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The map label for this gene is ycaR [C]

Identifier: 92113712

GI number: 92113712

Start: 1808978

End: 1809193

Strand: Direct

Name: ycaR [C]

Synonym: Csal_1588

Alternate gene names: 92113712

Gene position: 1808978-1809193 (Clockwise)

Preceding gene: 92113711

Following gene: 92113713

Centisome position: 48.94

GC content: 61.57

Gene sequence:

>216_bases
ATGGATAAGGAATTGCTGGCGATGCTGGTCTGCCCCCGCTGTCAGGGCAAGCTGAAGTACGACCGCGAACGTGCGGAACT
CAAATGCCACTTCGACGGACTGGCGTTTCCCATCGAGGACGAGATTCCGGTGATGCTCGAAGAGCAGGCGCGCCACATGG
ATGCCGACGAAAAGCTGGGCAAGGCGCCGGGCGAGGCGCGGGATGCCACCTCATGA

Upstream 100 bases:

>100_bases
TCATGAACGTTGCTGGGTGCTCGATGTGGAAGCGCATCCCGACGCCGCATTCGTGACATGGCTGGAGGGCCGCTTGGCGG
CGCTGACCGAGAGGTGATGC

Downstream 100 bases:

>100_bases
GTGATGTCGTGGTCGTGATACCGGCACGCTATGGCGCCTCGCGCCTGCCGGGCAAGCCCTTGCTGGACCTCCACGGCGAA
CCGATGATCGCCCGCGTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MDKELLAMLVCPRCQGKLKYDRERAELKCHFDGLAFPIEDEIPVMLEEQARHMDADEKLGKAPGEARDATS

Sequences:

>Translated_71_residues
MDKELLAMLVCPRCQGKLKYDRERAELKCHFDGLAFPIEDEIPVMLEEQARHMDADEKLGKAPGEARDATS
>Mature_71_residues
MDKELLAMLVCPRCQGKLKYDRERAELKCHFDGLAFPIEDEIPVMLEEQARHMDADEKLGKAPGEARDATS

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

Organism=Escherichia coli, GI1787146, Length=58, Percent_Identity=53.448275862069, Blast_Score=70, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1588_CHRSD (Q1QX67)

Other databases:

- EMBL:   CP000285
- RefSeq:   YP_573640.1
- ProteinModelPortal:   Q1QX67
- SMR:   Q1QX67
- STRING:   Q1QX67
- GeneID:   4027607
- GenomeReviews:   CP000285_GR
- KEGG:   csa:Csal_1588
- NMPDR:   fig|290398.4.peg.3043
- eggNOG:   COG2835
- HOGENOM:   HBG713593
- OMA:   YDSENEQ
- BioCyc:   CSAL290398:CSAL_1588-MONOMER
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: NA

Molecular weight: Translated: 8061; Mature: 8061

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
9.9 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
9.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKELLAMLVCPRCQGKLKYDRERAELKCHFDGLAFPIEDEIPVMLEEQARHMDADEKLG
CCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCCCEEHHHHHCCCCHHHHC
KAPGEARDATS
CCCCCCCCCCC
>Mature Secondary Structure
MDKELLAMLVCPRCQGKLKYDRERAELKCHFDGLAFPIEDEIPVMLEEQARHMDADEKLG
CCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCCCEEHHHHHCCCCHHHHC
KAPGEARDATS
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA