Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is terA [H]
Identifier: 93005593
GI number: 93005593
Start: 898091
End: 899374
Strand: Direct
Name: terA [H]
Synonym: Pcryo_0763
Alternate gene names: 93005593
Gene position: 898091-899374 (Clockwise)
Preceding gene: 93005581
Following gene: 93005594
Centisome position: 29.35
GC content: 44.63
Gene sequence:
>1284_bases ATGAGTCAACCTCAAGCTTTAATTGCAGGTGCTAACGCACCGCTGCCAACGGATAATATTAGCATTCGTATTTTAAGCCA AAATGCCATCGACTGTGCGGCTTATCGCCTGACGACTGAAGGTAAAGTACGCGGCGATGGCGATATGATATTTTATGGGC AGACGCGTAGCGATGATGGTAGCGTGAGCTTTCGCGGTCATGACAGTGATGGATTTTTTGATATCAATCTACCTGCACAG CCAGCAACTATTGAAAAGATTGCGTTAGCATTTTCTAGTGCGCAGACGTTGGCTCAAGTCGGTGATGTGGATATTCAAGT ACTACAAGGCAGTCAAGTGTTGATAACTTGCCAATTAAGTGCTGTTGGACGTAATGAAAAAGCTATCATCTTAGCTGAAT GTTATCGTCGGCAGGGCAATTGGAAGTTCCGATTTATCGCTCAAGGTTTTGAAGGTGGCTTAAAACCTTTATCTGAGCAT TTCGGTGTAGAGATTGCCGATGAAGCACCAGCTCAAAGCCCTATACAAAATCAGTCACAAGGGCAAGCTCAGCCTATTAA TACGCAGCGACCAATCAATACGCAAAAAGCTAGTAGTGCGCCTCAGACAACTACGCCACCGCCGATTCCTGCTGGCTCTA CCAATCCTTCAATCAACCTAAGTAAAATTACTTTAACCAAAAATCAATCTAGTATCAATCTCAAGAAACGTGATGATTTT GGCAAAATATCGGTCAACCTAGACTGGAACCAACGTCCAGATGTCAGCAAGCAAGCACCCAAAAAAGGGCTGCTTGGCGA TTTATTTAAGCAGCATAAAGCTGGTGGAATTGATCTCGATGTTGGTGCGATGATTCATCTGAAAAATGGTGAAAAAACGC TTATTCAAGCGTTGGGAAGTCGTTTTGGTAGCCTACAGTCAGCGCCATACGTTCTATTGCGTGCCGATGATAGAACAGGA CAGGTAAGCGGCGGTGAATGGCTAGATATCAATGGGCAACAGTGGTCACAGATTGAAGAAGTATTTATCTTTGCTTTCAT TTACGAAGGCGCACCAAATTGGGCGCAAACTGATGGGGTAGTGACTATTCATGTACCCGACCAGCCACCGATTGAAACGC GTTTGACAGAAGGTACAGGTAACTTACCGATGTGCGCTATTGCGCGTCTGGTCAATCAGCAAGGCAGTATCAACGTTGAA CGTATCAACCAATACTTTAAAGGACATCAAGAGATGGACAAAGCCTTTAATTGGGGCTTTAGCTGGAAACGTGGCAGTAA GTAG
Upstream 100 bases:
>100_bases TGCTGGTTCTGATTAAGGTTGTAATGCCATCCATGCTACTATATGGCGATAGTTAACCTCACTCATATAAGTAAATAATA AATAACGTAAAGGATAAATG
Downstream 100 bases:
>100_bases TCGTATGAGCTGACCTTGTCTTATTGCTGAAGTCTTAAACTAGTGATGGTTTGAAAAACCGTTACTAGTTTAGTTATTGG CGCCAAGACAAAGCTGATAT
Product: stress protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MSQPQALIAGANAPLPTDNISIRILSQNAIDCAAYRLTTEGKVRGDGDMIFYGQTRSDDGSVSFRGHDSDGFFDINLPAQ PATIEKIALAFSSAQTLAQVGDVDIQVLQGSQVLITCQLSAVGRNEKAIILAECYRRQGNWKFRFIAQGFEGGLKPLSEH FGVEIADEAPAQSPIQNQSQGQAQPINTQRPINTQKASSAPQTTTPPPIPAGSTNPSINLSKITLTKNQSSINLKKRDDF GKISVNLDWNQRPDVSKQAPKKGLLGDLFKQHKAGGIDLDVGAMIHLKNGEKTLIQALGSRFGSLQSAPYVLLRADDRTG QVSGGEWLDINGQQWSQIEEVFIFAFIYEGAPNWAQTDGVVTIHVPDQPPIETRLTEGTGNLPMCAIARLVNQQGSINVE RINQYFKGHQEMDKAFNWGFSWKRGSK
Sequences:
>Translated_427_residues MSQPQALIAGANAPLPTDNISIRILSQNAIDCAAYRLTTEGKVRGDGDMIFYGQTRSDDGSVSFRGHDSDGFFDINLPAQ PATIEKIALAFSSAQTLAQVGDVDIQVLQGSQVLITCQLSAVGRNEKAIILAECYRRQGNWKFRFIAQGFEGGLKPLSEH FGVEIADEAPAQSPIQNQSQGQAQPINTQRPINTQKASSAPQTTTPPPIPAGSTNPSINLSKITLTKNQSSINLKKRDDF GKISVNLDWNQRPDVSKQAPKKGLLGDLFKQHKAGGIDLDVGAMIHLKNGEKTLIQALGSRFGSLQSAPYVLLRADDRTG QVSGGEWLDINGQQWSQIEEVFIFAFIYEGAPNWAQTDGVVTIHVPDQPPIETRLTEGTGNLPMCAIARLVNQQGSINVE RINQYFKGHQEMDKAFNWGFSWKRGSK >Mature_426_residues SQPQALIAGANAPLPTDNISIRILSQNAIDCAAYRLTTEGKVRGDGDMIFYGQTRSDDGSVSFRGHDSDGFFDINLPAQP ATIEKIALAFSSAQTLAQVGDVDIQVLQGSQVLITCQLSAVGRNEKAIILAECYRRQGNWKFRFIAQGFEGGLKPLSEHF GVEIADEAPAQSPIQNQSQGQAQPINTQRPINTQKASSAPQTTTPPPIPAGSTNPSINLSKITLTKNQSSINLKKRDDFG KISVNLDWNQRPDVSKQAPKKGLLGDLFKQHKAGGIDLDVGAMIHLKNGEKTLIQALGSRFGSLQSAPYVLLRADDRTGQ VSGGEWLDINGQQWSQIEEVFIFAFIYEGAPNWAQTDGVVTIHVPDQPPIETRLTEGTGNLPMCAIARLVNQQGSINVER INQYFKGHQEMDKAFNWGFSWKRGSK
Specific function: Not yet known [H]
COG id: COG4110
COG function: function code R; Uncharacterized protein involved in stress response
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017115 - InterPro: IPR019303 - InterPro: IPR003325 [H]
Pfam domain/function: PF10138 Tellurium_res; PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 46585; Mature: 46454
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPQALIAGANAPLPTDNISIRILSQNAIDCAAYRLTTEGKVRGDGDMIFYGQTRSDDG CCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEEEECCCEEECCCCEEEEECCCCCCC SVSFRGHDSDGFFDINLPAQPATIEKIALAFSSAQTLAQVGDVDIQVLQGSQVLITCQLS EEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEEE AVGRNEKAIILAECYRRQGNWKFRFIAQGFEGGLKPLSEHFGVEIADEAPAQSPIQNQSQ ECCCCCCEEEEEHHHHHCCCEEEEEEECCCCCCHHHHHHHCCEEEECCCCCCCCCCCCCC GQAQPINTQRPINTQKASSAPQTTTPPPIPAGSTNPSINLSKITLTKNQSSINLKKRDDF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCC GKISVNLDWNQRPDVSKQAPKKGLLGDLFKQHKAGGIDLDVGAMIHLKNGEKTLIQALGS CEEEEEECCCCCCCCCHHCCCCCHHHHHHHHHCCCCCEEECCEEEEEECCCHHHHHHHHH RFGSLQSAPYVLLRADDRTGQVSGGEWLDINGQQWSQIEEVFIFAFIYEGAPNWAQTDGV HHCCCCCCCEEEEEECCCCCCCCCCCEEEECCHHHHHHHHEEEEEEEECCCCCCCCCCCE VTIHVPDQPPIETRLTEGTGNLPMCAIARLVNQQGSINVERINQYFKGHQEMDKAFNWGF EEEECCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHCHHHHHHHHCCCC SWKRGSK CCCCCCC >Mature Secondary Structure SQPQALIAGANAPLPTDNISIRILSQNAIDCAAYRLTTEGKVRGDGDMIFYGQTRSDDG CCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEEEECCCEEECCCCEEEEECCCCCCC SVSFRGHDSDGFFDINLPAQPATIEKIALAFSSAQTLAQVGDVDIQVLQGSQVLITCQLS EEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEEE AVGRNEKAIILAECYRRQGNWKFRFIAQGFEGGLKPLSEHFGVEIADEAPAQSPIQNQSQ ECCCCCCEEEEEHHHHHCCCEEEEEEECCCCCCHHHHHHHCCEEEECCCCCCCCCCCCCC GQAQPINTQRPINTQKASSAPQTTTPPPIPAGSTNPSINLSKITLTKNQSSINLKKRDDF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCC GKISVNLDWNQRPDVSKQAPKKGLLGDLFKQHKAGGIDLDVGAMIHLKNGEKTLIQALGS CEEEEEECCCCCCCCCHHCCCCCHHHHHHHHHCCCCCEEECCEEEEEECCCHHHHHHHHH RFGSLQSAPYVLLRADDRTGQVSGGEWLDINGQQWSQIEEVFIFAFIYEGAPNWAQTDGV HHCCCCCCCEEEEEECCCCCCCCCCCEEEECCHHHHHHHHEEEEEEEECCCCCCCCCCCE VTIHVPDQPPIETRLTEGTGNLPMCAIARLVNQQGSINVERINQYFKGHQEMDKAFNWGF EEEECCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHCHHHHHHHHCCCC SWKRGSK CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3049247 [H]