| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is icd2 [H]
Identifier: 93005146
GI number: 93005146
Start: 380810
End: 383029
Strand: Reverse
Name: icd2 [H]
Synonym: Pcryo_0315
Alternate gene names: 93005146
Gene position: 383029-380810 (Counterclockwise)
Preceding gene: 93005150
Following gene: 93005144
Centisome position: 12.52
GC content: 43.78
Gene sequence:
>2220_bases ATGTCAAAAATTATTTATACAAAAACCGACGAAGCCCCAGCGCTTGCAACCGTATCATTCTTGCCTATTGTCAAAGCATT TACTCACACAGCAGGCATTGAAGTTGACACCAGTGATATCTCAGTTGCTGCGCGTGTATTGGCTGAATTCCCTGAGTTTT TAAGTGAAGAGCAACGCGTTCCTGATAACTTAGCTGAGCTAGGTCGTCTGACACAAGATCCAAACACCAACATCATTAAA CTGCCAAATATCAGTGCTTCTGTTCAACAGTTGAAAGCAGCTATTAAAGAGCTACAAGGTAAAGGCTACGCTATTCCTGA TTTTCCAGATGACCCAAAAACTGACGAAGAAAAATCGATTCGTCTGCGTTATGGCAAAAGTCTAGGCAGCTCGGTAAACC CTGTACTTCGTGAAGGTAACTCAGATCGCCGCGCACCAAAAGCGGTCAAAAACTACGCACGCAAACATCCGCATTCTATG GGTGAATGGAAACAATGGTCACAAACGCATGTATCACATATGCACAGCGGCGACTTCTATGATGGCGAGCAATCTATCAC TTTAGATAAAGCGCGTACTGTACGTATGGAACGCTTAGCGGACGATGGCACTGTAAATGTATTCAAAACAGGCATCGCTT TGCTTGATAAAGAAGTCATCGATCTTATGTTTATGAGCAAAAAATCACTGCTTGATTTTTATGAGCGTGAAATGGAAGAC TGCCGTGAAGCTGGTATCTTATTCTCGTTGCACGTAAAAGCGACCATGATGAAAGTATCACACCCTATCGTCTTCGGTCA TGCGGTCAGAATCTACTATAAAGATGCTTTCCAAAAGCATGGCGCATTATTTGACGAGCTAGGTGTCAATGTTAATAACG GCATGGCAAGTTTGTATGAAAAAATTGCCGAGTTGCCAGCCAGTTTGCGTGAAGAGATTGAGCGTGATCTACATGCTTGC CAAGTCCACCGCCCACGTTTGGCGATGGTTGATTCATCAAAAGGCATCACCAACTTCCATTCGCCAAGTGACATCATCGT TGATGCATCCATGCCAGCTATGATTCGTAACGGCGGAAAAATGTGGGGTGCTGATGGTAAACTATATGACTGTAAAGCTG TCATGCCAGAATCTACCTTTGCCCGCATTTATCAAGAAATGATCAATTTCTGCAAATGGCATGGCAACTTTGATCCAACA ACGATGGGTACAGTACCTAACGTCGGTCTAATGGCTCAAAAAGCGGAAGAATATGGCTCACACGACAAGACTTTTGAAGC GAGCGATAACGGTATTGCTCGTATTGTTGACGAAGAAACAAATGAAATCTTGCTTGAGCAGCGTGTTGAAAAAGGTGATA TCTGGCGCATGTGTCAGGTTAAAGATGAGCCTATCCAAGATTGGGTCAAGCTTGCAGTACGCCGTGCACGCGAATCGAAT ACACCAGTTATCTTTTGGTTAGACCCGTATCGTCCACACGAAAACGAGCTGATCAAAAAGGTAAAAATGTATTTAAAAGA TCATGATACCACTGGTCTACATATCGAAACCATGTCACAAGTTCGTGCCATGCGTTATACCTTAGAGCGCGTTGCTCGTG GTCTTGATACGATTTCTGCTACTGGTAATATCTTACGTGATTATCTCACTGACTTATTCCCGATTTTAGAATTGGGCACC AGTGCTAAGATGTTGTCAGTGGTTCCATTAATGAAGGGCGGCGGTTTGTTTGAAACAGGCGCTGGCGGTTCAGCACCAAA GCATGTACAACAATTGGTTGAAGAAAACCACTTACGTTGGGATTCTTTGGGTGAGTTCTTGGCATTGACTGTGTCGCTAG AGCATTTAGCACAGAATGACAACAACCCTAAAGCTCAGGTATTGGCTGATACCTTAGATAGAGCAACTGAAAAGCTGTTA TTGAATGACAAGTCTCCATCACGCAAAACTGGTGAGCTTGACAATCGTGGCAGTCACTTCTATCTTGCGATGTATTGGGC ACAAGAGCTTGCCGCTCAAGAGCAAGACGGCGAGCTAAAAGCACAATTTACCGCACTTGCGCAGAATCTTGAGAGCAATG AAGCAGCTATTATCAAAGAGCTAAATGATGCTCAAGGTAAGCCTATGGATCTTAAAGGCTATTACCTAGCGGATGAAGCA TTGGCTGAGCAAGCAATGCGTCCTAGCACTTTGTTCAATAACGCCATTGCTTCATTATAA
Upstream 100 bases:
>100_bases GCCATCACTCATTATGGTATGAAGGCTATATAAAGCGATTAAATAAGATCCAAGCCTTACTCCCCTTATTAATGACAACA TAAAGGAATACTCTACTACA
Downstream 100 bases:
>100_bases TTAACCCATCTTATAAAAGTTAATTTATAGAAGTGACATTAGCGTAAAAAAAACACCCCAAATATCTTAGATTTTGGGGT GTTTTTTTGTCTTTTATTAA
Product: isocitrate dehydrogenase, NADP-dependent
Products: NA
Alternate protein names: IDH-II; IDP-2; NADP+-specific ICDH 2; Oxalosuccinate decarboxylase 2 [H]
Number of amino acids: Translated: 739; Mature: 738
Protein sequence:
>739_residues MSKIIYTKTDEAPALATVSFLPIVKAFTHTAGIEVDTSDISVAARVLAEFPEFLSEEQRVPDNLAELGRLTQDPNTNIIK LPNISASVQQLKAAIKELQGKGYAIPDFPDDPKTDEEKSIRLRYGKSLGSSVNPVLREGNSDRRAPKAVKNYARKHPHSM GEWKQWSQTHVSHMHSGDFYDGEQSITLDKARTVRMERLADDGTVNVFKTGIALLDKEVIDLMFMSKKSLLDFYEREMED CREAGILFSLHVKATMMKVSHPIVFGHAVRIYYKDAFQKHGALFDELGVNVNNGMASLYEKIAELPASLREEIERDLHAC QVHRPRLAMVDSSKGITNFHSPSDIIVDASMPAMIRNGGKMWGADGKLYDCKAVMPESTFARIYQEMINFCKWHGNFDPT TMGTVPNVGLMAQKAEEYGSHDKTFEASDNGIARIVDEETNEILLEQRVEKGDIWRMCQVKDEPIQDWVKLAVRRARESN TPVIFWLDPYRPHENELIKKVKMYLKDHDTTGLHIETMSQVRAMRYTLERVARGLDTISATGNILRDYLTDLFPILELGT SAKMLSVVPLMKGGGLFETGAGGSAPKHVQQLVEENHLRWDSLGEFLALTVSLEHLAQNDNNPKAQVLADTLDRATEKLL LNDKSPSRKTGELDNRGSHFYLAMYWAQELAAQEQDGELKAQFTALAQNLESNEAAIIKELNDAQGKPMDLKGYYLADEA LAEQAMRPSTLFNNAIASL
Sequences:
>Translated_739_residues MSKIIYTKTDEAPALATVSFLPIVKAFTHTAGIEVDTSDISVAARVLAEFPEFLSEEQRVPDNLAELGRLTQDPNTNIIK LPNISASVQQLKAAIKELQGKGYAIPDFPDDPKTDEEKSIRLRYGKSLGSSVNPVLREGNSDRRAPKAVKNYARKHPHSM GEWKQWSQTHVSHMHSGDFYDGEQSITLDKARTVRMERLADDGTVNVFKTGIALLDKEVIDLMFMSKKSLLDFYEREMED CREAGILFSLHVKATMMKVSHPIVFGHAVRIYYKDAFQKHGALFDELGVNVNNGMASLYEKIAELPASLREEIERDLHAC QVHRPRLAMVDSSKGITNFHSPSDIIVDASMPAMIRNGGKMWGADGKLYDCKAVMPESTFARIYQEMINFCKWHGNFDPT TMGTVPNVGLMAQKAEEYGSHDKTFEASDNGIARIVDEETNEILLEQRVEKGDIWRMCQVKDEPIQDWVKLAVRRARESN TPVIFWLDPYRPHENELIKKVKMYLKDHDTTGLHIETMSQVRAMRYTLERVARGLDTISATGNILRDYLTDLFPILELGT SAKMLSVVPLMKGGGLFETGAGGSAPKHVQQLVEENHLRWDSLGEFLALTVSLEHLAQNDNNPKAQVLADTLDRATEKLL LNDKSPSRKTGELDNRGSHFYLAMYWAQELAAQEQDGELKAQFTALAQNLESNEAAIIKELNDAQGKPMDLKGYYLADEA LAEQAMRPSTLFNNAIASL >Mature_738_residues SKIIYTKTDEAPALATVSFLPIVKAFTHTAGIEVDTSDISVAARVLAEFPEFLSEEQRVPDNLAELGRLTQDPNTNIIKL PNISASVQQLKAAIKELQGKGYAIPDFPDDPKTDEEKSIRLRYGKSLGSSVNPVLREGNSDRRAPKAVKNYARKHPHSMG EWKQWSQTHVSHMHSGDFYDGEQSITLDKARTVRMERLADDGTVNVFKTGIALLDKEVIDLMFMSKKSLLDFYEREMEDC REAGILFSLHVKATMMKVSHPIVFGHAVRIYYKDAFQKHGALFDELGVNVNNGMASLYEKIAELPASLREEIERDLHACQ VHRPRLAMVDSSKGITNFHSPSDIIVDASMPAMIRNGGKMWGADGKLYDCKAVMPESTFARIYQEMINFCKWHGNFDPTT MGTVPNVGLMAQKAEEYGSHDKTFEASDNGIARIVDEETNEILLEQRVEKGDIWRMCQVKDEPIQDWVKLAVRRARESNT PVIFWLDPYRPHENELIKKVKMYLKDHDTTGLHIETMSQVRAMRYTLERVARGLDTISATGNILRDYLTDLFPILELGTS AKMLSVVPLMKGGGLFETGAGGSAPKHVQQLVEENHLRWDSLGEFLALTVSLEHLAQNDNNPKAQVLADTLDRATEKLLL NDKSPSRKTGELDNRGSHFYLAMYWAQELAAQEQDGELKAQFTALAQNLESNEAAIIKELNDAQGKPMDLKGYYLADEAL AEQAMRPSTLFNNAIASL
Specific function: Unknown
COG id: COG2838
COG function: function code C; Monomeric isocitrate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monomeric-type IDH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001804 - InterPro: IPR004436 [H]
Pfam domain/function: PF03971 IDH [H]
EC number: =1.1.1.42 [H]
Molecular weight: Translated: 82921; Mature: 82790
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIIYTKTDEAPALATVSFLPIVKAFTHTAGIEVDTSDISVAARVLAEFPEFLSEEQRV CCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHCC PDNLAELGRLTQDPNTNIIKLPNISASVQQLKAAIKELQGKGYAIPDFPDDPKTDEEKSI CHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH RLRYGKSLGSSVNPVLREGNSDRRAPKAVKNYARKHPHSMGEWKQWSQTHVSHMHSGDFY HEEECHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC DGEQSITLDKARTVRMERLADDGTVNVFKTGIALLDKEVIDLMFMSKKSLLDFYEREMED CCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CREAGILFSLHVKATMMKVSHPIVFGHAVRIYYKDAFQKHGALFDELGVNVNNGMASLYE HHHCCCEEEEEHHHHHHHHCCCEEEHHEEEEHHHHHHHHHCCHHHHHCCCCCCCHHHHHH KIAELPASLREEIERDLHACQVHRPRLAMVDSSKGITNFHSPSDIIVDASMPAMIRNGGK HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHHCCCC MWGADGKLYDCKAVMPESTFARIYQEMINFCKWHGNFDPTTMGTVPNVGLMAQKAEEYGS EECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC HDKTFEASDNGIARIVDEETNEILLEQRVEKGDIWRMCQVKDEPIQDWVKLAVRRARESN CCCCEECCCCCEEEEECCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCC TPVIFWLDPYRPHENELIKKVKMYLKDHDTTGLHIETMSQVRAMRYTLERVARGLDTISA CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH TGNILRDYLTDLFPILELGTSAKMLSVVPLMKGGGLFETGAGGSAPKHVQQLVEENHLRW HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCH DSLGEFLALTVSLEHLAQNDNNPKAQVLADTLDRATEKLLLNDKSPSRKTGELDNRGSHF HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE YLAMYWAQELAAQEQDGELKAQFTALAQNLESNEAAIIKELNDAQGKPMDLKGYYLADEA EEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEECHHH LAEQAMRPSTLFNNAIASL HHHHHCCCHHHHHHHHHCC >Mature Secondary Structure SKIIYTKTDEAPALATVSFLPIVKAFTHTAGIEVDTSDISVAARVLAEFPEFLSEEQRV CCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHCC PDNLAELGRLTQDPNTNIIKLPNISASVQQLKAAIKELQGKGYAIPDFPDDPKTDEEKSI CHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH RLRYGKSLGSSVNPVLREGNSDRRAPKAVKNYARKHPHSMGEWKQWSQTHVSHMHSGDFY HEEECHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC DGEQSITLDKARTVRMERLADDGTVNVFKTGIALLDKEVIDLMFMSKKSLLDFYEREMED CCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CREAGILFSLHVKATMMKVSHPIVFGHAVRIYYKDAFQKHGALFDELGVNVNNGMASLYE HHHCCCEEEEEHHHHHHHHCCCEEEHHEEEEHHHHHHHHHCCHHHHHCCCCCCCHHHHHH KIAELPASLREEIERDLHACQVHRPRLAMVDSSKGITNFHSPSDIIVDASMPAMIRNGGK HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHHCCCC MWGADGKLYDCKAVMPESTFARIYQEMINFCKWHGNFDPTTMGTVPNVGLMAQKAEEYGS EECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC HDKTFEASDNGIARIVDEETNEILLEQRVEKGDIWRMCQVKDEPIQDWVKLAVRRARESN CCCCEECCCCCEEEEECCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCC TPVIFWLDPYRPHENELIKKVKMYLKDHDTTGLHIETMSQVRAMRYTLERVARGLDTISA CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH TGNILRDYLTDLFPILELGTSAKMLSVVPLMKGGGLFETGAGGSAPKHVQQLVEENHLRW HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCH DSLGEFLALTVSLEHLAQNDNNPKAQVLADTLDRATEKLLLNDKSPSRKTGELDNRGSHF HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE YLAMYWAQELAAQEQDGELKAQFTALAQNLESNEAAIIKELNDAQGKPMDLKGYYLADEA EEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEECHHH LAEQAMRPSTLFNNAIASL HHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226630; 1295895 [H]