Definition Psychrobacter cryohalolentis K5 chromosome, complete genome.
Accession NC_007969
Length 3,059,876

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The map label for this gene is yijE [C]

Identifier: 93006749

GI number: 93006749

Start: 2376013

End: 2376960

Strand: Direct

Name: yijE [C]

Synonym: Pcryo_1925

Alternate gene names: 93006749

Gene position: 2376013-2376960 (Clockwise)

Preceding gene: 93006748

Following gene: 93006754

Centisome position: 77.65

GC content: 44.73

Gene sequence:

>948_bases
ATGGCACATACCGATAGCGCAACGTCAGCACGGCAGTCATGGATAGGCACCATTCAAATCATTACAGCCGCTGTCTGCTG
GGGTACTTTAGGGATATTCTCAACCTATCTCAACCAAAATGGCTTTAGTGGCTGGCAAACGACCATTTTACGTATCGTGA
CCGCCGCTCTTATTATCCTCGTTATGCTGCCAAAACTATGGCCACAGCTAATAAAGTTGCGTCCAAAACAGTGGCTCGGA
CTGGCACTACAGTCGTTGATTGGTGTACTCGGCATGTCGGTTTGCTATTTTTTTGCCGTTATCTATGTCGGTGCTGGTCC
TGCCGTCGCCTTGCTATATACTGCGCCCGTTTTTAGCTTATTATTTTCAGCATTTTTGCTTAATGAATCCATTACTCGGC
AGTCAGCCCTACTGGCACTCATGGCAGTATTTGGTGTCGGCTTGACGATGTTAGGTGAGCAGGCGCAAGTCAACTGGGGT
ATTGCATTAGGTTTATTATCAGGCATATGTTATTCCCTATATGGGGTATTGGGTAAGCGCGCTATGCATGATGCGCACCC
TGCTCCTTTAGTATTTTTTACCTCTATTATCATCAGTGCTGGCATACTGCTACTACTACCTGAAACCTATAAAACTTATG
GACAATTACTAACCTTACCCTTATCTACTTGGGGCTATGCATTAGGATTGTCTTTGATTGGAACCGTCGTACCCTTTGCA
CTTTATATGAAGGCATTAGAGAAGCTACCTGCCACCCGTGCATCAGTGTTTACTATCTTTGAGCCTCTAACCGCGATTGC
TTTGGCAACGCTATTACTGCATCAATCATTATCTTGGATTCAATATGTCGGCGTCATACTCATTCTGCTAGCAGCTTTAT
TTAATGCTGTACTAAATGGTACTACTACTCGCGTACCACGTTGGCTAAAAAGACGGCAAAGGATTTAG

Upstream 100 bases:

>100_bases
AGGTTGTCTTTTGTTATTTCAGCATATTATTAAGTAATGAGCCAAAAAGCTTGGACCGCTTATTCTTTGAACTTGGTAAC
AAATAAAAATAGAGAGCGAT

Downstream 100 bases:

>100_bases
TCGATATCCTATAATCACTTTTAATAGCCTTAGGTTCTTTTCTGTTGAATCAAAAAAAAGCCCCTACTATGAATATAGTT
GGGGCTTTTTATTTAGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MAHTDSATSARQSWIGTIQIITAAVCWGTLGIFSTYLNQNGFSGWQTTILRIVTAALIILVMLPKLWPQLIKLRPKQWLG
LALQSLIGVLGMSVCYFFAVIYVGAGPAVALLYTAPVFSLLFSAFLLNESITRQSALLALMAVFGVGLTMLGEQAQVNWG
IALGLLSGICYSLYGVLGKRAMHDAHPAPLVFFTSIIISAGILLLLPETYKTYGQLLTLPLSTWGYALGLSLIGTVVPFA
LYMKALEKLPATRASVFTIFEPLTAIALATLLLHQSLSWIQYVGVILILLAALFNAVLNGTTTRVPRWLKRRQRI

Sequences:

>Translated_315_residues
MAHTDSATSARQSWIGTIQIITAAVCWGTLGIFSTYLNQNGFSGWQTTILRIVTAALIILVMLPKLWPQLIKLRPKQWLG
LALQSLIGVLGMSVCYFFAVIYVGAGPAVALLYTAPVFSLLFSAFLLNESITRQSALLALMAVFGVGLTMLGEQAQVNWG
IALGLLSGICYSLYGVLGKRAMHDAHPAPLVFFTSIIISAGILLLLPETYKTYGQLLTLPLSTWGYALGLSLIGTVVPFA
LYMKALEKLPATRASVFTIFEPLTAIALATLLLHQSLSWIQYVGVILILLAALFNAVLNGTTTRVPRWLKRRQRI
>Mature_314_residues
AHTDSATSARQSWIGTIQIITAAVCWGTLGIFSTYLNQNGFSGWQTTILRIVTAALIILVMLPKLWPQLIKLRPKQWLGL
ALQSLIGVLGMSVCYFFAVIYVGAGPAVALLYTAPVFSLLFSAFLLNESITRQSALLALMAVFGVGLTMLGEQAQVNWGI
ALGLLSGICYSLYGVLGKRAMHDAHPAPLVFFTSIIISAGILLLLPETYKTYGQLLTLPLSTWGYALGLSLIGTVVPFAL
YMKALEKLPATRASVFTIFEPLTAIALATLLLHQSLSWIQYVGVILILLAALFNAVLNGTTTRVPRWLKRRQRI

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34273; Mature: 34141

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHTDSATSARQSWIGTIQIITAAVCWGTLGIFSTYLNQNGFSGWQTTILRIVTAALIIL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VMLPKLWPQLIKLRPKQWLGLALQSLIGVLGMSVCYFFAVIYVGAGPAVALLYTAPVFSL
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LFSAFLLNESITRQSALLALMAVFGVGLTMLGEQAQVNWGIALGLLSGICYSLYGVLGKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMHDAHPAPLVFFTSIIISAGILLLLPETYKTYGQLLTLPLSTWGYALGLSLIGTVVPFA
HHHCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYMKALEKLPATRASVFTIFEPLTAIALATLLLHQSLSWIQYVGVILILLAALFNAVLNG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TTTRVPRWLKRRQRI
CHHHHHHHHHHHCCC
>Mature Secondary Structure 
AHTDSATSARQSWIGTIQIITAAVCWGTLGIFSTYLNQNGFSGWQTTILRIVTAALIIL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VMLPKLWPQLIKLRPKQWLGLALQSLIGVLGMSVCYFFAVIYVGAGPAVALLYTAPVFSL
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LFSAFLLNESITRQSALLALMAVFGVGLTMLGEQAQVNWGIALGLLSGICYSLYGVLGKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMHDAHPAPLVFFTSIIISAGILLLLPETYKTYGQLLTLPLSTWGYALGLSLIGTVVPFA
HHHCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYMKALEKLPATRASVFTIFEPLTAIALATLLLHQSLSWIQYVGVILILLAALFNAVLNG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TTTRVPRWLKRRQRI
CHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]