Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is catD [H]
Identifier: 93005581
GI number: 93005581
Start: 883603
End: 884415
Strand: Direct
Name: catD [H]
Synonym: Pcryo_0751
Alternate gene names: 93005581
Gene position: 883603-884415 (Clockwise)
Preceding gene: 93005579
Following gene: 93005593
Centisome position: 28.88
GC content: 44.16
Gene sequence:
>813_bases ATGCCAATGATTCATGTCAATGATATCGATATTTATTATGAAGACAGCGCGCCAAACGATAAGCAAAAGCCCATCATGGT ATTCGCCCATGGTTTGCTATGGAATACGCGTATGTTTGACAATCAAGTCGAGTATTTTAAAGCGGGTTATCGCTGTATTG CGTTTGATTTTCGGGGACAAGGTCAGTCTGAAATTACCAAATCTGGCTATGATATGGAAACCTTAACTGAAGATACGCTG GCGTTGTTAGATGCGCTAGATATTCAGCAGTGTCATTTTTTAGGACTATCAATGGGTGGATTTGTCGCCCAACGTATTGC GTTAAAGCGTCCTGAATTATTGCTATCACTGACGCTGCTTGAAACCTCTGCTGATCCTGAAGATCCTAAAAACGTGCCAC AGTACCGCAAGCTGATTAAAGCCATTCGTTGGTTGGGCATGAAGCGTGTCAGCCAAAAAGTAATGCCCATTATGTTTGGC AGCAGTTTTTTAGCAGATAAATCGCGTAAAACTGACCGTAGAGAGTGGTTGTCTATGTTGCAAAGCAATCGTAAGGGCGG GGTCATCAAGGCAACTACTGGCGTGATTGAGCGCTCTGCAACGTATGATCAGCTCAGTGATATCAAGACGCCGACGCTTA TCATCGTTGGCGATGAAGATGTGGCAACACCGTATGCAAAAGCTGAGCGCATGCACTTTGCGATAGCAGGCTCTAAGCTG GTGGTGATTAAAGGTGCGGGGCATACGGCAACGGTTGAAGAGCCGGAGCAAGTTAATAAAGCTATTAATAAGTTTTTGGT AAACTTTATATAG
Upstream 100 bases:
>100_bases TCATTCAAAAATAAGGCTACTATCTGTAAGAGGGTTGAATTATTCTAGAAGACAGATTTCAAAAGGTTTTATTTTTTATC ACACCAACAAGGAAGTGGTT
Downstream 100 bases:
>100_bases TGTTCATTTCGGATCTATATACCTGATATAACAGCGTTTATTATCGCAAAAAATGTAGAAAAAAAGCCGTTATCATGGAT TTGATAACGGCTTTTTTAAC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MPMIHVNDIDIYYEDSAPNDKQKPIMVFAHGLLWNTRMFDNQVEYFKAGYRCIAFDFRGQGQSEITKSGYDMETLTEDTL ALLDALDIQQCHFLGLSMGGFVAQRIALKRPELLLSLTLLETSADPEDPKNVPQYRKLIKAIRWLGMKRVSQKVMPIMFG SSFLADKSRKTDRREWLSMLQSNRKGGVIKATTGVIERSATYDQLSDIKTPTLIIVGDEDVATPYAKAERMHFAIAGSKL VVIKGAGHTATVEEPEQVNKAINKFLVNFI
Sequences:
>Translated_270_residues MPMIHVNDIDIYYEDSAPNDKQKPIMVFAHGLLWNTRMFDNQVEYFKAGYRCIAFDFRGQGQSEITKSGYDMETLTEDTL ALLDALDIQQCHFLGLSMGGFVAQRIALKRPELLLSLTLLETSADPEDPKNVPQYRKLIKAIRWLGMKRVSQKVMPIMFG SSFLADKSRKTDRREWLSMLQSNRKGGVIKATTGVIERSATYDQLSDIKTPTLIIVGDEDVATPYAKAERMHFAIAGSKL VVIKGAGHTATVEEPEQVNKAINKFLVNFI >Mature_269_residues PMIHVNDIDIYYEDSAPNDKQKPIMVFAHGLLWNTRMFDNQVEYFKAGYRCIAFDFRGQGQSEITKSGYDMETLTEDTLA LLDALDIQQCHFLGLSMGGFVAQRIALKRPELLLSLTLLETSADPEDPKNVPQYRKLIKAIRWLGMKRVSQKVMPIMFGS SFLADKSRKTDRREWLSMLQSNRKGGVIKATTGVIERSATYDQLSDIKTPTLIIVGDEDVATPYAKAERMHFAIAGSKLV VIKGAGHTATVEEPEQVNKAINKFLVNFI
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI218777837, Length=287, Percent_Identity=23.3449477351916, Blast_Score=72, Evalue=5e-13, Organism=Escherichia coli, GI87081721, Length=280, Percent_Identity=26.0714285714286, Blast_Score=67, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 30440; Mature: 30308
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMIHVNDIDIYYEDSAPNDKQKPIMVFAHGLLWNTRMFDNQVEYFKAGYRCIAFDFRGQ CCEEEEECEEEEECCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHCCCEEEEEEECCC GQSEITKSGYDMETLTEDTLALLDALDIQQCHFLGLSMGGFVAQRIALKRPELLLSLTLL CHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHCCCHHEEEEEEE ETSADPEDPKNVPQYRKLIKAIRWLGMKRVSQKVMPIMFGSSFLADKSRKTDRREWLSML ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHH QSNRKGGVIKATTGVIERSATYDQLSDIKTPTLIIVGDEDVATPYAKAERMHFAIAGSKL HCCCCCCEEEEEHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHEEEEEECCEE VVIKGAGHTATVEEPEQVNKAINKFLVNFI EEEECCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PMIHVNDIDIYYEDSAPNDKQKPIMVFAHGLLWNTRMFDNQVEYFKAGYRCIAFDFRGQ CEEEEECEEEEECCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHCCCEEEEEEECCC GQSEITKSGYDMETLTEDTLALLDALDIQQCHFLGLSMGGFVAQRIALKRPELLLSLTLL CHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHCCCHHEEEEEEE ETSADPEDPKNVPQYRKLIKAIRWLGMKRVSQKVMPIMFGSSFLADKSRKTDRREWLSML ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHH QSNRKGGVIKATTGVIERSATYDQLSDIKTPTLIIVGDEDVATPYAKAERMHFAIAGSKL HCCCCCCEEEEEHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHEEEEEECCEE VVIKGAGHTATVEEPEQVNKAINKFLVNFI EEEECCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]