Definition Psychrobacter cryohalolentis K5 chromosome, complete genome.
Accession NC_007969
Length 3,059,876

Click here to switch to the map view.

The map label for this gene is 93005579

Identifier: 93005579

GI number: 93005579

Start: 881658

End: 882248

Strand: Direct

Name: 93005579

Synonym: Pcryo_0749

Alternate gene names: NA

Gene position: 881658-882248 (Clockwise)

Preceding gene: 93005578

Following gene: 93005581

Centisome position: 28.81

GC content: 41.46

Gene sequence:

>591_bases
ATGGCTGGTTTCTCTTATTATCTTATGTATAATATGGGAGCAGGCGGAAACCGTGGCTCTGTATGTTATTTCTCCTTTTC
TATCTCGGGACGGACCGATACTTTGATAGGCACTTTTTGTTTGCAATCAAGTGCTTTGGAGTTTTGGTTGATTACTTTAT
CCCCCATCAAACGTCGCATTGTCTATGTGACTGTCTTTGAAATCATTGCTATCATTTCATCTACCTTGGTTCTTATGCTG
TTGAGTAACAGCAGCGCCGCAGAATCTCTACCAGTTGCCGTGATGGTCTCATTGGCAGCGGTGATTTGGAATTTTATTTA
CAATACGGCATTTGAAAACTGGGAACGTCGTAAGCAGGTGCCGCAGCGCACGTTATTGGTACGTAGTGCCCATGCGATAG
GTTTTGAAGGCGGGTTGGTTCTGATTTGCCTACCGCTATATATGATTTGGTATGATGTTGGTTTTATCAAAGCCTTTATG
ATGGAAGCCGCGCTATTGCTGTTTTTCTTGGTTTATACTTTTTTCTTTACCTTGGGTTTTGACAAAATATTTACCTTACC
ACATCACTATAAAAGTGCTTCTGCTTCTTGA

Upstream 100 bases:

>100_bases
ACTAAGCCCTGTACAATACAGAACTCAGTCCTTGATTTAATTAAACTGTCCAAGTTTAGGGGGTCAGTTCAATTGATTGC
GGGGTTTTTTGCTGTGAGCA

Downstream 100 bases:

>100_bases
TAAATAAAGAGGTCAATGGGAATAATTTTGACCATTAATTATATAATTTATCCAAAATAAAAGGCTACCTAATGGCAGCC
TTTCGAATGATATTTAGTAG

Product: transmembrane pair

Products: NA

Alternate protein names: Transmembrane Pair Domain Protein; Transmembrane Pair; Bacterial Transmembrane Pair Family; Transmembrane Pair Permease Of Facilitator Superfamily; Transmembrane Protein; Transmembrane Pair Family Protein; Bacterial Transmembrane Pair Family Protein

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MAGFSYYLMYNMGAGGNRGSVCYFSFSISGRTDTLIGTFCLQSSALEFWLITLSPIKRRIVYVTVFEIIAIISSTLVLML
LSNSSAAESLPVAVMVSLAAVIWNFIYNTAFENWERRKQVPQRTLLVRSAHAIGFEGGLVLICLPLYMIWYDVGFIKAFM
MEAALLLFFLVYTFFFTLGFDKIFTLPHHYKSASAS

Sequences:

>Translated_196_residues
MAGFSYYLMYNMGAGGNRGSVCYFSFSISGRTDTLIGTFCLQSSALEFWLITLSPIKRRIVYVTVFEIIAIISSTLVLML
LSNSSAAESLPVAVMVSLAAVIWNFIYNTAFENWERRKQVPQRTLLVRSAHAIGFEGGLVLICLPLYMIWYDVGFIKAFM
MEAALLLFFLVYTFFFTLGFDKIFTLPHHYKSASAS
>Mature_195_residues
AGFSYYLMYNMGAGGNRGSVCYFSFSISGRTDTLIGTFCLQSSALEFWLITLSPIKRRIVYVTVFEIIAIISSTLVLMLL
SNSSAAESLPVAVMVSLAAVIWNFIYNTAFENWERRKQVPQRTLLVRSAHAIGFEGGLVLICLPLYMIWYDVGFIKAFMM
EAALLLFFLVYTFFFTLGFDKIFTLPHHYKSASAS

Specific function: Unknown

COG id: COG4125

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22082; Mature: 21951

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGFSYYLMYNMGAGGNRGSVCYFSFSISGRTDTLIGTFCLQSSALEFWLITLSPIKRRI
CCCEEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEHHHHHHH
VYVTVFEIIAIISSTLVLMLLSNSSAAESLPVAVMVSLAAVIWNFIYNTAFENWERRKQV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PQRTLLVRSAHAIGFEGGLVLICLPLYMIWYDVGFIKAFMMEAALLLFFLVYTFFFTLGF
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
DKIFTLPHHYKSASAS
HHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AGFSYYLMYNMGAGGNRGSVCYFSFSISGRTDTLIGTFCLQSSALEFWLITLSPIKRRI
CCEEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEHHHHHHH
VYVTVFEIIAIISSTLVLMLLSNSSAAESLPVAVMVSLAAVIWNFIYNTAFENWERRKQV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PQRTLLVRSAHAIGFEGGLVLICLPLYMIWYDVGFIKAFMMEAALLLFFLVYTFFFTLGF
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
DKIFTLPHHYKSASAS
HHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA