Definition Psychrobacter cryohalolentis K5 chromosome, complete genome.
Accession NC_007969
Length 3,059,876

Click here to switch to the map view.

The map label for this gene is 93006598

Identifier: 93006598

GI number: 93006598

Start: 2195017

End: 2195883

Strand: Direct

Name: 93006598

Synonym: Pcryo_1774

Alternate gene names: NA

Gene position: 2195017-2195883 (Clockwise)

Preceding gene: 93006595

Following gene: 93006609

Centisome position: 71.74

GC content: 39.1

Gene sequence:

>867_bases
ATGTTAACTTTTCATTCAAAATCATCATTGCCTATATTCAAAACGGCAATGGCTTCTACTTTATTAATCGCTGCTGTACA
ACTGATGACAGGCTGTGACTTACAGCCTTCATCTACAAATAACGATGACACTACACAAACGAATAATATAGACAAAGACA
TGACCAAGAATGATGAGATGCCTGTCAATCCAGCACCTACAGATTCTGGCGCTATGGATAAAATACAAACTAACAACGCA
GCAGATATAGCTGATGAGCAAATCGTCAGCCCGTCAGGGTATCAAAATTTAAGCTTCGGTCAGGCTATTACCCCTGAGTT
GCTAAGTAGCCTAGGAATAACCAAAGCCAAGAGCGATAACGAACAATGCTATTACGTCAGTAATCCAGCACTGAGTTATG
TCGATAAAGAGTACGGTGAACGCGCTTCTGTTTTATATCAAATCATAGATGGTAAAGTTGCTCTGATCAGTATTCGGGAT
CCAATCATCCCGTTTTATAAAGACATCAATATTGGCAATTCCGCTACAGACGTTATGAAAGCACATAATGACGAGCTCAC
TTACGAGGTCGATAAATATGCGGTTGATGGTGATTACTATAGCCTGATTGCTAACATCAATTTCAAAATGATAAAAGAAA
GCCCACTTGGAGAATCATTAAGAGACGAAAATATTGAGCTTAATAATAAAGAGGATAAGTTACCCCTACAAATTGAATAT
CATATCAAGGGCGGTCAAAAGCTGAGTGATTCTACGATTAAGGCGACTGAGTGGACAGCAGACAATAAAAGCCTATTAAA
AGGTGAGGTAGGAAGCATCGATATTGGTATACCAGAAGCGATTTATTTGGTGGAAGGCTGCTCTTAA

Upstream 100 bases:

>100_bases
AAACTTTAGCATCAATAAAATCTAGCATAAAAAAGACAGTTTATACAAGGTTCATTAAGGTATATATTAATATCAATGAC
TCGAATTCGGGAATTAAGCC

Downstream 100 bases:

>100_bases
AAGTTGAACATAATAACCCAGCATCTAGCTGGGTTATTAGTGAAAGGCCATTTTTATAAGGTTGCTTTGTGACTCATGCT
CAATCAATGAGTTATCGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MLTFHSKSSLPIFKTAMASTLLIAAVQLMTGCDLQPSSTNNDDTTQTNNIDKDMTKNDEMPVNPAPTDSGAMDKIQTNNA
ADIADEQIVSPSGYQNLSFGQAITPELLSSLGITKAKSDNEQCYYVSNPALSYVDKEYGERASVLYQIIDGKVALISIRD
PIIPFYKDINIGNSATDVMKAHNDELTYEVDKYAVDGDYYSLIANINFKMIKESPLGESLRDENIELNNKEDKLPLQIEY
HIKGGQKLSDSTIKATEWTADNKSLLKGEVGSIDIGIPEAIYLVEGCS

Sequences:

>Translated_288_residues
MLTFHSKSSLPIFKTAMASTLLIAAVQLMTGCDLQPSSTNNDDTTQTNNIDKDMTKNDEMPVNPAPTDSGAMDKIQTNNA
ADIADEQIVSPSGYQNLSFGQAITPELLSSLGITKAKSDNEQCYYVSNPALSYVDKEYGERASVLYQIIDGKVALISIRD
PIIPFYKDINIGNSATDVMKAHNDELTYEVDKYAVDGDYYSLIANINFKMIKESPLGESLRDENIELNNKEDKLPLQIEY
HIKGGQKLSDSTIKATEWTADNKSLLKGEVGSIDIGIPEAIYLVEGCS
>Mature_288_residues
MLTFHSKSSLPIFKTAMASTLLIAAVQLMTGCDLQPSSTNNDDTTQTNNIDKDMTKNDEMPVNPAPTDSGAMDKIQTNNA
ADIADEQIVSPSGYQNLSFGQAITPELLSSLGITKAKSDNEQCYYVSNPALSYVDKEYGERASVLYQIIDGKVALISIRD
PIIPFYKDINIGNSATDVMKAHNDELTYEVDKYAVDGDYYSLIANINFKMIKESPLGESLRDENIELNNKEDKLPLQIEY
HIKGGQKLSDSTIKATEWTADNKSLLKGEVGSIDIGIPEAIYLVEGCS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31598; Mature: 31598

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFHSKSSLPIFKTAMASTLLIAAVQLMTGCDLQPSSTNNDDTTQTNNIDKDMTKNDEM
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVNPAPTDSGAMDKIQTNNAADIADEQIVSPSGYQNLSFGQAITPELLSSLGITKAKSDN
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC
EQCYYVSNPALSYVDKEYGERASVLYQIIDGKVALISIRDPIIPFYKDINIGNSATDVMK
CEEEEECCCHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCHHHHHH
AHNDELTYEVDKYAVDGDYYSLIANINFKMIKESPLGESLRDENIELNNKEDKLPLQIEY
HCCCCEEEEEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCCCEECCCCCCCCEEEEE
HIKGGQKLSDSTIKATEWTADNKSLLKGEVGSIDIGIPEAIYLVEGCS
EECCCCEECCCEEEEEEECCCCHHHHCCCCCEEEECCCCEEEEEECCC
>Mature Secondary Structure
MLTFHSKSSLPIFKTAMASTLLIAAVQLMTGCDLQPSSTNNDDTTQTNNIDKDMTKNDEM
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVNPAPTDSGAMDKIQTNNAADIADEQIVSPSGYQNLSFGQAITPELLSSLGITKAKSDN
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC
EQCYYVSNPALSYVDKEYGERASVLYQIIDGKVALISIRDPIIPFYKDINIGNSATDVMK
CEEEEECCCHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCHHHHHH
AHNDELTYEVDKYAVDGDYYSLIANINFKMIKESPLGESLRDENIELNNKEDKLPLQIEY
HCCCCEEEEEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCCCEECCCCCCCCEEEEE
HIKGGQKLSDSTIKATEWTADNKSLLKGEVGSIDIGIPEAIYLVEGCS
EECCCCEECCCEEEEEEECCCCHHHHCCCCCEEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA