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The map label for this gene is fdhD [H]

Identifier: 93006427

GI number: 93006427

Start: 1965373

End: 1966386

Strand: Direct

Name: fdhD [H]

Synonym: Pcryo_1603

Alternate gene names: 93006427

Gene position: 1965373-1966386 (Clockwise)

Preceding gene: 93006426

Following gene: 93006428

Centisome position: 64.23

GC content: 44.38

Gene sequence:

>1014_bases
ATGGCAAACAAACCTCACTTGGCTGCAGAAGATAGCTTTAAGAAAGATGCGCCATTATCACGGCTACATGTGGCATATAA
ACACAGCTATGCATCAGATACATTTTTAGATGCTGCTAAGAAGGCGCCGCTGGATATTGATACCAAGTCAGGAATGTTGG
CTGTTGAGGCAGCTGTAGCCATTGTAATTAATGGCATTCATTACGCTGTCTTGATGGCAAGTCCTTATCAGCTCGAATAC
CTTGCCATCGGCTTTTTATATAGTGAAGGATTGATTCAGCATAGTCATGAATTACTAGATTGGGATATTACTCAATTAAC
AGACGATGAAAGTTATCAAGACTTTACTCCTGATTCTTTCATTCAAAATTCTTCTAATAAAGATTCTCTTAATTCTAATG
TGACTGATGAGCTTATAAGCTTGGATCAGCTCTCAGAGCAGCTACAAGACTATGATATATACGTGGTCGAGCTAGTCTTA
AACCAGCGCTGTCATCAGCGTATTCAAGCGCAAAAACGCCAACTGGCAGGACGCACAGGATGCGGTATGTGCGGCATAAC
GGGTTTAACGCAAGCACTACCCGATCTAAGTGAATATCAGATAAACAAGCTATTGCTTAGTAGAGCGATGCCTAGTCTTG
ACGATTTACTGAGTATACAGGCGCAAATCAATGCAGCCCAGCATACCCATCAGCTCACAGGCGCTGTCCATGCTGCTGCA
ACCCTATACGAGCAGCAGCTGTACCTATTTGAGGACGTGGGGCGCCATAACGCCCTTGATAAGCTCATAGGATGGCAGTT
GCATCATAAGGTAGAGGTTGACTATGTGCTAATGACTTCGCGTTTATCGATTGAGCTGGTACAAAAATCCATTCGTAGTC
GTATACCTTGGCTGATTGGTATGTCTGCACCGACCAGTACCGCGGTACGTGTTGCCGAGCGTTATGGCTTAGGCCTAGCA
GGATTTTTACGTGATAACCGCGTGACTTACTACGCAGGTTATGCCGACTCTTAA

Upstream 100 bases:

>100_bases
GAAGTGTGTTGAACAAAGCAGTATGGCAACTGCCGTATGATGGGTATCTCGGCATTAGGACTTTTATTTTATTGATAACA
CAGGCTAATAAGCACTCACA

Downstream 100 bases:

>100_bases
AATACATACACCCTCTTCTACTCTAATGTTTGAACACATTCTTTGTCTAACCACTTCCATCAAACTTTGTTTTTTAATAT
CTTCCTCATCTGTCGAACAG

Product: formate dehydrogenase subunit FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MANKPHLAAEDSFKKDAPLSRLHVAYKHSYASDTFLDAAKKAPLDIDTKSGMLAVEAAVAIVINGIHYAVLMASPYQLEY
LAIGFLYSEGLIQHSHELLDWDITQLTDDESYQDFTPDSFIQNSSNKDSLNSNVTDELISLDQLSEQLQDYDIYVVELVL
NQRCHQRIQAQKRQLAGRTGCGMCGITGLTQALPDLSEYQINKLLLSRAMPSLDDLLSIQAQINAAQHTHQLTGAVHAAA
TLYEQQLYLFEDVGRHNALDKLIGWQLHHKVEVDYVLMTSRLSIELVQKSIRSRIPWLIGMSAPTSTAVRVAERYGLGLA
GFLRDNRVTYYAGYADS

Sequences:

>Translated_337_residues
MANKPHLAAEDSFKKDAPLSRLHVAYKHSYASDTFLDAAKKAPLDIDTKSGMLAVEAAVAIVINGIHYAVLMASPYQLEY
LAIGFLYSEGLIQHSHELLDWDITQLTDDESYQDFTPDSFIQNSSNKDSLNSNVTDELISLDQLSEQLQDYDIYVVELVL
NQRCHQRIQAQKRQLAGRTGCGMCGITGLTQALPDLSEYQINKLLLSRAMPSLDDLLSIQAQINAAQHTHQLTGAVHAAA
TLYEQQLYLFEDVGRHNALDKLIGWQLHHKVEVDYVLMTSRLSIELVQKSIRSRIPWLIGMSAPTSTAVRVAERYGLGLA
GFLRDNRVTYYAGYADS
>Mature_336_residues
ANKPHLAAEDSFKKDAPLSRLHVAYKHSYASDTFLDAAKKAPLDIDTKSGMLAVEAAVAIVINGIHYAVLMASPYQLEYL
AIGFLYSEGLIQHSHELLDWDITQLTDDESYQDFTPDSFIQNSSNKDSLNSNVTDELISLDQLSEQLQDYDIYVVELVLN
QRCHQRIQAQKRQLAGRTGCGMCGITGLTQALPDLSEYQINKLLLSRAMPSLDDLLSIQAQINAAQHTHQLTGAVHAAAT
LYEQQLYLFEDVGRHNALDKLIGWQLHHKVEVDYVLMTSRLSIELVQKSIRSRIPWLIGMSAPTSTAVRVAERYGLGLAG
FLRDNRVTYYAGYADS

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=289, Percent_Identity=34.6020761245675, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 37630; Mature: 37499

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANKPHLAAEDSFKKDAPLSRLHVAYKHSYASDTFLDAAKKAPLDIDTKSGMLAVEAAVA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH
IVINGIHYAVLMASPYQLEYLAIGFLYSEGLIQHSHELLDWDITQLTDDESYQDFTPDSF
HHHHHHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHH
IQNSSNKDSLNSNVTDELISLDQLSEQLQDYDIYVVELVLNQRCHQRIQAQKRQLAGRTG
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
CGMCGITGLTQALPDLSEYQINKLLLSRAMPSLDDLLSIQAQINAAQHTHQLTGAVHAAA
CCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLYEQQLYLFEDVGRHNALDKLIGWQLHHKVEVDYVLMTSRLSIELVQKSIRSRIPWLIG
HHHHHHHHHHHHHCCHHHHHHHHCHHHHCEEEEEEEEEEHHHHHHHHHHHHHHHCCEEEE
MSAPTSTAVRVAERYGLGLAGFLRDNRVTYYAGYADS
CCCCCHHHHHHHHHHCCCHHHEEECCEEEEEECCCCC
>Mature Secondary Structure 
ANKPHLAAEDSFKKDAPLSRLHVAYKHSYASDTFLDAAKKAPLDIDTKSGMLAVEAAVA
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH
IVINGIHYAVLMASPYQLEYLAIGFLYSEGLIQHSHELLDWDITQLTDDESYQDFTPDSF
HHHHHHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHH
IQNSSNKDSLNSNVTDELISLDQLSEQLQDYDIYVVELVLNQRCHQRIQAQKRQLAGRTG
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
CGMCGITGLTQALPDLSEYQINKLLLSRAMPSLDDLLSIQAQINAAQHTHQLTGAVHAAA
CCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLYEQQLYLFEDVGRHNALDKLIGWQLHHKVEVDYVLMTSRLSIELVQKSIRSRIPWLIG
HHHHHHHHHHHHHCCHHHHHHHHCHHHHCEEEEEEEEEEHHHHHHHHHHHHHHHCCEEEE
MSAPTSTAVRVAERYGLGLAGFLRDNRVTYYAGYADS
CCCCCHHHHHHHHHHCCCHHHEEECCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]