Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93006739
Identifier: 93006739
GI number: 93006739
Start: 2366064
End: 2366630
Strand: Direct
Name: 93006739
Synonym: Pcryo_1915
Alternate gene names: NA
Gene position: 2366064-2366630 (Clockwise)
Preceding gene: 93006737
Following gene: 93006740
Centisome position: 77.33
GC content: 46.38
Gene sequence:
>567_bases ATGTGTATCCGTCAACACTTTGTGTCAACAGATAAGGATATCACTGTGAGCTTATCACTACCGCAACTGAACGCCCTCTC GCAAGCCGATGCGACCTCAGAATTTCTAACTTGCTGTACCAGTAGCCAATGGGCGCAAACCTTGGCAGACGCACGTCCGT TTGCAGATATAAAAGCGCTACTGAGTGCAAGCGATGACGCATGGCAACAAGCTAAAGCGGATGAAGCTAACTTGCTAGAA GCCTTTGATGGTCACCCACAGATTGGCAATGTCGACTCATTAAAAGAGAAGTATCGCAATACGCAAGACAGTGCCGCTCA TGAGCAATCAGGCGCCAATGACGCTGAAGATGCGGTACTTGAAGCGTTAGCACAAGGCAATCAAGACTATCTCGATAAAT TCGGCTTTATCTTTATTGTCTTTGCAACTGGTAAAAGCGCGCAGCAAATGCTTGATCTATTGCAAGCACGCCTGCCAAAT GATCGCGAGACTGAATTGCTCAATGCGGCTACTGAACAAAATAAAATCACGCGTTTGCGTTTACAAAAACTGTTAGGCGA CGCTTAA
Upstream 100 bases:
>100_bases CTACTTTCACCTGAGTTTTCCCTGAGTTAAGTAATCAACAGACTAATATCAGCACACGATACTGTCTGTACCTTATAAAT TCATATCACTCAAATGATAA
Downstream 100 bases:
>100_bases ATCTTGCTTTGTCTCTCTCATACATAAAAGGAATTATTATGTCAGGTACTCTTTCATCACATATTTTAGACACCCATCTT GGCAAGCCTGCCGCTGATAT
Product: putative OHCU decarboxylase
Products: NA
Alternate protein names: Bifunctional Allantoicase/OHCU Decarboxylase; Allantoicase; Oxo-4-Hydroxy-4-Carboxy-5-Ureidoimidazoline Decarboxylase; Uricase; Urate Oxidase N-Terminal; Uricase-Like Protein; Xanthine Permease; Ohcu Decarboxylase; Conserved Protein
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MCIRQHFVSTDKDITVSLSLPQLNALSQADATSEFLTCCTSSQWAQTLADARPFADIKALLSASDDAWQQAKADEANLLE AFDGHPQIGNVDSLKEKYRNTQDSAAHEQSGANDAEDAVLEALAQGNQDYLDKFGFIFIVFATGKSAQQMLDLLQARLPN DRETELLNAATEQNKITRLRLQKLLGDA
Sequences:
>Translated_188_residues MCIRQHFVSTDKDITVSLSLPQLNALSQADATSEFLTCCTSSQWAQTLADARPFADIKALLSASDDAWQQAKADEANLLE AFDGHPQIGNVDSLKEKYRNTQDSAAHEQSGANDAEDAVLEALAQGNQDYLDKFGFIFIVFATGKSAQQMLDLLQARLPN DRETELLNAATEQNKITRLRLQKLLGDA >Mature_188_residues MCIRQHFVSTDKDITVSLSLPQLNALSQADATSEFLTCCTSSQWAQTLADARPFADIKALLSASDDAWQQAKADEANLLE AFDGHPQIGNVDSLKEKYRNTQDSAAHEQSGANDAEDAVLEALAQGNQDYLDKFGFIFIVFATGKSAQQMLDLLQARLPN DRETELLNAATEQNKITRLRLQKLLGDA
Specific function: Unknown
COG id: COG3195
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20647; Mature: 20647
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCIRQHFVSTDKDITVSLSLPQLNALSQADATSEFLTCCTSSQWAQTLADARPFADIKAL CCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHH LSASDDAWQQAKADEANLLEAFDGHPQIGNVDSLKEKYRNTQDSAAHEQSGANDAEDAVL HHCCCHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH EALAQGNQDYLDKFGFIFIVFATGKSAQQMLDLLQARLPNDRETELLNAATEQNKITRLR HHHHCCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LQKLLGDA HHHHHCCC >Mature Secondary Structure MCIRQHFVSTDKDITVSLSLPQLNALSQADATSEFLTCCTSSQWAQTLADARPFADIKAL CCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHH LSASDDAWQQAKADEANLLEAFDGHPQIGNVDSLKEKYRNTQDSAAHEQSGANDAEDAVL HHCCCHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH EALAQGNQDYLDKFGFIFIVFATGKSAQQMLDLLQARLPNDRETELLNAATEQNKITRLR HHHHCCCHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LQKLLGDA HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA