Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
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Accession | NC_007963 |
Length | 3,696,649 |
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The map label for this gene is 92113873
Identifier: 92113873
GI number: 92113873
Start: 1994979
End: 1995947
Strand: Direct
Name: 92113873
Synonym: Csal_1750
Alternate gene names: NA
Gene position: 1994979-1995947 (Clockwise)
Preceding gene: 92113872
Following gene: 92113880
Centisome position: 53.97
GC content: 66.36
Gene sequence:
>969_bases ATGGCCAGATCGCTGAAAGAGCAGCTCTACCGGGTGTTGCGTGACGCCATCGACGCCGGGCGTCTCGAGCCCGGACTGGT CCTGCTGGAAGGGCACATTGCCGAGCATTTTTGCATGAGTCGTTCACCGGTGAGGCAGACGCTGTCGCGGTTGCACGAAG AGGGAGCGATTTGCCGTTTCGAGGGGCGCGGTTATCAGGTCGGGCCGCGCCCGGGCGAGATCGTGAGGCGTTCGCTGGGG ACGGGAGATTTCAGCGCCTCGCGCATCGAGCGCACGGATACCTGGCGAACGTTCGCGGAGGGCGTGGAACGCGATGTGGT GCTGTGCTCGATGAAAGGGCGCTTCGAGCTCAACGAGCTGCAACTGGCGCGGGCGCTGTCGGTCAGTCGCTCCCTGACGC ACCGCATCCTGCTCTATCTGCAGAGCATCGGCGTGGTGGAAAAGGTCAAGTACAGCAGCTGGACGGTCGTTCCCCTGGAC GATGCACGGCTTCGCGACCTGTATCAGGCGCGTCGCCAGCTGGAGCCGTACATGATGACGCGCGCTGCCGAGGCGCTCGA GGACGCCGAAATACGCCGCTATCTCCAGCGTCTGGACGATGCCGCGCGCGCCTACCCCCAGGTGCCCAGCGCGCGCCTCG ACGCCCTGGAGAACGATCTGCACCATGAAGCGCTGGCGCGAGGCAACAACGCGGAGATCATGACCATGCTGCAGCGCACA CGGCCGATCCTGCTGATCAGCAAGCACCTGTTGGGGTCGTCGATCGCGCTGCCCAGCGTGGCACCGTTCTTCGACGAACA CCGGCATGTGTTCGACAAGGCGCTGGCGCGCGACGGCGGGGCGGCGGGGCGCGCTCTCGACGAGCACCTGGCGCGCTCGG AAGCGCAGGTCCAGGCACGCCTGAGCGACTTCCGCGAGGCCGGCGCGATCGACGTGCCGAACTATCTGCGCGAGGTCGCG CCTTCCTGA
Upstream 100 bases:
>100_bases TGCCGTGGATGGTCGGCGCCATCACCTGAGTGCGGTGTCCCGGTGCCGAAGCCGTACGAGAAGACGCAGGGAAGACAGTC CAGGAGGAAAAGACAGCCCC
Downstream 100 bases:
>100_bases GTGCGTGACAAAACAAACGCCGTGAGGGCTGGGTGTCGATCAGCTCGGGCGCTCGCCGTTGCGCCGGCGCAGCTCGCGGA TCAGCGCGCTGTGGTCCAGG
Product: GntR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator GntR Family; Regulatory Protein GntR; GntR Family Regulatory Protein; Transcriptional Regulator; Transcriptional Regulator Protein
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MARSLKEQLYRVLRDAIDAGRLEPGLVLLEGHIAEHFCMSRSPVRQTLSRLHEEGAICRFEGRGYQVGPRPGEIVRRSLG TGDFSASRIERTDTWRTFAEGVERDVVLCSMKGRFELNELQLARALSVSRSLTHRILLYLQSIGVVEKVKYSSWTVVPLD DARLRDLYQARRQLEPYMMTRAAEALEDAEIRRYLQRLDDAARAYPQVPSARLDALENDLHHEALARGNNAEIMTMLQRT RPILLISKHLLGSSIALPSVAPFFDEHRHVFDKALARDGGAAGRALDEHLARSEAQVQARLSDFREAGAIDVPNYLREVA PS
Sequences:
>Translated_322_residues MARSLKEQLYRVLRDAIDAGRLEPGLVLLEGHIAEHFCMSRSPVRQTLSRLHEEGAICRFEGRGYQVGPRPGEIVRRSLG TGDFSASRIERTDTWRTFAEGVERDVVLCSMKGRFELNELQLARALSVSRSLTHRILLYLQSIGVVEKVKYSSWTVVPLD DARLRDLYQARRQLEPYMMTRAAEALEDAEIRRYLQRLDDAARAYPQVPSARLDALENDLHHEALARGNNAEIMTMLQRT RPILLISKHLLGSSIALPSVAPFFDEHRHVFDKALARDGGAAGRALDEHLARSEAQVQARLSDFREAGAIDVPNYLREVA PS >Mature_321_residues ARSLKEQLYRVLRDAIDAGRLEPGLVLLEGHIAEHFCMSRSPVRQTLSRLHEEGAICRFEGRGYQVGPRPGEIVRRSLGT GDFSASRIERTDTWRTFAEGVERDVVLCSMKGRFELNELQLARALSVSRSLTHRILLYLQSIGVVEKVKYSSWTVVPLDD ARLRDLYQARRQLEPYMMTRAAEALEDAEIRRYLQRLDDAARAYPQVPSARLDALENDLHHEALARGNNAEIMTMLQRTR PILLISKHLLGSSIALPSVAPFFDEHRHVFDKALARDGGAAGRALDEHLARSEAQVQARLSDFREAGAIDVPNYLREVAP S
Specific function: Unknown
COG id: COG1802
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36377; Mature: 36246
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: PS50949 HTH_GNTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSLKEQLYRVLRDAIDAGRLEPGLVLLEGHIAEHFCMSRSPVRQTLSRLHEEGAICRF CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHCCCEEEE EGRGYQVGPRPGEIVRRSLGTGDFSASRIERTDTWRTFAEGVERDVVLCSMKGRFELNEL CCCCEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH QLARALSVSRSLTHRILLYLQSIGVVEKVKYSSWTVVPLDDARLRDLYQARRQLEPYMMT HHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCHHHHH RAAEALEDAEIRRYLQRLDDAARAYPQVPSARLDALENDLHHEALARGNNAEIMTMLQRT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC RPILLISKHLLGSSIALPSVAPFFDEHRHVFDKALARDGGAAGRALDEHLARSEAQVQAR CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LSDFREAGAIDVPNYLREVAPS HHHHHHCCCCCCHHHHHHHCCC >Mature Secondary Structure ARSLKEQLYRVLRDAIDAGRLEPGLVLLEGHIAEHFCMSRSPVRQTLSRLHEEGAICRF CHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHCCCEEEE EGRGYQVGPRPGEIVRRSLGTGDFSASRIERTDTWRTFAEGVERDVVLCSMKGRFELNEL CCCCEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH QLARALSVSRSLTHRILLYLQSIGVVEKVKYSSWTVVPLDDARLRDLYQARRQLEPYMMT HHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCHHHHH RAAEALEDAEIRRYLQRLDDAARAYPQVPSARLDALENDLHHEALARGNNAEIMTMLQRT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC RPILLISKHLLGSSIALPSVAPFFDEHRHVFDKALARDGGAAGRALDEHLARSEAQVQAR CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LSDFREAGAIDVPNYLREVAPS HHHHHHCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA