Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
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Accession | NC_007963 |
Length | 3,696,649 |
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The map label for this gene is yehZ [C]
Identifier: 92113824
GI number: 92113824
Start: 1933469
End: 1934443
Strand: Direct
Name: yehZ [C]
Synonym: Csal_1701
Alternate gene names: 92113824
Gene position: 1933469-1934443 (Clockwise)
Preceding gene: 92113822
Following gene: 92113825
Centisome position: 52.3
GC content: 65.54
Gene sequence:
>975_bases TTGAGCAACCAGCTACCGACCGGGCGCAGCGCCCTGATGTTCAGCACGGCCCTGGCCGCTTTGCTTCTGGCAGCGCCTTC CGTGTCGGCCAATGAGGCCGAGCAGGAAGCGTCGGCCAGCAAGCACGGACCGGAAACCATCGCCAACCAGTTCGTGTTCG GCTCCGGCAAGGAGTGCCCGCATGAGCCGTACTGCCTGCCCGCGCTCGAGGAAGAGTATGGCTTGCACTTCGCCGATTTC GTGGTCACCGACCCCGGGGGGCCGCGCACGCGCGAGGCGCTTCTGAACGGCGACATCCAGATTGGCGTGCTCTTCACTAC CAACGGGTATCTCGCCACTGACCGCTTCGTCCTGCTGGAGGACGATCGTAACGCCCAGCCGGCGGAAAACGTCATTCCGG TGGCCCACCAGTCCATCGGCGACGCCTACCCCGAGCTCGGCGAGGTGCTCGATCCGCTCAGCGCCGTCCTGACGACCCCG GAGCTGGCCGAGATGAATCGACGCTTCGCGCTCGACGGGGTGGACGCGGAGACCATCGCCCGAGAGTGGCTCAAGGAGCA CGGCGCGCCCGCGCCTGCGGAGAGTGCGCCGGAAAAAGAGGGCCCCACCATCGTGGTCGGCTCCGGTAACTTCGCCGAGA GCATCATCCTGGCGGAAATGTACCACCAGGCGCTCGACCAGGCGGGATATCCCACCCGGCATCGGCAGGAAATCGGCAAC CGCGCCACCTATCTTCCCCTGCTCGAAAGTGGCGAGATCGACCTGTTCCCGGAATACACCGGCAGTCTGGGTGGCTGGCT GAACACGCTCGCCGACACGAGCGGGCAACCCCTGTCGGCATTGCTGCCCGAACATGACCTGGTGGGCTTCGAGCCAGCCC CTGCGCAAGACAAGAACGGCTTCGTGGTCACCGCCGAGACCGCACAGCGCTATGATCTCGAAAAGATCAGCGATCTGGCG AAGCCCGCTCCCTGA
Upstream 100 bases:
>100_bases TGTTCATTGCGTGTCGAACGTCGATGCCGGCGATGGGGCTCGGCGCCTCGGCAACGCCTGATAATCTGACACACAACTTC AATATGATGGGGTGATCGAA
Downstream 100 bases:
>100_bases AGCCTGTTCTCTCCTGAAGTTCGTTCTCTAGAGGAATGCTGCATAAAGCCCGCCGCAGCGCACTAACGTCACGATAGGGC GTTGCGCTAGTAGCCACGTT
Product: periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSNQLPTGRSALMFSTALAALLLAAPSVSANEAEQEASASKHGPETIANQFVFGSGKECPHEPYCLPALEEEYGLHFADF VVTDPGGPRTREALLNGDIQIGVLFTTNGYLATDRFVLLEDDRNAQPAENVIPVAHQSIGDAYPELGEVLDPLSAVLTTP ELAEMNRRFALDGVDAETIAREWLKEHGAPAPAESAPEKEGPTIVVGSGNFAESIILAEMYHQALDQAGYPTRHRQEIGN RATYLPLLESGEIDLFPEYTGSLGGWLNTLADTSGQPLSALLPEHDLVGFEPAPAQDKNGFVVTAETAQRYDLEKISDLA KPAP
Sequences:
>Translated_324_residues MSNQLPTGRSALMFSTALAALLLAAPSVSANEAEQEASASKHGPETIANQFVFGSGKECPHEPYCLPALEEEYGLHFADF VVTDPGGPRTREALLNGDIQIGVLFTTNGYLATDRFVLLEDDRNAQPAENVIPVAHQSIGDAYPELGEVLDPLSAVLTTP ELAEMNRRFALDGVDAETIAREWLKEHGAPAPAESAPEKEGPTIVVGSGNFAESIILAEMYHQALDQAGYPTRHRQEIGN RATYLPLLESGEIDLFPEYTGSLGGWLNTLADTSGQPLSALLPEHDLVGFEPAPAQDKNGFVVTAETAQRYDLEKISDLA KPAP >Mature_323_residues SNQLPTGRSALMFSTALAALLLAAPSVSANEAEQEASASKHGPETIANQFVFGSGKECPHEPYCLPALEEEYGLHFADFV VTDPGGPRTREALLNGDIQIGVLFTTNGYLATDRFVLLEDDRNAQPAENVIPVAHQSIGDAYPELGEVLDPLSAVLTTPE LAEMNRRFALDGVDAETIAREWLKEHGAPAPAESAPEKEGPTIVVGSGNFAESIILAEMYHQALDQAGYPTRHRQEIGNR ATYLPLLESGEIDLFPEYTGSLGGWLNTLADTSGQPLSALLPEHDLVGFEPAPAQDKNGFVVTAETAQRYDLEKISDLAK PAP
Specific function: Unknown
COG id: COG1732
COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34762; Mature: 34631
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQLPTGRSALMFSTALAALLLAAPSVSANEAEQEASASKHGPETIANQFVFGSGKECP CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHEECCCCCCC HEPYCLPALEEEYGLHFADFVVTDPGGPRTREALLNGDIQIGVLFTTNGYLATDRFVLLE CCCCCCCCCHHHHCCEEEEEEEECCCCCHHHHHHHCCCEEEEEEEECCCEEEECEEEEEE DDRNAQPAENVIPVAHQSIGDAYPELGEVLDPLSAVLTTPELAEMNRRFALDGVDAETIA CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEECCCCHHHHH REWLKEHGAPAPAESAPEKEGPTIVVGSGNFAESIILAEMYHQALDQAGYPTRHRQEIGN HHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC RATYLPLLESGEIDLFPEYTGSLGGWLNTLADTSGQPLSALLPEHDLVGFEPAPAQDKNG CCEEEEEEECCCEEECHHHHCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCC FVVTAETAQRYDLEKISDLAKPAP EEEEECCHHHCCHHHHHHHHCCCC >Mature Secondary Structure SNQLPTGRSALMFSTALAALLLAAPSVSANEAEQEASASKHGPETIANQFVFGSGKECP CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHEECCCCCCC HEPYCLPALEEEYGLHFADFVVTDPGGPRTREALLNGDIQIGVLFTTNGYLATDRFVLLE CCCCCCCCCHHHHCCEEEEEEEECCCCCHHHHHHHCCCEEEEEEEECCCEEEECEEEEEE DDRNAQPAENVIPVAHQSIGDAYPELGEVLDPLSAVLTTPELAEMNRRFALDGVDAETIA CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEECCCCHHHHH REWLKEHGAPAPAESAPEKEGPTIVVGSGNFAESIILAEMYHQALDQAGYPTRHRQEIGN HHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC RATYLPLLESGEIDLFPEYTGSLGGWLNTLADTSGQPLSALLPEHDLVGFEPAPAQDKNG CCEEEEEEECCCEEECHHHHCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCC FVVTAETAQRYDLEKISDLAKPAP EEEEECCHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA