The gene/protein map for NC_010571 is currently unavailable.
Definition Chromohalobacter salexigens DSM 3043 chromosome, complete genome.
Accession NC_007963
Length 3,696,649

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The map label for this gene is yciK [H]

Identifier: 92113979

GI number: 92113979

Start: 2110394

End: 2111179

Strand: Direct

Name: yciK [H]

Synonym: Csal_1856

Alternate gene names: 92113979

Gene position: 2110394-2111179 (Clockwise)

Preceding gene: 92113978

Following gene: 92113982

Centisome position: 57.09

GC content: 66.92

Gene sequence:

>786_bases
ATGGAGTGCCATATCGACTATCAGCCGGCGGCCGACCTGCTCGAGGGGCGGGTGATCCTGGTGACCGGCGCCGGTGACGG
TATCGGGCGTGCCGCGGCGCGCTGCTTTGCCGCACATGGCGCCACGCTGATACTGGTGGGGCGCACCTTGGCCAAGCTCG
AGGCGGTGTACGACGAAATCGAAGTGGCCGGCGGCCCGCAGCCCGCGATTTTTCCGCTGAATTTCGAAGGTGCCACCAGC
AAGGAGTACCACGAGCTGGCCGGCACTCTGTCCCGGGAATTCGGCCGTCTGGACGGACTGCTGCATAACGCCGGCCTGCT
CGGCGACATGGCCCCCTTCGCCGATTACGATCTCGAACTCTGGGAGCGCGTGATGCACGTCAACGTCACCGGCCCTCTCT
GGATGACGCAGGCCTTGCTGCCGCTGCTGCAGGCATCGCGCGATGCCTCGGTGATCCTGACGTCATCGAGCGTCGGACGG
AAGGCGCGGGCGAAGTGGGGCGCCTATGCCGTCTCCAAGTTCGCCACGGAAGGCTTCATGCAGCTCCTGGCCGACGAGCT
CGCGGGCACTTCAAGCGTCCGCGTCAACACGCTCAATCCGGGGGCTACGCGTACCGCCATGCGGCGGCGCGCCTATCCCG
AGGAAGACCCCACGACATTGCGCACGCCCGACGCGATCATGCCCACCTACCTGTGGCTGATGGGACCGGACAGCCGTGAA
CGCACGGGTGAGGCTTTCGATGCACAGCCCCCGCGAACCTCACGCCCGGGGCACGTCGCCGGGTAA

Upstream 100 bases:

>100_bases
GCGGCCAGCATGGCCGAGGACTTCCTCAACCAGTCCGGCAACTGAACGCTGCCGGCCATACCGAGCTGATCCCCCGACGG
ATACGAGGCGGAGGTGAACT

Downstream 100 bases:

>100_bases
ACCGGGCACTGGCACCGAGAAAGAGCTGACCGTGTCCGCGGATGGCACTCCGCATCAGGCGCCCAGTGCTCGTGTCAGGC
TTTCCGGGGTCTCGAACCAG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MECHIDYQPAADLLEGRVILVTGAGDGIGRAAARCFAAHGATLILVGRTLAKLEAVYDEIEVAGGPQPAIFPLNFEGATS
KEYHELAGTLSREFGRLDGLLHNAGLLGDMAPFADYDLELWERVMHVNVTGPLWMTQALLPLLQASRDASVILTSSSVGR
KARAKWGAYAVSKFATEGFMQLLADELAGTSSVRVNTLNPGATRTAMRRRAYPEEDPTTLRTPDAIMPTYLWLMGPDSRE
RTGEAFDAQPPRTSRPGHVAG

Sequences:

>Translated_261_residues
MECHIDYQPAADLLEGRVILVTGAGDGIGRAAARCFAAHGATLILVGRTLAKLEAVYDEIEVAGGPQPAIFPLNFEGATS
KEYHELAGTLSREFGRLDGLLHNAGLLGDMAPFADYDLELWERVMHVNVTGPLWMTQALLPLLQASRDASVILTSSSVGR
KARAKWGAYAVSKFATEGFMQLLADELAGTSSVRVNTLNPGATRTAMRRRAYPEEDPTTLRTPDAIMPTYLWLMGPDSRE
RTGEAFDAQPPRTSRPGHVAG
>Mature_261_residues
MECHIDYQPAADLLEGRVILVTGAGDGIGRAAARCFAAHGATLILVGRTLAKLEAVYDEIEVAGGPQPAIFPLNFEGATS
KEYHELAGTLSREFGRLDGLLHNAGLLGDMAPFADYDLELWERVMHVNVTGPLWMTQALLPLLQASRDASVILTSSSVGR
KARAKWGAYAVSKFATEGFMQLLADELAGTSSVRVNTLNPGATRTAMRRRAYPEEDPTTLRTPDAIMPTYLWLMGPDSRE
RTGEAFDAQPPRTSRPGHVAG

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4504505, Length=239, Percent_Identity=30.5439330543933, Blast_Score=92, Evalue=3e-19,
Organism=Homo sapiens, GI20149619, Length=239, Percent_Identity=28.4518828451883, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI32483357, Length=243, Percent_Identity=28.8065843621399, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI157739938, Length=206, Percent_Identity=28.1553398058252, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI142976729, Length=207, Percent_Identity=28.0193236714976, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI4557649, Length=198, Percent_Identity=30.8080808080808, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI32455239, Length=244, Percent_Identity=27.0491803278689, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI5031765, Length=244, Percent_Identity=27.0491803278689, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI33667109, Length=200, Percent_Identity=31, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI5031737, Length=211, Percent_Identity=29.8578199052133, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI7705925, Length=211, Percent_Identity=28.436018957346, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI7706318, Length=211, Percent_Identity=26.5402843601896, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI4503817, Length=178, Percent_Identity=27.5280898876405, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI19923817, Length=266, Percent_Identity=23.3082706766917, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI40807363, Length=195, Percent_Identity=28.2051282051282, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI210032110, Length=230, Percent_Identity=25.2173913043478, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI126723191, Length=195, Percent_Identity=28.7179487179487, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI25282469, Length=236, Percent_Identity=26.6949152542373, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI31542939, Length=211, Percent_Identity=29.8578199052133, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1787526, Length=253, Percent_Identity=55.3359683794466, Blast_Score=263, Evalue=7e-72,
Organism=Escherichia coli, GI87082100, Length=219, Percent_Identity=34.2465753424658, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1787335, Length=196, Percent_Identity=30.6122448979592, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787820, Length=184, Percent_Identity=30.9782608695652, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1786812, Length=210, Percent_Identity=28.0952380952381, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789378, Length=243, Percent_Identity=28.3950617283951, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787905, Length=240, Percent_Identity=27.0833333333333, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1790717, Length=218, Percent_Identity=28.4403669724771, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17562906, Length=200, Percent_Identity=33, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17562908, Length=203, Percent_Identity=34.4827586206897, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI71994604, Length=198, Percent_Identity=33.3333333333333, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17560150, Length=193, Percent_Identity=30.0518134715026, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17562990, Length=193, Percent_Identity=31.0880829015544, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17531453, Length=202, Percent_Identity=30.6930693069307, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17560220, Length=195, Percent_Identity=30.2564102564103, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17568967, Length=249, Percent_Identity=28.9156626506024, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17551412, Length=203, Percent_Identity=32.512315270936, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=197, Percent_Identity=25.8883248730964, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI193204405, Length=197, Percent_Identity=30.4568527918782, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71994600, Length=200, Percent_Identity=31, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17538480, Length=197, Percent_Identity=28.9340101522843, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI72000259, Length=191, Percent_Identity=30.3664921465969, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17560676, Length=215, Percent_Identity=30.2325581395349, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17544670, Length=204, Percent_Identity=29.4117647058824, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17559104, Length=220, Percent_Identity=26.3636363636364, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71997402, Length=201, Percent_Identity=28.3582089552239, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17561402, Length=244, Percent_Identity=24.5901639344262, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=202, Percent_Identity=26.2376237623762, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17560332, Length=204, Percent_Identity=26.4705882352941, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562910, Length=198, Percent_Identity=29.7979797979798, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=201, Percent_Identity=26.3681592039801, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17567345, Length=200, Percent_Identity=26.5, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=212, Percent_Identity=31.6037735849057, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17564282, Length=184, Percent_Identity=27.1739130434783, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17570069, Length=176, Percent_Identity=26.7045454545455, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115534660, Length=206, Percent_Identity=30.0970873786408, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17557780, Length=196, Percent_Identity=23.469387755102, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI25152911, Length=210, Percent_Identity=27.6190476190476, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=228, Percent_Identity=29.8245614035088, Blast_Score=86, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6323882, Length=201, Percent_Identity=31.3432835820896, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6322227, Length=199, Percent_Identity=27.1356783919598, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6322226, Length=205, Percent_Identity=24.390243902439, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI23397609, Length=197, Percent_Identity=37.0558375634518, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI28571526, Length=200, Percent_Identity=35, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21357041, Length=194, Percent_Identity=35.5670103092784, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24644339, Length=197, Percent_Identity=34.5177664974619, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI21355319, Length=257, Percent_Identity=27.6264591439689, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI45553409, Length=218, Percent_Identity=30.2752293577982, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24647948, Length=218, Percent_Identity=30.2752293577982, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24647946, Length=218, Percent_Identity=30.2752293577982, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI21358495, Length=234, Percent_Identity=29.9145299145299, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24643142, Length=196, Percent_Identity=33.1632653061224, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI18859837, Length=228, Percent_Identity=30.2631578947368, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281364892, Length=229, Percent_Identity=26.6375545851528, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24640492, Length=205, Percent_Identity=26.3414634146341, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24639444, Length=249, Percent_Identity=27.710843373494, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28573296, Length=206, Percent_Identity=31.5533980582524, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28193; Mature: 28193

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MECHIDYQPAADLLEGRVILVTGAGDGIGRAAARCFAAHGATLILVGRTLAKLEAVYDEI
CCCCCCCCCHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHH
EVAGGPQPAIFPLNFEGATSKEYHELAGTLSREFGRLDGLLHNAGLLGDMAPFADYDLEL
HHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
WERVMHVNVTGPLWMTQALLPLLQASRDASVILTSSSVGRKARAKWGAYAVSKFATEGFM
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
QLLADELAGTSSVRVNTLNPGATRTAMRRRAYPEEDPTTLRTPDAIMPTYLWLMGPDSRE
HHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEEECCCCHH
RTGEAFDAQPPRTSRPGHVAG
HCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MECHIDYQPAADLLEGRVILVTGAGDGIGRAAARCFAAHGATLILVGRTLAKLEAVYDEI
CCCCCCCCCHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHH
EVAGGPQPAIFPLNFEGATSKEYHELAGTLSREFGRLDGLLHNAGLLGDMAPFADYDLEL
HHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
WERVMHVNVTGPLWMTQALLPLLQASRDASVILTSSSVGRKARAKWGAYAVSKFATEGFM
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
QLLADELAGTSSVRVNTLNPGATRTAMRRRAYPEEDPTTLRTPDAIMPTYLWLMGPDSRE
HHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEEECCCCHH
RTGEAFDAQPPRTSRPGHVAG
HCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on the CH-OH group of donors; With NAD or NADP as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1885549 [H]