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The map label for this gene is yaaJ [C]

Identifier: 92113937

GI number: 92113937

Start: 2062269

End: 2063654

Strand: Direct

Name: yaaJ [C]

Synonym: Csal_1814

Alternate gene names: 92113937

Gene position: 2062269-2063654 (Clockwise)

Preceding gene: 92113933

Following gene: 92113938

Centisome position: 55.79

GC content: 61.69

Gene sequence:

>1386_bases
GTGGAAACACTCAACGCAATATTCAGCGCCATCAACGATGTCGTATGGGGCCCCTTGATGCTTGTTCTTTTGCTCGGCGT
GGGGGTCTATCTCCAGCTGGGTCTCAAGCTGTTGCCCATTCGCAAGCTGGGCGCGGGCTTCCGGCTGCTCTGGAAAGGGC
GCCAGGCCGAAAAAGGGGATGAAAATGAAGGGGAAATCTCTCCCTTCAATGCGCTGATGACGTCGCTATCGGCCACCGTC
GGTACCGGCAACATCGCCGGGGTGGCGACGGCCATCTTCCTGGGGGGGCCGGGCGCGGTGTTCTGGATGTGGATCACCGC
GCTGGTCGGCATGGCGACCAAGTTTGCCGAGGCGGTGCTGGCCGTCCGCTATCGTGAAGTCGATGCGGCCGGCGATCACG
TTGGCGGGCCCATGTATTACATTCGCAATGGGCTGGGCAAGAAGTGGGCTTGGCTAGGGGCCCTGTTCGCCTTTTTCGGT
GCGGTGGCCGCCTTCGGTATCGGCAATACCGTGCAGTCCAATTCGGTCGCCGATGGGCTCAGCGAGTCACTGGGCATGCC
GCACTGGCTGACCGGTGTGATCATCATGCTGCTGGCCGGTGCCGTGATCCTCGGCGGGATCAAGCGCATTGCCAAGGTGG
CGGGCAAGCTGGTGCCCTTCATGGCGATCGCCTACATCGTCTGTGGTCTGCTGGTGCTGTTCATCAATATCGATCAGGTC
GGGGCAGCGCTGGGGCTGATCTTCGGTCATGCCTTCACGCCGGTATCCGCCGCCGGCGGTTTCGCCGGGGCTGCCGTGGC
CAAGGCCATTCAGTATGGCGTGGCGAGGGGCGTGTTCTCCAATGAAGCGGGGCTGGGGAGTGCGCCCATCGCCCATGCCG
CGGCACAGACCAAGAACCCGGTGCGTCAGGGGCTGGTGGCGATGCTGGGAACCTTCATCGATACCATCATCGTGTGCTCG
GTCACCGCATTGGCGATCTTGACCAGCGCCGAGTGGACATCGGGCGAGACCGGCGCTGCATTGACCGCCATGGCCTTCAA
TGGCGCGCTTCCGGGAATCGGCCAGTATGTCGTGTCCTTTGCGCTGGCGGTCTTTGCCTTCACGACCATTCTCGGCTGGG
CCTTCTATGGCGAAAAGTGCTTCGAATACCTGTTCGGTGTCGCATCGATCAAGGTCTATCGGGTGGTCTATATCCTGGCG
ATCCTCGTCGGGGCCGTCGCGCCGCTGGACTTCGTATGGCTGATGGCCAGTGTCTTCAATGCCATGATGGCGATCCCCAA
CCTGATTGCATTGGCTCTTCTGTCGCCGGTGGTCTTCAAGCTCACGCGTGATCACTTCGAGGGCAAGACCGTCCTGCCGG
GCGAAGATCTCAACGACAAGCACTGA

Upstream 100 bases:

>100_bases
TCCGCTAAAGTCGACAGGGTTTTGGCGTTTATCTTCTTGATGTTACGCCGACGGCAGCGCATCTCGTGCTGATAACAACA
AATGTCTGGGAGGACATCTC

Downstream 100 bases:

>100_bases
AACCAAGCCGGGCGCGGTCCAGCCGCTCCCGGCATGCACCTTTGCGAGGAAGCGACCATGGACGACGATCTGCACCAGAC
ACCGCTGCATGACTTGCATC

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
METLNAIFSAINDVVWGPLMLVLLLGVGVYLQLGLKLLPIRKLGAGFRLLWKGRQAEKGDENEGEISPFNALMTSLSATV
GTGNIAGVATAIFLGGPGAVFWMWITALVGMATKFAEAVLAVRYREVDAAGDHVGGPMYYIRNGLGKKWAWLGALFAFFG
AVAAFGIGNTVQSNSVADGLSESLGMPHWLTGVIIMLLAGAVILGGIKRIAKVAGKLVPFMAIAYIVCGLLVLFINIDQV
GAALGLIFGHAFTPVSAAGGFAGAAVAKAIQYGVARGVFSNEAGLGSAPIAHAAAQTKNPVRQGLVAMLGTFIDTIIVCS
VTALAILTSAEWTSGETGAALTAMAFNGALPGIGQYVVSFALAVFAFTTILGWAFYGEKCFEYLFGVASIKVYRVVYILA
ILVGAVAPLDFVWLMASVFNAMMAIPNLIALALLSPVVFKLTRDHFEGKTVLPGEDLNDKH

Sequences:

>Translated_461_residues
METLNAIFSAINDVVWGPLMLVLLLGVGVYLQLGLKLLPIRKLGAGFRLLWKGRQAEKGDENEGEISPFNALMTSLSATV
GTGNIAGVATAIFLGGPGAVFWMWITALVGMATKFAEAVLAVRYREVDAAGDHVGGPMYYIRNGLGKKWAWLGALFAFFG
AVAAFGIGNTVQSNSVADGLSESLGMPHWLTGVIIMLLAGAVILGGIKRIAKVAGKLVPFMAIAYIVCGLLVLFINIDQV
GAALGLIFGHAFTPVSAAGGFAGAAVAKAIQYGVARGVFSNEAGLGSAPIAHAAAQTKNPVRQGLVAMLGTFIDTIIVCS
VTALAILTSAEWTSGETGAALTAMAFNGALPGIGQYVVSFALAVFAFTTILGWAFYGEKCFEYLFGVASIKVYRVVYILA
ILVGAVAPLDFVWLMASVFNAMMAIPNLIALALLSPVVFKLTRDHFEGKTVLPGEDLNDKH
>Mature_461_residues
METLNAIFSAINDVVWGPLMLVLLLGVGVYLQLGLKLLPIRKLGAGFRLLWKGRQAEKGDENEGEISPFNALMTSLSATV
GTGNIAGVATAIFLGGPGAVFWMWITALVGMATKFAEAVLAVRYREVDAAGDHVGGPMYYIRNGLGKKWAWLGALFAFFG
AVAAFGIGNTVQSNSVADGLSESLGMPHWLTGVIIMLLAGAVILGGIKRIAKVAGKLVPFMAIAYIVCGLLVLFINIDQV
GAALGLIFGHAFTPVSAAGGFAGAAVAKAIQYGVARGVFSNEAGLGSAPIAHAAAQTKNPVRQGLVAMLGTFIDTIIVCS
VTALAILTSAEWTSGETGAALTAMAFNGALPGIGQYVVSFALAVFAFTTILGWAFYGEKCFEYLFGVASIKVYRVVYILA
ILVGAVAPLDFVWLMASVFNAMMAIPNLIALALLSPVVFKLTRDHFEGKTVLPGEDLNDKH

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=455, Percent_Identity=37.3626373626374, Blast_Score=249, Evalue=2e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 48256; Mature: 48256

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]