Click here to switch to the map view.

The map label for this gene is yadD [C]

Identifier: 92113825

GI number: 92113825

Start: 1934686

End: 1935666

Strand: Direct

Name: yadD [C]

Synonym: Csal_1702

Alternate gene names: 92113825

Gene position: 1934686-1935666 (Clockwise)

Preceding gene: 92113824

Following gene: 92113826

Centisome position: 52.34

GC content: 59.12

Gene sequence:

>981_bases
ATGGCGAGTCACCCCCACCACCCTCACGACCACAGCTATAAGTTGCTGTTCTCACACCCTGAGATGGTGAGAGATCTATT
GACCGGGTTCGTCAAGGAAGCCTGGGTGGAACAACTCGACTTCTCGACACTGGAGAAGGTCAGCGGCTCCTATATCACCG
AAGATCTGCGAGATCGCGAGGACGACGTCATCTGGCGAGTGCGTTGGGGCGACGACTGGCTCTATGTTTATTTGCTGCTC
GAGTTTCAGTCGAGCGTCGATAGATTCATGGCCGTGCGAGTCATGACCTACCTGGGGCTGCTCTATCAGGACTTGATTCG
TCAGGAGGCCTTTACCCCCAATGGCAAGCTACCGCCAGTGTTGCCGATTGTGCTCTACAATGGGGAGAAGCGCTGGACGG
CGGCACAAAACGTGGCGGACCTGGTCGAACAGGTACCCGGAGGGCTCGAACGTTATCGGCCGAACTTGGCCTACCTGCTT
CTCGACGAAGGAGCGGTCATCAGCGATCCTGAGTGGTCGGATCACATGCGCAACGTGGCTGCTGCGCTCTTTCGATTGGA
GCACAATCGCGACGAGCAAGACATGCTGGAGGTGCTGGGCACGCTGGTCGAGTGGCTCAAGGCGCCCGAGCAAACCGGGC
TACGACGGGCCTTCGTGGTGTGGATACGCCGCGTACTGCTGCCCAACCGGGCGCCGGGGATGGAACTGCCCGAGTTCAAC
GAGTTGCAGGATCTACACGAGGTACACGACATGCTGGCAGAACGCATCAAGCAATGGCCTGAACGGTGGGAAGAGAAAGG
CCGTCAGGAAGGCCGTCAAGAAGGGCGTAAAGAAGGGCGTCAGGAAGGCGAACAACGGGGCATCGAGAAGACCGCCCGCA
ACCTGATCAAGCTGGGTGTACTCAGTGATGAACAGATCGCCGAGGCCACGGGGCTGACGGTGGCCGAGGTGGAAGGGCTG
CGCGAAGAAGACACGCAGTGA

Upstream 100 bases:

>100_bases
GGTAGTGAAAATACATTAGTAGTAGCGGATTTATTCGCGATAGTCCCTGTCCCAGGTGCCCGCAACGCGGTAAGCTTCCA
GCATTGGGACAGGAGCACGT

Downstream 100 bases:

>100_bases
TCGCGCGACGCTTGCGTTAACACAATCATGACTGAAGGCCCTCTCACAAGAGCACTCCGCAAGGCATCCCGCATTACTCG
ACCCCACCAATGATTACGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MASHPHHPHDHSYKLLFSHPEMVRDLLTGFVKEAWVEQLDFSTLEKVSGSYITEDLRDREDDVIWRVRWGDDWLYVYLLL
EFQSSVDRFMAVRVMTYLGLLYQDLIRQEAFTPNGKLPPVLPIVLYNGEKRWTAAQNVADLVEQVPGGLERYRPNLAYLL
LDEGAVISDPEWSDHMRNVAAALFRLEHNRDEQDMLEVLGTLVEWLKAPEQTGLRRAFVVWIRRVLLPNRAPGMELPEFN
ELQDLHEVHDMLAERIKQWPERWEEKGRQEGRQEGRKEGRQEGEQRGIEKTARNLIKLGVLSDEQIAEATGLTVAEVEGL
REEDTQ

Sequences:

>Translated_326_residues
MASHPHHPHDHSYKLLFSHPEMVRDLLTGFVKEAWVEQLDFSTLEKVSGSYITEDLRDREDDVIWRVRWGDDWLYVYLLL
EFQSSVDRFMAVRVMTYLGLLYQDLIRQEAFTPNGKLPPVLPIVLYNGEKRWTAAQNVADLVEQVPGGLERYRPNLAYLL
LDEGAVISDPEWSDHMRNVAAALFRLEHNRDEQDMLEVLGTLVEWLKAPEQTGLRRAFVVWIRRVLLPNRAPGMELPEFN
ELQDLHEVHDMLAERIKQWPERWEEKGRQEGRQEGRKEGRQEGEQRGIEKTARNLIKLGVLSDEQIAEATGLTVAEVEGL
REEDTQ
>Mature_325_residues
ASHPHHPHDHSYKLLFSHPEMVRDLLTGFVKEAWVEQLDFSTLEKVSGSYITEDLRDREDDVIWRVRWGDDWLYVYLLLE
FQSSVDRFMAVRVMTYLGLLYQDLIRQEAFTPNGKLPPVLPIVLYNGEKRWTAAQNVADLVEQVPGGLERYRPNLAYLLL
DEGAVISDPEWSDHMRNVAAALFRLEHNRDEQDMLEVLGTLVEWLKAPEQTGLRRAFVVWIRRVLLPNRAPGMELPEFNE
LQDLHEVHDMLAERIKQWPERWEEKGRQEGRQEGRKEGRQEGEQRGIEKTARNLIKLGVLSDEQIAEATGLTVAEVEGLR
EEDTQ

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1786324, Length=313, Percent_Identity=28.7539936102236, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789816, Length=121, Percent_Identity=33.0578512396694, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788643, Length=297, Percent_Identity=25.2525252525253, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788577, Length=319, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 37988; Mature: 37856

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASHPHHPHDHSYKLLFSHPEMVRDLLTGFVKEAWVEQLDFSTLEKVSGSYITEDLRDRE
CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
DDVIWRVRWGDDWLYVYLLLEFQSSVDRFMAVRVMTYLGLLYQDLIRQEAFTPNGKLPPV
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
LPIVLYNGEKRWTAAQNVADLVEQVPGGLERYRPNLAYLLLDEGAVISDPEWSDHMRNVA
EEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEECCCEECCCCHHHHHHHHH
AALFRLEHNRDEQDMLEVLGTLVEWLKAPEQTGLRRAFVVWIRRVLLPNRAPGMELPEFN
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
ELQDLHEVHDMLAERIKQWPERWEEKGRQEGRQEGRKEGRQEGEQRGIEKTARNLIKLGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LSDEQIAEATGLTVAEVEGLREEDTQ
CCCHHHHHHHCCHHHHHHCCHHCCCC
>Mature Secondary Structure 
ASHPHHPHDHSYKLLFSHPEMVRDLLTGFVKEAWVEQLDFSTLEKVSGSYITEDLRDRE
CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
DDVIWRVRWGDDWLYVYLLLEFQSSVDRFMAVRVMTYLGLLYQDLIRQEAFTPNGKLPPV
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
LPIVLYNGEKRWTAAQNVADLVEQVPGGLERYRPNLAYLLLDEGAVISDPEWSDHMRNVA
EEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEECCCEECCCCHHHHHHHHH
AALFRLEHNRDEQDMLEVLGTLVEWLKAPEQTGLRRAFVVWIRRVLLPNRAPGMELPEFN
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
ELQDLHEVHDMLAERIKQWPERWEEKGRQEGRQEGRKEGRQEGEQRGIEKTARNLIKLGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LSDEQIAEATGLTVAEVEGLREEDTQ
CCCHHHHHHHCCHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]