BacMap

Definition	Psychrobacter cryohalolentis K5 chromosome, complete genome.
Accession	NC_007969
Length	3,059,876

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The map label for this gene is fabG [H]

Identifier: 93006985

GI number: 93006985

Start: 2647537

End: 2648328

Strand: Reverse

Name: fabG [H]

Synonym: Pcryo_2161

Alternate gene names: 93006985

Gene position: 2648328-2647537 (Counterclockwise)

Preceding gene: 93006987

Following gene: 93006984

Centisome position: 86.55

GC content: 44.7

Gene sequence:

>792_bases
ATGGCTCAAACCGTTATTCCGACACTTCTTACTGATAAAGTTGCTATCGTCACAGGCGCCAGTCGTGGTCTCGGTGCTCA
AATCGCCATGCAGATGGCAGCGGCAGGCGCGAGCGTTTGCGTGAATTATTTGCATAGTAAAGAGGCGGCTGAAAAAGTGG
TTGCTGATATCGAAGCAGAAGGCGGGCGTGCTTTTACTTATCAAGGGGATGTAACTGATTTAGCACAAATGCAAGCAATG
GCAGCAGAAGTTATAGAACTTTTCGGATGTATTGATATCTTAGTTAACAATGCCTTGCCGAGCTACCAGTTTAACCCGAG
TGCTGATTACACCAGTATCGAGACTGTGAAATGGGCACATTTTTCTCAGCAAATTGATGGCATTGTCCAAGGTGCCGTCA
ATACAGTACAAGCGGTATTACCGCAAATGAAAACTCAGCAGATGGGTAAGATTATCAATATTTCAACCAACTTGGTTTAC
AATCCGGTGGTCACTTATTATGACTATACCACTGCAAAATCTGCATTGATTGGTCTGACACGTAATCTAGCAGCGGAGCT
TGGGCAATATGGTATTCGTGTGAACTTGCTAGCAGGTGGACTATTAAAAACGACTGACGCTAGTAAATTAACCACTGAAG
AAGTGTTTGATTATATCGCCACCACCACGCCACTACGCCAAGCAACCTCAGTTGCCGACTTTGCAAATTCAGTACTATTG
ATGGCATCTGACTTAAGCTCAGCTATTACTGGTCAATCTATCGCCGTTGATGGCGGCTTGACCATGCCTTAA

Upstream 100 bases:

>100_bases
CAATCAATCGTGCTATGATAAGCGTGACTTGGCCTTTAGCCAGAGCTCTTTAAGTATAGTCATACTCTAACCATAACATA
ATAATAAAGGATACAACATC

Downstream 100 bases:

>100_bases
TAATGGCATTATTTACTAAATAAATTGACTTGATTGTACAAGAGAGACGAGATGACGAACCGTAAAATCGCTGGCATTAT
TACTGCTATTATAGGACTGT

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MAQTVIPTLLTDKVAIVTGASRGLGAQIAMQMAAAGASVCVNYLHSKEAAEKVVADIEAEGGRAFTYQGDVTDLAQMQAM
AAEVIELFGCIDILVNNALPSYQFNPSADYTSIETVKWAHFSQQIDGIVQGAVNTVQAVLPQMKTQQMGKIINISTNLVY
NPVVTYYDYTTAKSALIGLTRNLAAELGQYGIRVNLLAGGLLKTTDASKLTTEEVFDYIATTTPLRQATSVADFANSVLL
MASDLSSAITGQSIAVDGGLTMP

Sequences:

>Translated_263_residues
MAQTVIPTLLTDKVAIVTGASRGLGAQIAMQMAAAGASVCVNYLHSKEAAEKVVADIEAEGGRAFTYQGDVTDLAQMQAM
AAEVIELFGCIDILVNNALPSYQFNPSADYTSIETVKWAHFSQQIDGIVQGAVNTVQAVLPQMKTQQMGKIINISTNLVY
NPVVTYYDYTTAKSALIGLTRNLAAELGQYGIRVNLLAGGLLKTTDASKLTTEEVFDYIATTTPLRQATSVADFANSVLL
MASDLSSAITGQSIAVDGGLTMP
>Mature_262_residues
AQTVIPTLLTDKVAIVTGASRGLGAQIAMQMAAAGASVCVNYLHSKEAAEKVVADIEAEGGRAFTYQGDVTDLAQMQAMA
AEVIELFGCIDILVNNALPSYQFNPSADYTSIETVKWAHFSQQIDGIVQGAVNTVQAVLPQMKTQQMGKIINISTNLVYN
PVVTYYDYTTAKSALIGLTRNLAAELGQYGIRVNLLAGGLLKTTDASKLTTEEVFDYIATTTPLRQATSVADFANSVLLM
ASDLSSAITGQSIAVDGGLTMP

Specific function: 7-Alpha-Dehydroxylation Of Cholic Acid, Yielding Deoxycholic Acid And Lithocholic Acid, Respectively. Highest Affinity With Taurochenodeoxycholic Acid. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=254, Percent_Identity=31.8897637795276, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI126723750, Length=257, Percent_Identity=28.0155642023346, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI5031737, Length=257, Percent_Identity=31.1284046692607, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI10190704, Length=268, Percent_Identity=30.2238805970149, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI126723191, Length=191, Percent_Identity=32.4607329842932, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI33667109, Length=210, Percent_Identity=32.3809523809524, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI40254992, Length=251, Percent_Identity=29.0836653386454, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI15277342, Length=268, Percent_Identity=29.1044776119403, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI19923817, Length=265, Percent_Identity=25.2830188679245, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI66933014, Length=231, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI7706318, Length=195, Percent_Identity=31.2820512820513, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI20149619, Length=239, Percent_Identity=27.6150627615063, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI4504505, Length=202, Percent_Identity=29.2079207920792, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI40254986, Length=188, Percent_Identity=30.8510638297872, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI31542939, Length=214, Percent_Identity=29.4392523364486, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787905, Length=256, Percent_Identity=33.59375, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI87082100, Length=268, Percent_Identity=33.2089552238806, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1788459, Length=252, Percent_Identity=30.1587301587302, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1787335, Length=250, Percent_Identity=29.6, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI87082160, Length=255, Percent_Identity=31.7647058823529, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789208, Length=261, Percent_Identity=29.8850574712644, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI2367175, Length=251, Percent_Identity=27.8884462151394, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1790717, Length=253, Percent_Identity=28.0632411067194, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=28.968253968254, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786812, Length=267, Percent_Identity=27.7153558052434, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787545, Length=261, Percent_Identity=25.2873563218391, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI2367365, Length=250, Percent_Identity=28, Blast_Score=61, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=28.8537549407115, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17562910, Length=266, Percent_Identity=30.4511278195489, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17544670, Length=271, Percent_Identity=29.520295202952, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17555706, Length=262, Percent_Identity=30.9160305343511, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17560332, Length=274, Percent_Identity=32.1167883211679, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17568967, Length=211, Percent_Identity=35.5450236966825, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17551412, Length=273, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=273, Percent_Identity=30.03663003663, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=269, Percent_Identity=27.1375464684015, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI25147288, Length=262, Percent_Identity=29.3893129770992, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17561402, Length=258, Percent_Identity=29.4573643410853, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI115534694, Length=260, Percent_Identity=28.4615384615385, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17565030, Length=267, Percent_Identity=28.0898876404494, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=274, Percent_Identity=28.4671532846715, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=273, Percent_Identity=30.7692307692308, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17538182, Length=263, Percent_Identity=29.277566539924, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=271, Percent_Identity=29.1512915129151, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17531453, Length=287, Percent_Identity=27.5261324041812, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=268, Percent_Identity=28.3582089552239, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17567345, Length=177, Percent_Identity=28.2485875706215, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71982365, Length=197, Percent_Identity=29.4416243654822, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=272, Percent_Identity=28.6764705882353, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17562990, Length=269, Percent_Identity=27.8810408921933, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI71994604, Length=263, Percent_Identity=28.8973384030418, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=259, Percent_Identity=26.6409266409266, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=199, Percent_Identity=32.1608040201005, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6324126, Length=259, Percent_Identity=26.2548262548263, Blast_Score=76, Evalue=5e-15,
Organism=Drosophila melanogaster, GI28571526, Length=259, Percent_Identity=29.7297297297297, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21355319, Length=254, Percent_Identity=27.9527559055118, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI21357041, Length=262, Percent_Identity=29.7709923664122, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI18859837, Length=209, Percent_Identity=35.8851674641148, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24644339, Length=256, Percent_Identity=26.953125, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI23397609, Length=258, Percent_Identity=29.0697674418605, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24649181, Length=214, Percent_Identity=29.4392523364486, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355631, Length=179, Percent_Identity=31.8435754189944, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21357673, Length=201, Percent_Identity=31.3432835820896, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24639444, Length=259, Percent_Identity=27.4131274131274, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17737361, Length=267, Percent_Identity=25.8426966292135, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 27812; Mature: 27681

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTVIPTLLTDKVAIVTGASRGLGAQIAMQMAAAGASVCVNYLHSKEAAEKVVADIEAE
CCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GGRAFTYQGDVTDLAQMQAMAAEVIELFGCIDILVNNALPSYQFNPSADYTSIETVKWAH
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
FSQQIDGIVQGAVNTVQAVLPQMKTQQMGKIINISTNLVYNPVVTYYDYTTAKSALIGLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCEEEEEEHHHHHHHHHHHH
RNLAAELGQYGIRVNLLAGGLLKTTDASKLTTEEVFDYIATTTPLRQATSVADFANSVLL
HHHHHHHHHCCEEEEEEECCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MASDLSSAITGQSIAVDGGLTMP
HHHHHHHHHCCCEEEECCCCCCC
>Mature Secondary Structure 
AQTVIPTLLTDKVAIVTGASRGLGAQIAMQMAAAGASVCVNYLHSKEAAEKVVADIEAE
CCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GGRAFTYQGDVTDLAQMQAMAAEVIELFGCIDILVNNALPSYQFNPSADYTSIETVKWAH
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
FSQQIDGIVQGAVNTVQAVLPQMKTQQMGKIINISTNLVYNPVVTYYDYTTAKSALIGLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCEEEEEEHHHHHHHHHHHH
RNLAAELGQYGIRVNLLAGGLLKTTDASKLTTEEVFDYIATTTPLRQATSVADFANSVLL
HHHHHHHHHCCEEEEEEECCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MASDLSSAITGQSIAVDGGLTMP
HHHHHHHHHCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA