Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93005084
Identifier: 93005084
GI number: 93005084
Start: 297976
End: 299472
Strand: Direct
Name: 93005084
Synonym: Pcryo_0253
Alternate gene names: NA
Gene position: 297976-299472 (Clockwise)
Preceding gene: 93005083
Following gene: 93005085
Centisome position: 9.74
GC content: 42.08
Gene sequence:
>1497_bases ATGATAAATACGCATAAGCACACTCAAAGCTCTGAAATGAATATCATGACGGTATTTGAACATCAGCGTTTAATAGCGTC TAATTTCTTGTACGACTCTGATTTTCAGTGGCTGATAACCCAAGAGCTGTCAGTATTTAGTATTAAACGCAAGCAAGGAC AGTGGCAACTCAAGGTTGGACATTATATTGGCGTGATTGTACTGCCTAGTGGCATGACTCTTGAGATACTGCCAAAATTT ATCGCAAACACTGCTAGCAACTCTATTAAGCAGCCATATCAGTCAAATGAATCACCAGTAGATGCGGATATTGTACAAAC CCGTCACTGGGTACAAAATATGCTGTCAGACCTAATGAACAGTAATGATAACAAATCGCCTCACAGCAAAAATTTTAGGC AATTCAGCCGCCAGTTGACAGCGCTGCCAGTCACCACATTGCCTTTATCAGATTGGCTCAGTATGCAGCTTTTGCAGCGT TTAACGAATTATCAACCGACCAAACAGTATCAAACCCAAATCCATAACCAAGCAGCAATTCAAGGACGTTTACTCATAAA AGAGCAATTACGCCATAACAGTATGCAGCCACATAAATTTGTGTGTGAGCGCAGTGTGCTGAACCAAGACATGCTAGGCA ATCGAGTCATTAAGAGCGCATTAACACTGCTGAGGCCTTTGTTGCCCCAATCAAATCTGCTTTTACATTTACAGCCATGG CAGCAAGTGTCTGTCCTACATCAGCATGAAATACGCCAGCTAGAGTCGATATACTTTCAAGCAAAGCGTGAACTTGCCAT TCAGCCGCTGCAAGCAAAGCAATTACAAGCCGCCTTGCAACTGGTAGATTTCGCTTATTGGCTGCTTAGTCAATCAAATA TGGAAATCGGTCATAGTATTAATGCACCAAAACCATTTGGTAGTAGATCTACACCGCCACGCTTATGCTTACTGATAGAT ATGAATCAAGCGTTTGAGCAATGGGCAGGCCAGCGTATCGCTTTGTCTTTTCAGCAATTAAGCGACGACTATAAACCATT ATTCCAAGCGCAACGTGTTTGGCTTAATGATGCAGAAGGGCAGGCGTGTTTGTCTATTCGCCCTGATTTATTGATTTATC GCCAGATGCGTTCGAATACTAAAAATAAAGAGAAGCATGATGATACTTTACCAATAAAGAATTTACGAGCAAATCCATCA CCAGAAAAACAAGCAGGTCAATATAGTCACGTGATCGATATTAAATGGAAGCCTTTAGCGCATGCCAGCGCCATTAGTGC CAGCGACGCTTATCAACTGAGCAGCTATGCGCAGGCTTATCAAGCAGAGCAAGTCTGGCTGGTATATCCAGTGCAAGATA ATCAAAGACGAGCGGTTGTATTAAAGCAAGATACTCAGGACATATACAATAGTGAAAATGCACCCTATGCTCAGTTATGG CTGATACCTTTTAATGTGCTCACAGGTACGATAAACATTGACTTGCTTCCGACATAA
Upstream 100 bases:
>100_bases TGCCGGCAGTTATGCAATTAATACTGACCTTATTGCCAATACTGGCAAGTTCACCCAGCTTGCCGTCTATCAGCGCTTAT ATCCATGAGGATGTTAATCG
Downstream 100 bases:
>100_bases GATTTAGCATAATATGCGCTTAGCTCATAAGGCACTATGTTGAGTAGCGCTTGTTGTCGACGCTTAGTTTATAAGAAATA AGCCTTTTTTAAATAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MINTHKHTQSSEMNIMTVFEHQRLIASNFLYDSDFQWLITQELSVFSIKRKQGQWQLKVGHYIGVIVLPSGMTLEILPKF IANTASNSIKQPYQSNESPVDADIVQTRHWVQNMLSDLMNSNDNKSPHSKNFRQFSRQLTALPVTTLPLSDWLSMQLLQR LTNYQPTKQYQTQIHNQAAIQGRLLIKEQLRHNSMQPHKFVCERSVLNQDMLGNRVIKSALTLLRPLLPQSNLLLHLQPW QQVSVLHQHEIRQLESIYFQAKRELAIQPLQAKQLQAALQLVDFAYWLLSQSNMEIGHSINAPKPFGSRSTPPRLCLLID MNQAFEQWAGQRIALSFQQLSDDYKPLFQAQRVWLNDAEGQACLSIRPDLLIYRQMRSNTKNKEKHDDTLPIKNLRANPS PEKQAGQYSHVIDIKWKPLAHASAISASDAYQLSSYAQAYQAEQVWLVYPVQDNQRRAVVLKQDTQDIYNSENAPYAQLW LIPFNVLTGTINIDLLPT
Sequences:
>Translated_498_residues MINTHKHTQSSEMNIMTVFEHQRLIASNFLYDSDFQWLITQELSVFSIKRKQGQWQLKVGHYIGVIVLPSGMTLEILPKF IANTASNSIKQPYQSNESPVDADIVQTRHWVQNMLSDLMNSNDNKSPHSKNFRQFSRQLTALPVTTLPLSDWLSMQLLQR LTNYQPTKQYQTQIHNQAAIQGRLLIKEQLRHNSMQPHKFVCERSVLNQDMLGNRVIKSALTLLRPLLPQSNLLLHLQPW QQVSVLHQHEIRQLESIYFQAKRELAIQPLQAKQLQAALQLVDFAYWLLSQSNMEIGHSINAPKPFGSRSTPPRLCLLID MNQAFEQWAGQRIALSFQQLSDDYKPLFQAQRVWLNDAEGQACLSIRPDLLIYRQMRSNTKNKEKHDDTLPIKNLRANPS PEKQAGQYSHVIDIKWKPLAHASAISASDAYQLSSYAQAYQAEQVWLVYPVQDNQRRAVVLKQDTQDIYNSENAPYAQLW LIPFNVLTGTINIDLLPT >Mature_498_residues MINTHKHTQSSEMNIMTVFEHQRLIASNFLYDSDFQWLITQELSVFSIKRKQGQWQLKVGHYIGVIVLPSGMTLEILPKF IANTASNSIKQPYQSNESPVDADIVQTRHWVQNMLSDLMNSNDNKSPHSKNFRQFSRQLTALPVTTLPLSDWLSMQLLQR LTNYQPTKQYQTQIHNQAAIQGRLLIKEQLRHNSMQPHKFVCERSVLNQDMLGNRVIKSALTLLRPLLPQSNLLLHLQPW QQVSVLHQHEIRQLESIYFQAKRELAIQPLQAKQLQAALQLVDFAYWLLSQSNMEIGHSINAPKPFGSRSTPPRLCLLID MNQAFEQWAGQRIALSFQQLSDDYKPLFQAQRVWLNDAEGQACLSIRPDLLIYRQMRSNTKNKEKHDDTLPIKNLRANPS PEKQAGQYSHVIDIKWKPLAHASAISASDAYQLSSYAQAYQAEQVWLVYPVQDNQRRAVVLKQDTQDIYNSENAPYAQLW LIPFNVLTGTINIDLLPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57419; Mature: 57419
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINTHKHTQSSEMNIMTVFEHQRLIASNFLYDSDFQWLITQELSVFSIKRKQGQWQLKVG CCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCEEEECCHHHHEEECCCCCEEEEEC HYIGVIVLPSGMTLEILPKFIANTASNSIKQPYQSNESPVDADIVQTRHWVQNMLSDLMN CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC SNDNKSPHSKNFRQFSRQLTALPVTTLPLSDWLSMQLLQRLTNYQPTKQYQTQIHNQAAI CCCCCCCCHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH QGRLLIKEQLRHNSMQPHKFVCERSVLNQDMLGNRVIKSALTLLRPLLPQSNLLLHLQPW HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCH QQVSVLHQHEIRQLESIYFQAKRELAIQPLQAKQLQAALQLVDFAYWLLSQSNMEIGHSI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NAPKPFGSRSTPPRLCLLIDMNQAFEQWAGQRIALSFQQLSDDYKPLFQAQRVWLNDAEG CCCCCCCCCCCCCCEEEEEECHHHHHHHCCCEEEEEHHHHCCHHHHHHHHHHHHCCCCCC QACLSIRPDLLIYRQMRSNTKNKEKHDDTLPIKNLRANPSPEKQAGQYSHVIDIKWKPLA CEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCC HASAISASDAYQLSSYAQAYQAEQVWLVYPVQDNQRRAVVLKQDTQDIYNSENAPYAQLW CHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCHHHHCCCCCCEEEEE LIPFNVLTGTINIDLLPT EEEEEEEEEEEEEEEECC >Mature Secondary Structure MINTHKHTQSSEMNIMTVFEHQRLIASNFLYDSDFQWLITQELSVFSIKRKQGQWQLKVG CCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCEEEECCHHHHEEECCCCCEEEEEC HYIGVIVLPSGMTLEILPKFIANTASNSIKQPYQSNESPVDADIVQTRHWVQNMLSDLMN CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC SNDNKSPHSKNFRQFSRQLTALPVTTLPLSDWLSMQLLQRLTNYQPTKQYQTQIHNQAAI CCCCCCCCHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH QGRLLIKEQLRHNSMQPHKFVCERSVLNQDMLGNRVIKSALTLLRPLLPQSNLLLHLQPW HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCH QQVSVLHQHEIRQLESIYFQAKRELAIQPLQAKQLQAALQLVDFAYWLLSQSNMEIGHSI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NAPKPFGSRSTPPRLCLLIDMNQAFEQWAGQRIALSFQQLSDDYKPLFQAQRVWLNDAEG CCCCCCCCCCCCCCEEEEEECHHHHHHHCCCEEEEEHHHHCCHHHHHHHHHHHHCCCCCC QACLSIRPDLLIYRQMRSNTKNKEKHDDTLPIKNLRANPSPEKQAGQYSHVIDIKWKPLA CEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCC HASAISASDAYQLSSYAQAYQAEQVWLVYPVQDNQRRAVVLKQDTQDIYNSENAPYAQLW CHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCHHHHCCCCCCEEEEE LIPFNVLTGTINIDLLPT EEEEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA