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The map label for this gene is yebC [C]

Identifier: 92113968

GI number: 92113968

Start: 2101950

End: 2102699

Strand: Direct

Name: yebC [C]

Synonym: Csal_1845

Alternate gene names: 92113968

Gene position: 2101950-2102699 (Clockwise)

Preceding gene: 92113967

Following gene: 92113969

Centisome position: 56.86

GC content: 64.13

Gene sequence:

>750_bases
ATGGCAGGCCATAGTAAATGGGCGAACATCAAGCACCGCAAGGCCGCCCAAGATGCCAAACGCGGCAAGATCTTCAGCAA
GTTGATCCGTGAACTGACCGTTGCTTCCCGCCAGGGCGGCGGTGAAGTGGCGGACAACCCCCGCCTGCGTGCTGCCATCG
ACAAGGCGCTGGCCAACAACATGACCAAGGACACCATCCAGCGCGCCATCGAGCGCGGCGCCGGCAATACCGACGGCGAC
GAGATGGAGGAGACCGTCTACGAGGGTTACGGCCCCGAGGGGGTCGCCGTGCTGGTCGAATGCATGACCGACAATCGCAA
TCGCACGGTGTCCGACGTGCGGCATGCCTTCAGCAAGAACGGCGGCAATCTCGGCACCTCGGGGTCGGTGGCGTTCATGT
TCCATAAGCAGGGGCGACTGACCTTGCCCGAGGGTGTCAGCGAGGAAACGGCGATGGAGGCCACGCTGGCCGCCGAGCCC
GAGGACATCGTCACGCAAGCCGACGGCACGCTGGAGGTCGTGACCTCGCCGGAGCGCTTCGGCGCGGTGAAGGACGCGCT
GCTCGAGGCGGATATCGAGCCCGTCGCCAGCGACGTGGGCCTCTACCCCGACAACTACACGTCGATCGACGATGTCGAGA
CGGCGCGCAAGGTCCTCAAGCTGTTCGACATGCTCGAGGATCTCGACGACGTGCAGAACGTCTACTCCAACGCCGATTTC
TCGGACGCCGTCATGGCGGAACTCGAGTGA

Upstream 100 bases:

>100_bases
AGGCCGCACGTCCTGCGTCCTTCTCGTTGTCCCGGCGCCCCTCGGGCGCCGGGTGTCCTGCAAACCGCGAACGCCTGTAT
TTCCAAGGAGTGACGTCGAC

Downstream 100 bases:

>100_bases
CGGGCGAGGGCTCGGCGACCATCCTGCTGGGCATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTCGTCGATGTCGCC
ACGCCCACTCCTCGCTACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MAGHSKWANIKHRKAAQDAKRGKIFSKLIRELTVASRQGGGEVADNPRLRAAIDKALANNMTKDTIQRAIERGAGNTDGD
EMEETVYEGYGPEGVAVLVECMTDNRNRTVSDVRHAFSKNGGNLGTSGSVAFMFHKQGRLTLPEGVSEETAMEATLAAEP
EDIVTQADGTLEVVTSPERFGAVKDALLEADIEPVASDVGLYPDNYTSIDDVETARKVLKLFDMLEDLDDVQNVYSNADF
SDAVMAELE

Sequences:

>Translated_249_residues
MAGHSKWANIKHRKAAQDAKRGKIFSKLIRELTVASRQGGGEVADNPRLRAAIDKALANNMTKDTIQRAIERGAGNTDGD
EMEETVYEGYGPEGVAVLVECMTDNRNRTVSDVRHAFSKNGGNLGTSGSVAFMFHKQGRLTLPEGVSEETAMEATLAAEP
EDIVTQADGTLEVVTSPERFGAVKDALLEADIEPVASDVGLYPDNYTSIDDVETARKVLKLFDMLEDLDDVQNVYSNADF
SDAVMAELE
>Mature_248_residues
AGHSKWANIKHRKAAQDAKRGKIFSKLIRELTVASRQGGGEVADNPRLRAAIDKALANNMTKDTIQRAIERGAGNTDGDE
MEETVYEGYGPEGVAVLVECMTDNRNRTVSDVRHAFSKNGGNLGTSGSVAFMFHKQGRLTLPEGVSEETAMEATLAAEPE
DIVTQADGTLEVVTSPERFGAVKDALLEADIEPVASDVGLYPDNYTSIDDVETARKVLKLFDMLEDLDDVQNVYSNADFS
DAVMAELE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=255, Percent_Identity=25.8823529411765, Blast_Score=93, Evalue=3e-19,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=57.6612903225806, Blast_Score=292, Evalue=2e-80,
Organism=Escherichia coli, GI1788294, Length=243, Percent_Identity=34.156378600823, Blast_Score=120, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=25, Blast_Score=67, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=35.9848484848485, Blast_Score=132, Evalue=4e-32,
Organism=Drosophila melanogaster, GI24583305, Length=248, Percent_Identity=26.6129032258064, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1845_CHRSD (Q1QWG1)

Other databases:

- EMBL:   CP000285
- RefSeq:   YP_573896.1
- ProteinModelPortal:   Q1QWG1
- SMR:   Q1QWG1
- STRING:   Q1QWG1
- GeneID:   4028071
- GenomeReviews:   CP000285_GR
- KEGG:   csa:Csal_1845
- NMPDR:   fig|290398.4.peg.1648
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   CSAL290398:CSAL_1845-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27013; Mature: 26882

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKHRKAAQDAKRGKIFSKLIRELTVASRQGGGEVADNPRLRAAIDKALANN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC
MTKDTIQRAIERGAGNTDGDEMEETVYEGYGPEGVAVLVECMTDNRNRTVSDVRHAFSKN
CCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCC
GGNLGTSGSVAFMFHKQGRLTLPEGVSEETAMEATLAAEPEDIVTQADGTLEVVTSPERF
CCCCCCCCCEEEEEECCCCEECCCCCCHHHHHHHHHHCCCHHHHHCCCCCEEEEECHHHH
GAVKDALLEADIEPVASDVGLYPDNYTSIDDVETARKVLKLFDMLEDLDDVQNVYSNADF
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SDAVMAELE
CHHHHHHCC
>Mature Secondary Structure 
AGHSKWANIKHRKAAQDAKRGKIFSKLIRELTVASRQGGGEVADNPRLRAAIDKALANN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC
MTKDTIQRAIERGAGNTDGDEMEETVYEGYGPEGVAVLVECMTDNRNRTVSDVRHAFSKN
CCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCC
GGNLGTSGSVAFMFHKQGRLTLPEGVSEETAMEATLAAEPEDIVTQADGTLEVVTSPERF
CCCCCCCCCEEEEEECCCCEECCCCCCHHHHHHHHHHCCCHHHHHCCCCCEEEEECHHHH
GAVKDALLEADIEPVASDVGLYPDNYTSIDDVETARKVLKLFDMLEDLDDVQNVYSNADF
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SDAVMAELE
CHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA