Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
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Accession | NC_007963 |
Length | 3,696,649 |
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The map label for this gene is uxaA [H]
Identifier: 92113872
GI number: 92113872
Start: 1993375
End: 1994907
Strand: Direct
Name: uxaA [H]
Synonym: Csal_1749
Alternate gene names: 92113872
Gene position: 1993375-1994907 (Clockwise)
Preceding gene: 92113866
Following gene: 92113873
Centisome position: 53.92
GC content: 66.54
Gene sequence:
>1533_bases ATGCAGCTCATCAATACGACGCCGCCGGTCATCCGGCTCAACGATGCCGACAACGTGGGGGTCGCGACCCGGGCCCTGCC ACAGGGACTGCCGCTGGACGGCGACGGCGAGCGGGTGGCGCGTCACAACATCGATGCCGGTCACAAGGTCGCCCTGACGG CCATCGCCACGGGCGACGCCATCATCAAGTACGGCCAGGTCATCGGGCGGGCGAGCCGCGACATCGACGTCGGCGAGCAC GTGCACACCCATAACGTGGCCATGCTCGAGCGGGACACGACCCTGACGGACTTCCAGCCGTTCCCGCGTTCGCCGACGCA GGACTCCGATCGCACCTTCATGGGCTACCATCGGCCGAACGGCCAGGTCGGAACCCGCAATTACATCGGTATCCTGTCGA CGGTGAACTGCTCGGCGACCGTGGCCAAGGTGGCCGCGGAGCAGCTCAATGCCAATCCCGAGATCGAGGCTCTCGGCTTC GACGGCGTGGTGCCCATCACGCATGGCTCGGGATGCGCGATGAACACCGAATCCGAAGGCTTCGCGTTCCTCGAGCGGGT GATCGCTGGCTATGCGCGGCATCCCAACTTCGCGCTGGTGGTGATCATCGGCCTGGGATGCGAAACCAACCAGGTCAAGC AGCTGGTGGAAAGCGCCGGGTTGAGCGACGAGCGTCGCCTGGCCTATTTCAACATCCAGCAGGTCGGCGGTACCCGGGCC AGCATCGGCAAGGCCTACGAGCAAGTGCTCGACATGGCGCGCGCACATGGGCGCGACGAGCGCCGTCCCGCGTCGCTCAA GCACTTGAGCGTGGCCCTGCAGTGCGGCGGTTCCGACGGGTATTCGGGGATCACCGCGAACCCCGCCCTGGGCCACGCCG CCGACTTGATCGTGCGTCACGGCGGCAGCGCCATCCTGAGCGAAACGCCGGAAATCTACGGCGCCGAGCACCTGCTGCTG GACCGCGCGGTGGACGTGGAGGTGGCGCGCAAGCTGCTGGCGCGGATCGCCTGGTGGAAGCACTATACCGAGATCAACGG CGCCGAGCTCAACAACAATCCGTCGCCCGGCAACAAGGCCGGCGGCCTCTCGACCATCCTCGAGAAGTCCCTGGGGGCCG TGGCCAAGGGCGGCGCCTCGAGCCTGAACGACGTGCTCGAATACGCCGAGCCGCTCAAGGTCCCCGGGTTCAACTTCATG GACAGCCCCGGGTACGATCCGGCCTCGGTCACCGGTCAGATCGCCTCCGGTGCCACCCTGGTGTGCTTCACCACGGGGCG GGGGTCGGTCTCCGGCTTCAAGCCGGCGCCGTGTCTCAAGCTGGCCACCAACACGGCCATGTATGAGACCATGCACGAGG ACATGGACATCAACTGCGGCGCCATCCTCGATGGCGAGATGAGCGTGGAGGCCATGGGCGAGGCGATTTTCGAGAAGATT CTCGCGGTCGCCTCCGGCGAGGCGAGTGCCAGCGAGTCGCTGGGCTATGGCAGCAACGAGTTCGTGCCGTGGATGGTCGG CGCCATCACCTGA
Upstream 100 bases:
>100_bases AGTTATAATTGAACATTGCGTGCAATATTCAATATTGTGACGTTAGTCGAATCCGCGCCCTTCGCGCACGCCCTGACGGT CAACGGTTACCGAGGTCATT
Downstream 100 bases:
>100_bases GTGCGGTGTCCCGGTGCCGAAGCCGTACGAGAAGACGCAGGGAAGACAGTCCAGGAGGAAAAGACAGCCCCATGGCCAGA TCGCTGAAAGAGCAGCTCTA
Product: Altronate dehydratase
Products: NA
Alternate protein names: Altronic acid hydratase [H]
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MQLINTTPPVIRLNDADNVGVATRALPQGLPLDGDGERVARHNIDAGHKVALTAIATGDAIIKYGQVIGRASRDIDVGEH VHTHNVAMLERDTTLTDFQPFPRSPTQDSDRTFMGYHRPNGQVGTRNYIGILSTVNCSATVAKVAAEQLNANPEIEALGF DGVVPITHGSGCAMNTESEGFAFLERVIAGYARHPNFALVVIIGLGCETNQVKQLVESAGLSDERRLAYFNIQQVGGTRA SIGKAYEQVLDMARAHGRDERRPASLKHLSVALQCGGSDGYSGITANPALGHAADLIVRHGGSAILSETPEIYGAEHLLL DRAVDVEVARKLLARIAWWKHYTEINGAELNNNPSPGNKAGGLSTILEKSLGAVAKGGASSLNDVLEYAEPLKVPGFNFM DSPGYDPASVTGQIASGATLVCFTTGRGSVSGFKPAPCLKLATNTAMYETMHEDMDINCGAILDGEMSVEAMGEAIFEKI LAVASGEASASESLGYGSNEFVPWMVGAIT
Sequences:
>Translated_510_residues MQLINTTPPVIRLNDADNVGVATRALPQGLPLDGDGERVARHNIDAGHKVALTAIATGDAIIKYGQVIGRASRDIDVGEH VHTHNVAMLERDTTLTDFQPFPRSPTQDSDRTFMGYHRPNGQVGTRNYIGILSTVNCSATVAKVAAEQLNANPEIEALGF DGVVPITHGSGCAMNTESEGFAFLERVIAGYARHPNFALVVIIGLGCETNQVKQLVESAGLSDERRLAYFNIQQVGGTRA SIGKAYEQVLDMARAHGRDERRPASLKHLSVALQCGGSDGYSGITANPALGHAADLIVRHGGSAILSETPEIYGAEHLLL DRAVDVEVARKLLARIAWWKHYTEINGAELNNNPSPGNKAGGLSTILEKSLGAVAKGGASSLNDVLEYAEPLKVPGFNFM DSPGYDPASVTGQIASGATLVCFTTGRGSVSGFKPAPCLKLATNTAMYETMHEDMDINCGAILDGEMSVEAMGEAIFEKI LAVASGEASASESLGYGSNEFVPWMVGAIT >Mature_510_residues MQLINTTPPVIRLNDADNVGVATRALPQGLPLDGDGERVARHNIDAGHKVALTAIATGDAIIKYGQVIGRASRDIDVGEH VHTHNVAMLERDTTLTDFQPFPRSPTQDSDRTFMGYHRPNGQVGTRNYIGILSTVNCSATVAKVAAEQLNANPEIEALGF DGVVPITHGSGCAMNTESEGFAFLERVIAGYARHPNFALVVIIGLGCETNQVKQLVESAGLSDERRLAYFNIQQVGGTRA SIGKAYEQVLDMARAHGRDERRPASLKHLSVALQCGGSDGYSGITANPALGHAADLIVRHGGSAILSETPEIYGAEHLLL DRAVDVEVARKLLARIAWWKHYTEINGAELNNNPSPGNKAGGLSTILEKSLGAVAKGGASSLNDVLEYAEPLKVPGFNFM DSPGYDPASVTGQIASGATLVCFTTGRGSVSGFKPAPCLKLATNTAMYETMHEDMDINCGAILDGEMSVEAMGEAIFEKI LAVASGEASASESLGYGSNEFVPWMVGAIT
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG2721
COG function: function code G; Altronate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uxaA family [H]
Homologues:
Organism=Escherichia coli, GI1789475, Length=491, Percent_Identity=37.0672097759674, Blast_Score=299, Evalue=2e-82, Organism=Escherichia coli, GI1789516, Length=502, Percent_Identity=35.6573705179283, Blast_Score=271, Evalue=6e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007392 - InterPro: IPR013974 [H]
Pfam domain/function: PF04295 GD_AH_C; PF08666 SAF [H]
EC number: =4.2.1.7 [H]
Molecular weight: Translated: 53981; Mature: 53981
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLINTTPPVIRLNDADNVGVATRALPQGLPLDGDGERVARHNIDAGHKVALTAIATGDA CCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCHH IIKYGQVIGRASRDIDVGEHVHTHNVAMLERDTTLTDFQPFPRSPTQDSDRTFMGYHRPN HHHHHHHHHCCCCCCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCC GQVGTRNYIGILSTVNCSATVAKVAAEQLNANPEIEALGFDGVVPITHGSGCAMNTESEG CCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCH FAFLERVIAGYARHPNFALVVIIGLGCETNQVKQLVESAGLSDERRLAYFNIQQVGGTRA HHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCHH SIGKAYEQVLDMARAHGRDERRPASLKHLSVALQCGGSDGYSGITANPALGHAADLIVRH HHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEEECCCCCCCCEECCCCCCHHHHHHHHC GGSAILSETPEIYGAEHLLLDRAVDVEVARKLLARIAWWKHYTEINGAELNNNPSPGNKA CCCCHHHCCCCHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GGLSTILEKSLGAVAKGGASSLNDVLEYAEPLKVPGFNFMDSPGYDPASVTGQIASGATL CHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCEEECCCCEE VCFTTGRGSVSGFKPAPCLKLATNTAMYETMHEDMDINCGAILDGEMSVEAMGEAIFEKI EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHH LAVASGEASASESLGYGSNEFVPWMVGAIT HHHHCCCCCCHHHCCCCCCCCCCEEEEECC >Mature Secondary Structure MQLINTTPPVIRLNDADNVGVATRALPQGLPLDGDGERVARHNIDAGHKVALTAIATGDA CCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCHH IIKYGQVIGRASRDIDVGEHVHTHNVAMLERDTTLTDFQPFPRSPTQDSDRTFMGYHRPN HHHHHHHHHCCCCCCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCC GQVGTRNYIGILSTVNCSATVAKVAAEQLNANPEIEALGFDGVVPITHGSGCAMNTESEG CCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCH FAFLERVIAGYARHPNFALVVIIGLGCETNQVKQLVESAGLSDERRLAYFNIQQVGGTRA HHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCHH SIGKAYEQVLDMARAHGRDERRPASLKHLSVALQCGGSDGYSGITANPALGHAADLIVRH HHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEEECCCCCCCCEECCCCCCHHHHHHHHC GGSAILSETPEIYGAEHLLLDRAVDVEVARKLLARIAWWKHYTEINGAELNNNPSPGNKA CCCCHHHCCCCHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GGLSTILEKSLGAVAKGGASSLNDVLEYAEPLKVPGFNFMDSPGYDPASVTGQIASGATL CHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCEEECCCCEE VCFTTGRGSVSGFKPAPCLKLATNTAMYETMHEDMDINCGAILDGEMSVEAMGEAIFEKI EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHH LAVASGEASASESLGYGSNEFVPWMVGAIT HHHHCCCCCCHHHCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]