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The map label for this gene is ydeD [C]

Identifier: 93005030

GI number: 93005030

Start: 235164

End: 236060

Strand: Direct

Name: ydeD [C]

Synonym: Pcryo_0199

Alternate gene names: 93005030

Gene position: 235164-236060 (Clockwise)

Preceding gene: 93005029

Following gene: 93005032

Centisome position: 7.69

GC content: 42.92

Gene sequence:

>897_bases
ATGTCTAACCGCGACCTCATTATTTTTATCACCTTATCTTTTATGTGGTCGCTGTCTTTCATTTTTTATCGTATTGGCGT
GCCTGAATTTGGCTCGTTAGCTTTTGCCAGCCTACGTGTGGTCTTGGCTGGACTGACGATGTTGGTGTTTGTAATACTAA
AAAAGAAAAACAGAGTAGGCATTCGTGAAAATTGGAAAGTATTAACGTTGGTTGGGCTTTTCTCCGCAGCAGTGCCCTTT
ATCCTGTTTGCATTTTCAGCGCGCTCGGTAAACGCTGGCGTATTGGCAGTACTTAATGCATCTGTGCCAATGATAAGCGG
CTTTATTGCCAGTGTATTTTTTAAAGACAGACTGTCAAAAAAGCAAATTCTCGGTTTGGTGATCGGTGTGATCGGCGTGA
TGATTCTAATGAGCGAGAACTTATTTGGCGGGCAGGGCGCTGGGTCAGGTTCTGGTTTATTACCGATGGGCTACGCATTA
TTGGCCTGTGTTGGCTACGCGCTTGGGGCAAATATCACTCGAAATTACTTGGAAAATGTTTCACCAGTAGCGATTACCGC
AGGCTCGCTTATCATTGCCAGTGTGATTATGTTGCCTGTGGCGGTTTATGAGTTTCCTTATGGTAAGAGCATCAGTCTCA
CCGCTTGGATTTCTGTCATTTGTATCGGTGTGTTTTCGACTGCCATCGCGCTGATTTTTATGAATCAGTTGATCAAAAGT
ATCGGGCCAGTACGAGCAACCAGTATTACTTTGGTGATTCCGATTTTTGCCATTATTTTAGGCTATCTGCTGCTTGGCGA
GGCATTGGATACACCCGCGATCATTGGTTCAATAGTGATATTATTTGGTACTTATTTGTCTTTGAATTTGTCTTTTAAAA
AGATGCTCAAATCATAA

Upstream 100 bases:

>100_bases
AATAAATCTGTGATAAGTACAGAAAATACAATACCTATTGAGCGCTGAACCAGTTATCATCGAGGTTTTTTTACTGTCTA
ATGCTCGATAGGATCATCTC

Downstream 100 bases:

>100_bases
AATATTTACTATTTTTAAATTTCATATAAAAAAACCTGTGTAAAATAAAGTTTATTTTGGCAAAATAGCCCTTCTAAGCA
CTCCCTATTGTCGCCATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSNRDLIIFITLSFMWSLSFIFYRIGVPEFGSLAFASLRVVLAGLTMLVFVILKKKNRVGIRENWKVLTLVGLFSAAVPF
ILFAFSARSVNAGVLAVLNASVPMISGFIASVFFKDRLSKKQILGLVIGVIGVMILMSENLFGGQGAGSGSGLLPMGYAL
LACVGYALGANITRNYLENVSPVAITAGSLIIASVIMLPVAVYEFPYGKSISLTAWISVICIGVFSTAIALIFMNQLIKS
IGPVRATSITLVIPIFAIILGYLLLGEALDTPAIIGSIVILFGTYLSLNLSFKKMLKS

Sequences:

>Translated_298_residues
MSNRDLIIFITLSFMWSLSFIFYRIGVPEFGSLAFASLRVVLAGLTMLVFVILKKKNRVGIRENWKVLTLVGLFSAAVPF
ILFAFSARSVNAGVLAVLNASVPMISGFIASVFFKDRLSKKQILGLVIGVIGVMILMSENLFGGQGAGSGSGLLPMGYAL
LACVGYALGANITRNYLENVSPVAITAGSLIIASVIMLPVAVYEFPYGKSISLTAWISVICIGVFSTAIALIFMNQLIKS
IGPVRATSITLVIPIFAIILGYLLLGEALDTPAIIGSIVILFGTYLSLNLSFKKMLKS
>Mature_297_residues
SNRDLIIFITLSFMWSLSFIFYRIGVPEFGSLAFASLRVVLAGLTMLVFVILKKKNRVGIRENWKVLTLVGLFSAAVPFI
LFAFSARSVNAGVLAVLNASVPMISGFIASVFFKDRLSKKQILGLVIGVIGVMILMSENLFGGQGAGSGSGLLPMGYALL
ACVGYALGANITRNYLENVSPVAITAGSLIIASVIMLPVAVYEFPYGKSISLTAWISVICIGVFSTAIALIFMNQLIKSI
GPVRATSITLVIPIFAIILGYLLLGEALDTPAIIGSIVILFGTYLSLNLSFKKMLKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31865; Mature: 31734

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRDLIIFITLSFMWSLSFIFYRIGVPEFGSLAFASLRVVLAGLTMLVFVILKKKNRVG
CCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IRENWKVLTLVGLFSAAVPFILFAFSARSVNAGVLAVLNASVPMISGFIASVFFKDRLSK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHHHHHHHHHH
KQILGLVIGVIGVMILMSENLFGGQGAGSGSGLLPMGYALLACVGYALGANITRNYLENV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCC
SPVAITAGSLIIASVIMLPVAVYEFPYGKSISLTAWISVICIGVFSTAIALIFMNQLIKS
CCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGPVRATSITLVIPIFAIILGYLLLGEALDTPAIIGSIVILFGTYLSLNLSFKKMLKS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure 
SNRDLIIFITLSFMWSLSFIFYRIGVPEFGSLAFASLRVVLAGLTMLVFVILKKKNRVG
CCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IRENWKVLTLVGLFSAAVPFILFAFSARSVNAGVLAVLNASVPMISGFIASVFFKDRLSK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHHHHHHHHHH
KQILGLVIGVIGVMILMSENLFGGQGAGSGSGLLPMGYALLACVGYALGANITRNYLENV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCC
SPVAITAGSLIIASVIMLPVAVYEFPYGKSISLTAWISVICIGVFSTAIALIFMNQLIKS
CCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGPVRATSITLVIPIFAIILGYLLLGEALDTPAIIGSIVILFGTYLSLNLSFKKMLKS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]