Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is lldP [C]
Identifier: 93006712
GI number: 93006712
Start: 2332564
End: 2334321
Strand: Direct
Name: lldP [C]
Synonym: Pcryo_1888
Alternate gene names: 93006712
Gene position: 2332564-2334321 (Clockwise)
Preceding gene: 93006711
Following gene: 93006713
Centisome position: 76.23
GC content: 45.34
Gene sequence:
>1758_bases ATGTACACTTTTTTGGCCTTAGCGCCTATTCTGGTAGTACTCGTTTTGCTTGTAATGTTGCGGCTCCCTGCCAAGATTTC TATGGGCGTTGCCTATTTAGTAACCGCGCTATTAGCGTTGTTCGTTTGGCAAGCCAGTGGCGCCCAAGTCGCAGCCGCGA CTGTAAACGGCATCATCGTCGCACTCACGCTTTTATTTATTGTATTTGCGGCTATTTTATTGCTGAATACTTTGAAGGAA GGGGGCGCTATTGTCGCTATTCGTAAAGGCTTTATGGATATCTCGCCCGATAGACGCGTTCAAGTTATCATTGTGGCGTG GTTATTCGGCTCGCTGATAGAAGGCTCATCAGGATTTGGTACGCCATCTGCTATCGGTGCACCGTTGTTGTTGGCTTTAG GTTTCCCAGCGATGGCATCAGTTATGGCTATGTTAATTATTCAGTCGACGCCCGTATCATTTGGTGCCGTTGGTACGCCA GTATTACTTGGCGTTTGGACTGGTATCAATGATAAGCCAGATATAACGCAAGCGATTGCGCCACTCTCAACTGAAAACTA TCTATTACAAATCGCGGGTAACATCGGTCTGATACATGCGCTGGTGGGTTTTCTAATTCCGTTACTTTTGAGTGGATTTT TGACTCGGTTCTTTGGTAAAAATCGCTCCTTCGTTGAAGGGCTCAAAGTATGGCCTTTTGCAATTTTTGCTGGTCTCTGC TTTACCGTTCCTTATTATTTAGTGGCTAGATACCTAGGTCCTGAGTTCCCATCATTGGTCGGCGGTTTTATCGGTCTTAT GATTGTGCTTCCTGCAGCAAAGCGCGGCTTCTTGATGCCTAAAGAGATTTTTGATTTTGCGCCACGCGCTAAATGGGATA AAGACTGGCTAGGCTCGTTACCTGAAGAAAAGTTTGATGATTCCATTGCACCAAGATTTTCTTTGGTTCGGGCATTTTCT CCTTATCTCATCGTTATTGGTCTACTAATCATCACTCGAGTCATTGCACCACTGAAGGCATTTTTGACTGGAGATTTGAC CACTATACAATTTACCAATCTTTTTGGTACAACTATTTCTAGTAAAATCCAACTTGCCTATTCTCCAGGTATCATTCTAA TTATTGTTGCCTTAATCTCTATCTTGTTGTTCAAAATGAACGGACAAGCCGTCAAACGTAGTTGGAGTAGTTCTGCAAAA ACCATGGTAGCCGCCGCACCAGCCTTGCTGTTTTCGGTACCGATGGTACAAGTATTCATCAACTCCGGGTCAGCTGCTGA AGTCGCAAATTCGCTACCCGCTATGCCCATCTTACTGGCTGAGAGTGCCGCTGGTGCATTTCAAAATGCATGGCCACTCG TGTCTCCGTGGATTGGCGCGCTGGGTGCGTTCATTGCAGGCTCAAATACCGTCAGTAATATGATGTTCGCTTACTTTCAG TGGTCAACCGCCAGTCAAATTGGCTTAGATGTCAATCTTGCTGCACAAGTAGTAGCACTGCAAGCGGTCGGTGGCGCAGC GGGTAATATGATTGCGGTACATAACGTCGTTGCTGCTTGCGCGGTGGTTGGTCTAATGGATAAAGAAGGCTATGTTATTC GCAAAACCTTAGTCGCAATGACATACTATGTGATTCAGGCAGGATTGATCGGTATGGGTATTATTTTCGGTCAAATGTGG TGGTGGATATTGGCTGTCATTTGGCCAATCGCATTTTTTGGCATCATGGCAATGACGAGTAAAAAAACCGTTGCTTAA
Upstream 100 bases:
>100_bases TACGGGCTTCTTTTGGCTTAATACTGATAAACAAAAAAGAAATATCATTCAATGATATTTCAAAGATGACTTCAACTACA TATACCAAGGACGGTTTATT
Downstream 100 bases:
>100_bases CATGAGTTAGCTGTACTAGTAAATCTGTGAATCTGCACTCAGTACTTGAACTGACGCTATTATACTAACTATGATAGCGT CAGTTTTATGTCACGGTTAA
Product: L-lactate transport
Products: Proton [Cytoplasm]; lactate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MYTFLALAPILVVLVLLVMLRLPAKISMGVAYLVTALLALFVWQASGAQVAAATVNGIIVALTLLFIVFAAILLLNTLKE GGAIVAIRKGFMDISPDRRVQVIIVAWLFGSLIEGSSGFGTPSAIGAPLLLALGFPAMASVMAMLIIQSTPVSFGAVGTP VLLGVWTGINDKPDITQAIAPLSTENYLLQIAGNIGLIHALVGFLIPLLLSGFLTRFFGKNRSFVEGLKVWPFAIFAGLC FTVPYYLVARYLGPEFPSLVGGFIGLMIVLPAAKRGFLMPKEIFDFAPRAKWDKDWLGSLPEEKFDDSIAPRFSLVRAFS PYLIVIGLLIITRVIAPLKAFLTGDLTTIQFTNLFGTTISSKIQLAYSPGIILIIVALISILLFKMNGQAVKRSWSSSAK TMVAAAPALLFSVPMVQVFINSGSAAEVANSLPAMPILLAESAAGAFQNAWPLVSPWIGALGAFIAGSNTVSNMMFAYFQ WSTASQIGLDVNLAAQVVALQAVGGAAGNMIAVHNVVAACAVVGLMDKEGYVIRKTLVAMTYYVIQAGLIGMGIIFGQMW WWILAVIWPIAFFGIMAMTSKKTVA
Sequences:
>Translated_585_residues MYTFLALAPILVVLVLLVMLRLPAKISMGVAYLVTALLALFVWQASGAQVAAATVNGIIVALTLLFIVFAAILLLNTLKE GGAIVAIRKGFMDISPDRRVQVIIVAWLFGSLIEGSSGFGTPSAIGAPLLLALGFPAMASVMAMLIIQSTPVSFGAVGTP VLLGVWTGINDKPDITQAIAPLSTENYLLQIAGNIGLIHALVGFLIPLLLSGFLTRFFGKNRSFVEGLKVWPFAIFAGLC FTVPYYLVARYLGPEFPSLVGGFIGLMIVLPAAKRGFLMPKEIFDFAPRAKWDKDWLGSLPEEKFDDSIAPRFSLVRAFS PYLIVIGLLIITRVIAPLKAFLTGDLTTIQFTNLFGTTISSKIQLAYSPGIILIIVALISILLFKMNGQAVKRSWSSSAK TMVAAAPALLFSVPMVQVFINSGSAAEVANSLPAMPILLAESAAGAFQNAWPLVSPWIGALGAFIAGSNTVSNMMFAYFQ WSTASQIGLDVNLAAQVVALQAVGGAAGNMIAVHNVVAACAVVGLMDKEGYVIRKTLVAMTYYVIQAGLIGMGIIFGQMW WWILAVIWPIAFFGIMAMTSKKTVA >Mature_585_residues MYTFLALAPILVVLVLLVMLRLPAKISMGVAYLVTALLALFVWQASGAQVAAATVNGIIVALTLLFIVFAAILLLNTLKE GGAIVAIRKGFMDISPDRRVQVIIVAWLFGSLIEGSSGFGTPSAIGAPLLLALGFPAMASVMAMLIIQSTPVSFGAVGTP VLLGVWTGINDKPDITQAIAPLSTENYLLQIAGNIGLIHALVGFLIPLLLSGFLTRFFGKNRSFVEGLKVWPFAIFAGLC FTVPYYLVARYLGPEFPSLVGGFIGLMIVLPAAKRGFLMPKEIFDFAPRAKWDKDWLGSLPEEKFDDSIAPRFSLVRAFS PYLIVIGLLIITRVIAPLKAFLTGDLTTIQFTNLFGTTISSKIQLAYSPGIILIIVALISILLFKMNGQAVKRSWSSSAK TMVAAAPALLFSVPMVQVFINSGSAAEVANSLPAMPILLAESAAGAFQNAWPLVSPWIGALGAFIAGSNTVSNMMFAYFQ WSTASQIGLDVNLAAQVVALQAVGGAAGNMIAVHNVVAACAVVGLMDKEGYVIRKTLVAMTYYVIQAGLIGMGIIFGQMW WWILAVIWPIAFFGIMAMTSKKTVA
Specific function: May play a role in L-lactate transport [H]
COG id: COG1620
COG function: function code C; L-lactate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lactate permease family [H]
Homologues:
Organism=Escherichia coli, GI1790031, Length=575, Percent_Identity=27.304347826087, Blast_Score=142, Evalue=5e-35, Organism=Escherichia coli, GI1789347, Length=265, Percent_Identity=29.0566037735849, Blast_Score=102, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003804 [H]
Pfam domain/function: PF02652 Lactate_perm [H]
EC number: NA
Molecular weight: Translated: 62368; Mature: 62368
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTFLALAPILVVLVLLVMLRLPAKISMGVAYLVTALLALFVWQASGAQVAAATVNGIIV CCHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH ALTLLFIVFAAILLLNTLKEGGAIVAIRKGFMDISPDRRVQVIIVAWLFGSLIEGSSGFG HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCC TPSAIGAPLLLALGFPAMASVMAMLIIQSTPVSFGAVGTPVLLGVWTGINDKPDITQAIA CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCCCCCHHHHHC PLSTENYLLQIAGNIGLIHALVGFLIPLLLSGFLTRFFGKNRSFVEGLKVWPFAIFAGLC CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FTVPYYLVARYLGPEFPSLVGGFIGLMIVLPAAKRGFLMPKEIFDFAPRAKWDKDWLGSL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHCCC PEEKFDDSIAPRFSLVRAFSPYLIVIGLLIITRVIAPLKAFLTGDLTTIQFTNLFGTTIS CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHC SKIQLAYSPGIILIIVALISILLFKMNGQAVKRSWSSSAKTMVAAAPALLFSVPMVQVFI CCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NSGSAAEVANSLPAMPILLAESAAGAFQNAWPLVSPWIGALGAFIAGSNTVSNMMFAYFQ CCCCHHHHHHCCCCCHHEEEHHHCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHC WSTASQIGLDVNLAAQVVALQAVGGAAGNMIAVHNVVAACAVVGLMDKEGYVIRKTLVAM CCCHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TYYVIQAGLIGMGIIFGQMWWWILAVIWPIAFFGIMAMTSKKTVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MYTFLALAPILVVLVLLVMLRLPAKISMGVAYLVTALLALFVWQASGAQVAAATVNGIIV CCHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH ALTLLFIVFAAILLLNTLKEGGAIVAIRKGFMDISPDRRVQVIIVAWLFGSLIEGSSGFG HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCC TPSAIGAPLLLALGFPAMASVMAMLIIQSTPVSFGAVGTPVLLGVWTGINDKPDITQAIA CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCCCCCHHHHHC PLSTENYLLQIAGNIGLIHALVGFLIPLLLSGFLTRFFGKNRSFVEGLKVWPFAIFAGLC CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FTVPYYLVARYLGPEFPSLVGGFIGLMIVLPAAKRGFLMPKEIFDFAPRAKWDKDWLGSL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHCCC PEEKFDDSIAPRFSLVRAFSPYLIVIGLLIITRVIAPLKAFLTGDLTTIQFTNLFGTTIS CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHC SKIQLAYSPGIILIIVALISILLFKMNGQAVKRSWSSSAKTMVAAAPALLFSVPMVQVFI CCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NSGSAAEVANSLPAMPILLAESAAGAFQNAWPLVSPWIGALGAFIAGSNTVSNMMFAYFQ CCCCHHHHHHCCCCCHHEEEHHHCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHC WSTASQIGLDVNLAAQVVALQAVGGAAGNMIAVHNVVAACAVVGLMDKEGYVIRKTLVAM CCCHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TYYVIQAGLIGMGIIFGQMWWWILAVIWPIAFFGIMAMTSKKTVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; lactate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + lactate [Periplasm] = Proton [Cytoplasm] + lactate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]