERV LGTLLGIGAALGIVWFSQGVGTWLWVDYVIIGLMSGIIGYLAIRNLGYTGLLTGITMLMIVSDLGQSTIGQDGIYRALNI LLGTGLAVAATLILPLKSTLMWRFLLASNLDACSNLYARVGNHIDTAEELSDGAVQYVNPTVFAVPVNKALVIELQQINK RLLAVRPHLAATTSESGIDKETIESIQRTHRNIIGTIDLLLTAAPRLASIEIDEDNHILLIHYQHELTQVMQHMAAVLRS PSDEVFRPITRITLSEYPSVENLGFEWQGYFWLTQTLQVQLQQLSDLLQETKPQWFAASGLRYQRREQRRIEEHGGETDL HL
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788318, Length=358, Percent_Identity=24.0223463687151, Blast_Score=86, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 44947; Mature: 44816
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCVKPTFLQRFTAPVIEPYARYQHADVLHAIRLGVAVILALLVNKVTNFPHGEWTTITV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH FIILGLLQYQGAIYTKAKERVLGTLLGIGAALGIVWFSQGVGTWLWVDYVIIGLMSGIIG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YLAIRNLGYTGLLTGITMLMIVSDLGQSTIGQDGIYRALNILLGTGLAVAATLILPLKST HHHHHHCCHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH LMWRFLLASNLDACSNLYARVGNHIDTAEELSDGAVQYVNPTVFAVPVNKALVIELQQIN HHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCEEEECCEEEEEECCCHHHHHHHHHH KRLLAVRPHLAATTSESGIDKETIESIQRTHRNIIGTIDLLLTAAPRLASIEIDEDNHIL HHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEE LIHYQHELTQVMQHMAAVLRSPSDEVFRPITRITLSEYPSVENLGFEWQGYFWLTQTLQV EEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHH QLQQLSDLLQETKPQWFAASGLRYQRREQRRIEEHGGETDLHL HHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SCVKPTFLQRFTAPVIEPYARYQHADVLHAIRLGVAVILALLVNKVTNFPHGEWTTITV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH FIILGLLQYQGAIYTKAKERVLGTLLGIGAALGIVWFSQGVGTWLWVDYVIIGLMSGIIG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YLAIRNLGYTGLLTGITMLMIVSDLGQSTIGQDGIYRALNILLGTGLAVAATLILPLKST HHHHHHCCHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH LMWRFLLASNLDACSNLYARVGNHIDTAEELSDGAVQYVNPTVFAVPVNKALVIELQQIN HHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCEEEECCEEEEEECCCHHHHHHHHHH KRLLAVRPHLAATTSESGIDKETIESIQRTHRNIIGTIDLLLTAAPRLASIEIDEDNHIL HHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEE LIHYQHELTQVMQHMAAVLRSPSDEVFRPITRITLSEYPSVENLGFEWQGYFWLTQTLQV EEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHH QLQQLSDLLQETKPQWFAASGLRYQRREQRRIEEHGGETDLHL HHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]