Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
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Accession | NC_007963 |
Length | 3,696,649 |
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The map label for this gene is galU [H]
Identifier: 92113982
GI number: 92113982
Start: 2112896
End: 2113783
Strand: Direct
Name: galU [H]
Synonym: Csal_1859
Alternate gene names: 92113982
Gene position: 2112896-2113783 (Clockwise)
Preceding gene: 92113979
Following gene: 92113983
Centisome position: 57.16
GC content: 64.64
Gene sequence:
>888_bases ATGATCAAGAAGGCCGTACTCCCCGTCGCTGGTCTCGGTACGCGTTGCCTGCCGGCCTCCAAGGCCATTCCCAAGGAAAT GATCACCATCGTCGACAAGCCGGTCATCCAGTATGTCGTCGAGGAGGCCGTCGCGGCCGGCATCAAGGAGATCGTCCTGG TGACGCACTCCAGCAAGAGTGCCATCGAAAACCACTTCGACAAGAACTTCGAGCTCGAATCCATGCTCGAGGCCAAGGGA AAGGACGAGCTGCTTGCGGAAGTCCGCAACATCGTGCCCGACGATGTCAGCATCATCGCCGTGCGCCAGCCGGTCGCCCT GGGGCTGGGCCACGCGGTTCTCTGCGCGCAGTCGGTGATCGGCGACGACCCGTTCGCGGTGCTGTTGCCCGATGTTCTGG TCGATGCGGAGGGACTGCCGGAAAACGACCTGGCCGGCATGATCCACGCCTTCGACAAGAGCGGGCAGGCCCAGATCATG GTCGAGAACGTGCCGCACGAACTGACCTACAAGTACGGCATCGTCGCCCTGGATGGCGAGACGCCCGCACCAGGCGTCAG CGCCCCCCTGAGCGGCATGGTCGAGAAGCCCAAGGTCGAGGAGGCCCCCTCCAGCCTGGCGGTGATCGGTCGTTACCTGC TGCCGGCGGCGATCTTCCCGCTACTGGCCGAAACGACGCCCGGCGCGGGCAACGAGATCCAGTTGACCGACGCGCTCGAA ACGCTGCGCCAGCAGCAGGGGGCCGAGGCCTACCGCATGCGTGGCAAGACCTATGACTGCGGTCACCAGTTGGGCTATCT CGAAGCCACCTTGGCGTTGGCCAAGCGCCATCCCCAGCATGGCGAAGGATTCCGCGCCTTGCTGAGCCGCTACGCCGACG AGGGCTGA
Upstream 100 bases:
>100_bases TGAACATCATCAAAGGAATGCCGAATCGGTGACGCCGTGGCCCTTTTGGCTATGGCATACTGCCGTCATTCGTCCCTGGA ACGCTAAGGAAGGAACCTGC
Downstream 100 bases:
>100_bases GCCATGCGCGTCAACGTGTATGGAAGCGAGCTTTCGGCCGCGGTGGCAGCGGCAGCGCTGTCTTCGGTAGGGCACCAGGT CGTCTGGTGCCCCCATCCCG
Product: UDP-glucose pyrophosphorylase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MIKKAVLPVAGLGTRCLPASKAIPKEMITIVDKPVIQYVVEEAVAAGIKEIVLVTHSSKSAIENHFDKNFELESMLEAKG KDELLAEVRNIVPDDVSIIAVRQPVALGLGHAVLCAQSVIGDDPFAVLLPDVLVDAEGLPENDLAGMIHAFDKSGQAQIM VENVPHELTYKYGIVALDGETPAPGVSAPLSGMVEKPKVEEAPSSLAVIGRYLLPAAIFPLLAETTPGAGNEIQLTDALE TLRQQQGAEAYRMRGKTYDCGHQLGYLEATLALAKRHPQHGEGFRALLSRYADEG
Sequences:
>Translated_295_residues MIKKAVLPVAGLGTRCLPASKAIPKEMITIVDKPVIQYVVEEAVAAGIKEIVLVTHSSKSAIENHFDKNFELESMLEAKG KDELLAEVRNIVPDDVSIIAVRQPVALGLGHAVLCAQSVIGDDPFAVLLPDVLVDAEGLPENDLAGMIHAFDKSGQAQIM VENVPHELTYKYGIVALDGETPAPGVSAPLSGMVEKPKVEEAPSSLAVIGRYLLPAAIFPLLAETTPGAGNEIQLTDALE TLRQQQGAEAYRMRGKTYDCGHQLGYLEATLALAKRHPQHGEGFRALLSRYADEG >Mature_295_residues MIKKAVLPVAGLGTRCLPASKAIPKEMITIVDKPVIQYVVEEAVAAGIKEIVLVTHSSKSAIENHFDKNFELESMLEAKG KDELLAEVRNIVPDDVSIIAVRQPVALGLGHAVLCAQSVIGDDPFAVLLPDVLVDAEGLPENDLAGMIHAFDKSGQAQIM VENVPHELTYKYGIVALDGETPAPGVSAPLSGMVEKPKVEEAPSSLAVIGRYLLPAAIFPLLAETTPGAGNEIQLTDALE TLRQQQGAEAYRMRGKTYDCGHQLGYLEATLALAKRHPQHGEGFRALLSRYADEG
Specific function: May play a role in stationary phase survival [H]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=289, Percent_Identity=58.1314878892734, Blast_Score=333, Evalue=7e-93, Organism=Escherichia coli, GI1788355, Length=295, Percent_Identity=47.4576271186441, Blast_Score=268, Evalue=2e-73,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 31559; Mature: 31559
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKAVLPVAGLGTRCLPASKAIPKEMITIVDKPVIQYVVEEAVAAGIKEIVLVTHSSKS CCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCHH AIENHFDKNFELESMLEAKGKDELLAEVRNIVPDDVSIIAVRQPVALGLGHAVLCAQSVI HHHHHCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHH GDDPFAVLLPDVLVDAEGLPENDLAGMIHAFDKSGQAQIMVENVPHELTYKYGIVALDGE CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHEEEEEEEEECCC TPAPGVSAPLSGMVEKPKVEEAPSSLAVIGRYLLPAAIFPLLAETTPGAGNEIQLTDALE CCCCCCCCCHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHH TLRQQQGAEAYRMRGKTYDCGHQLGYLEATLALAKRHPQHGEGFRALLSRYADEG HHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MIKKAVLPVAGLGTRCLPASKAIPKEMITIVDKPVIQYVVEEAVAAGIKEIVLVTHSSKS CCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCHH AIENHFDKNFELESMLEAKGKDELLAEVRNIVPDDVSIIAVRQPVALGLGHAVLCAQSVI HHHHHCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHH GDDPFAVLLPDVLVDAEGLPENDLAGMIHAFDKSGQAQIMVENVPHELTYKYGIVALDGE CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHEEEEEEEEECCC TPAPGVSAPLSGMVEKPKVEEAPSSLAVIGRYLLPAAIFPLLAETTPGAGNEIQLTDALE CCCCCCCCCHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHH TLRQQQGAEAYRMRGKTYDCGHQLGYLEATLALAKRHPQHGEGFRALLSRYADEG HHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]