Click here to switch to the map view.

The map label for this gene is 92113732

Identifier: 92113732

GI number: 92113732

Start: 1828253

End: 1828582

Strand: Direct

Name: 92113732

Synonym: Csal_1608

Alternate gene names: NA

Gene position: 1828253-1828582 (Clockwise)

Preceding gene: 92113731

Following gene: 92113733

Centisome position: 49.46

GC content: 66.97

Gene sequence:

>330_bases
GTGGCGCAAAAAGCCTTGTCCCTGACATTTCACGATACCCAGACCCTGCACGCGGCCTACATGCCCTGGTTGCAGCGCGG
CGGCATCTTCGTGCCCACGTCGGAGCGCTATTCGCTCGGCGATACGGTGTACCTGCTGGTGACCCTGCCGGAGGAAAGCG
AGCGCCTGCCGGTGTCGGGGAGCGTCGCCTGGCTGTCGCCGCCCGGCATCGGGGGGCGGCGCGTGCCGGGCATCGGGGTG
CATTTCAGCGCCGACGACCAGCGCGTGAAGACGTTGATCGAGGCGTGTCTCGACGGTGTCACGCCGACGCGTCCCAGCTA
TACCCTTTGA

Upstream 100 bases:

>100_bases
TTGCTGCGATCTTGACGGTGCCGTGGCGTCGCCGACGGTGCGGCGATCGTGTCCGGTCGCTTCCGCATCGGTCCGATGCC
CTTGTTACGGAGTGTTCTGC

Downstream 100 bases:

>100_bases
TTCATGCCGCGGGCCGTGTGCCGGCCCGTTCGATCGTTTAGGTACCCCATGTTCGTTGATTCCCATTGTCACCTCGACCG
ACTCGATCTCGCCGCCCATG

Product: type IV pilus assembly PilZ

Products: NA

Alternate protein names: Type 4 Fimbrial Biogenesis Protein PilZ; Type IV Pilus Assembly Protein PilZ; Type IV Fimbriae Assembly Protein; Type IV Pilus Assembly Protein; Type 4 Fimbrial Biogenesis Protein; Type IV Pilus Biogenesis Protein PilZ; Pilus Biogenesis Protein PilZ; Type Iv Pilus Assembly Pilz; Type IV Fimbrial Biogenesis Protein PilZ; Tfp Pilus Assembly Protein; Tfp Pilus Assembly Protein PilZ

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MAQKALSLTFHDTQTLHAAYMPWLQRGGIFVPTSERYSLGDTVYLLVTLPEESERLPVSGSVAWLSPPGIGGRRVPGIGV
HFSADDQRVKTLIEACLDGVTPTRPSYTL

Sequences:

>Translated_109_residues
MAQKALSLTFHDTQTLHAAYMPWLQRGGIFVPTSERYSLGDTVYLLVTLPEESERLPVSGSVAWLSPPGIGGRRVPGIGV
HFSADDQRVKTLIEACLDGVTPTRPSYTL
>Mature_108_residues
AQKALSLTFHDTQTLHAAYMPWLQRGGIFVPTSERYSLGDTVYLLVTLPEESERLPVSGSVAWLSPPGIGGRRVPGIGVH
FSADDQRVKTLIEACLDGVTPTRPSYTL

Specific function: Unknown

COG id: COG3215

COG function: function code NU; Tfp pilus assembly protein PilZ

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11898; Mature: 11767

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQKALSLTFHDTQTLHAAYMPWLQRGGIFVPTSERYSLGDTVYLLVTLPEESERLPVSG
CCCCEEEEEECCCCHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCC
SVAWLSPPGIGGRRVPGIGVHFSADDQRVKTLIEACLDGVTPTRPSYTL
CEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AQKALSLTFHDTQTLHAAYMPWLQRGGIFVPTSERYSLGDTVYLLVTLPEESERLPVSG
CCCEEEEEECCCCHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCC
SVAWLSPPGIGGRRVPGIGVHFSADDQRVKTLIEACLDGVTPTRPSYTL
CEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA