Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is gltS [H]
Identifier: 93005150
GI number: 93005150
Start: 387354
End: 388628
Strand: Reverse
Name: gltS [H]
Synonym: Pcryo_0319
Alternate gene names: 93005150
Gene position: 388628-387354 (Counterclockwise)
Preceding gene: 93005151
Following gene: 93005146
Centisome position: 12.7
GC content: 44.55
Gene sequence:
>1275_bases ATGGAAATCACCCTAAACGGCTATTACACCCTGATATTAGCCACATTAGTACTTTTGCTTGGACGCTTCTTAGTCAAAAG AATTAAGTTTTTAGAAGACTTCAATATTCCAGAACCAGTCGCAGGCGGTTTGGTCGCAGCGATTGTCGTTTATATTCTTA ATATTGTTTGGGGCTATAGCTTTAATTTCCATCAAGGACTGCAAACAGCGACCATGCTGATGTTTTTTGCCTCTATCGGG CTTAGCGCTGATTTTGGTCGGTTAAAAGCAGGTGGCTCACCCTTGCTGATTTTCACCATTATCGTGTCTGTTTTTATCAT TTTGCAAGACATCCTTGGTGTTGCAATGGCAAGCGCACTTGGGCTTGATCCTTTGCTTGGCTTGGTGACCGGTTCAATCG CTTTGACTGGTGGACATGGTACTGCTGGTGCTTGGGGCATTACTTTGGAGGAGCAGTATGGTGTGGTTGGCGCGACGACG CTGGGTATCGCAGTTGCCACTTATGGTTTAGTAGCAGGTGGTATTATCGGTGGTCCTGTTGCCCGTCGCTTGATTAAAAA GCTTGGTCTCAAGCCTACAGCAGACAATCCAAACCCAAGTGATGTTGAAAAACTGGCAAGTGAGCAGTCGCTCTATAGCA CCAAGCACAGCGAAGAGGAAGTTCACAGCAATAAGGAGATGTTTGAAAAACCGGATAATATCCGTCTGATTACGGCATCG TCTACCATTGAATCATTGGCACTGTTTGCCGCAGCATTGGCATTTGCTGATCTCATGACTTTGGTAGCACAGGATACATG GTTTGAGTTACCGACCTTCGTATGGGCATTAGCAGGTGGTGTGATTTTGCGCAATACCTTAACCATGGTATTTAACTTTG ATATGTTTGACCGTGCGATTGACGTCATCGGTAACGCTTCTTTGAGTCTTTTCTTAGCGATGGCATTATTGTCATTAAAG CTGTGGCAATTGACAGATTTGGCAGGTCCGGTATTGATCATCTTATTGTCACAAACTGTTCTAATGATTGGCTATGCTTA CTTTGTGACCTTCAAACTCATGGGCAAAGACTATGATGCAGCTGTCTTGTCAGCAGGACACTGTGGTTTCGGTATGGGTG CAACTCCTACAGCCATTGCCAATATGCAGGCGGTCACCGATCGTTACCTACCATCACATAAGGCATTTTTAATTGTACCT ATGGTTGGTGCATTCTTCGTTGATATCGTTAACGCGACGATCTTGCAGATATTCACCAAATTGCCATTTATGTGA
Upstream 100 bases:
>100_bases GATTTGTCTTAGTCGCTAGTAAGAGAAGAATCTAAATTCGAGATAAAAACAGATTTATCCCGAATTCAGGTTAATTTATA TTTATAGAAAGGATTAACAT
Downstream 100 bases:
>100_bases TTTGATGAAATAAAAAGCTGATTCATATACTCACAAAAAAACCGCCTAGCAAAAGCTAAGCGGTTTTTTTATTTCTGACT TATAAAACCAATTAATTAGA
Product: sodium/glutamate symporter
Products: Na (I) [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate permease [H]
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MEITLNGYYTLILATLVLLLGRFLVKRIKFLEDFNIPEPVAGGLVAAIVVYILNIVWGYSFNFHQGLQTATMLMFFASIG LSADFGRLKAGGSPLLIFTIIVSVFIILQDILGVAMASALGLDPLLGLVTGSIALTGGHGTAGAWGITLEEQYGVVGATT LGIAVATYGLVAGGIIGGPVARRLIKKLGLKPTADNPNPSDVEKLASEQSLYSTKHSEEEVHSNKEMFEKPDNIRLITAS STIESLALFAAALAFADLMTLVAQDTWFELPTFVWALAGGVILRNTLTMVFNFDMFDRAIDVIGNASLSLFLAMALLSLK LWQLTDLAGPVLIILLSQTVLMIGYAYFVTFKLMGKDYDAAVLSAGHCGFGMGATPTAIANMQAVTDRYLPSHKAFLIVP MVGAFFVDIVNATILQIFTKLPFM
Sequences:
>Translated_424_residues MEITLNGYYTLILATLVLLLGRFLVKRIKFLEDFNIPEPVAGGLVAAIVVYILNIVWGYSFNFHQGLQTATMLMFFASIG LSADFGRLKAGGSPLLIFTIIVSVFIILQDILGVAMASALGLDPLLGLVTGSIALTGGHGTAGAWGITLEEQYGVVGATT LGIAVATYGLVAGGIIGGPVARRLIKKLGLKPTADNPNPSDVEKLASEQSLYSTKHSEEEVHSNKEMFEKPDNIRLITAS STIESLALFAAALAFADLMTLVAQDTWFELPTFVWALAGGVILRNTLTMVFNFDMFDRAIDVIGNASLSLFLAMALLSLK LWQLTDLAGPVLIILLSQTVLMIGYAYFVTFKLMGKDYDAAVLSAGHCGFGMGATPTAIANMQAVTDRYLPSHKAFLIVP MVGAFFVDIVNATILQIFTKLPFM >Mature_424_residues MEITLNGYYTLILATLVLLLGRFLVKRIKFLEDFNIPEPVAGGLVAAIVVYILNIVWGYSFNFHQGLQTATMLMFFASIG LSADFGRLKAGGSPLLIFTIIVSVFIILQDILGVAMASALGLDPLLGLVTGSIALTGGHGTAGAWGITLEEQYGVVGATT LGIAVATYGLVAGGIIGGPVARRLIKKLGLKPTADNPNPSDVEKLASEQSLYSTKHSEEEVHSNKEMFEKPDNIRLITAS STIESLALFAAALAFADLMTLVAQDTWFELPTFVWALAGGVILRNTLTMVFNFDMFDRAIDVIGNASLSLFLAMALLSLK LWQLTDLAGPVLIILLSQTVLMIGYAYFVTFKLMGKDYDAAVLSAGHCGFGMGATPTAIANMQAVTDRYLPSHKAFLIVP MVGAFFVDIVNATILQIFTKLPFM
Specific function: Catalyzes the sodium-dependent uptake of extracellular glutamate [H]
COG id: COG0786
COG function: function code E; Na+/glutamate symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gltS symporter family [H]
Homologues:
Organism=Escherichia coli, GI1790085, Length=402, Percent_Identity=50.9950248756219, Blast_Score=346, Evalue=2e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004445 [H]
Pfam domain/function: PF03616 Glt_symporter [H]
EC number: NA
Molecular weight: Translated: 45476; Mature: 45476
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00134 TRYPSIN_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEITLNGYYTLILATLVLLLGRFLVKRIKFLEDFNIPEPVAGGLVAAIVVYILNIVWGYS CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC FNFHQGLQTATMLMFFASIGLSADFGRLKAGGSPLLIFTIIVSVFIILQDILGVAMASAL CCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GLDPLLGLVTGSIALTGGHGTAGAWGITLEEQYGVVGATTLGIAVATYGLVAGGIIGGPV CHHHHHHHHHCCEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH ARRLIKKLGLKPTADNPNPSDVEKLASEQSLYSTKHSEEEVHSNKEMFEKPDNIRLITAS HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHCCCCCEEEEEEC STIESLALFAAALAFADLMTLVAQDTWFELPTFVWALAGGVILRNTLTMVFNFDMFDRAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH DVIGNASLSLFLAMALLSLKLWQLTDLAGPVLIILLSQTVLMIGYAYFVTFKLMGKDYDA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AVLSAGHCGFGMGATPTAIANMQAVTDRYLPSHKAFLIVPMVGAFFVDIVNATILQIFTK HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH LPFM CCCC >Mature Secondary Structure MEITLNGYYTLILATLVLLLGRFLVKRIKFLEDFNIPEPVAGGLVAAIVVYILNIVWGYS CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC FNFHQGLQTATMLMFFASIGLSADFGRLKAGGSPLLIFTIIVSVFIILQDILGVAMASAL CCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GLDPLLGLVTGSIALTGGHGTAGAWGITLEEQYGVVGATTLGIAVATYGLVAGGIIGGPV CHHHHHHHHHCCEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH ARRLIKKLGLKPTADNPNPSDVEKLASEQSLYSTKHSEEEVHSNKEMFEKPDNIRLITAS HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHCCCCCEEEEEEC STIESLALFAAALAFADLMTLVAQDTWFELPTFVWALAGGVILRNTLTMVFNFDMFDRAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH DVIGNASLSLFLAMALLSLKLWQLTDLAGPVLIILLSQTVLMIGYAYFVTFKLMGKDYDA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AVLSAGHCGFGMGATPTAIANMQAVTDRYLPSHKAFLIVPMVGAFFVDIVNATILQIFTK HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH LPFM CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + L-glutamate [Periplasm] = Na (I) [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]