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The map label for this gene is aapJ [H]

Identifier: 92112255

GI number: 92112255

Start: 142200

End: 143228

Strand: Direct

Name: aapJ [H]

Synonym: Csal_0120

Alternate gene names: 92112255

Gene position: 142200-143228 (Clockwise)

Preceding gene: 92112254

Following gene: 92112256

Centisome position: 3.85

GC content: 60.64

Gene sequence:

>1029_bases
ATGCTTTATAAGAACAAGTTCATTGTTGCCGTTCCGGCTGCCCTGCTACTCAGTGGTTTCGCGACTGCCTCCCAGGCGGC
GACCCTCGACGACGTCAAGGAGCGTGGCAACCTCAATTGCGGGGTCAACGTCGGTCTGGCCGGGTTCTCGGCACCGGATG
CCGACGGCAACTGGCAAGGGCTCGATGTGGAAACCTGCCGGGGCATCGCCTCCGCGATCTTCGGCGATCCCGATAACGTC
GTCTTTACCCCGTTGACCGCGAAGGAGCGCTTCACCGCGCTGCAGTCCGGCGAAATCGACGTGCTGTCACGCAACACGAC
CTGGACGGCGACGCGTGACAACTCTCTCGGTCTGAACTTCACCGCGACCACCTTCTACGACGGTCAAGGTTTCATGGTGA
GCAAGGATCTGAATATCGAGAGCCTGGAAGGCCTCAACGGCGCTTCCATCTGCATTCAGTCCGGCACCACGCACGAGCTG
AACCTGGCCGATTACTTTCCCTCCCGCGATATCGAGATCAAGACCGTCACGTTCGACACGCCCGACCAGACCGCTCAGGG
GTTCGCTCACGGGCGCTGTGACGTGCTGACCTCCGATACTTCTCAGCTGAGCGCGTTGCGCCTGCAATTGCCCGAACCGG
ATAGCGTCGAGATCCTCGAGACGCTGATTTCCAAGGAACCGCTGGGGCCGGTGGTGCGCCAGGGGGACGACCAATGGCTG
GATATCGTGCAGTGGACCATCTTCGCCATGGTCAACGCCGAGGAAATGGGCGTTAACAGCGACAACGTCGACGAAATGCG
CGATAACCCGCCCAACCCCGGGGTAGCACGCCTGCTGGGCAAGGATGGCAACTATGGCGAGCAACTCGGTCTGCCCAACG
ACTGGGCGTACAACATCATCAAGAACGTCGGCAACTACGGCGAAGTGTTCGCGACCACCGTGGGCGAAGACTCGCCGCTG
AAGATTCAGCGTGGCATGAACGCCCTCTGGAACGAAGGCGGGATTCTCTATGCACCGCCGATTCGCTGA

Upstream 100 bases:

>100_bases
GACACGTGACTTAGGTATATTGGCTGGGATGGCAAGCTCTTTGCTAATGTGATGCGTGGCTCTCGTATAAGCCACCACAA
TAAACGCAAGGAGCTTCTGC

Downstream 100 bases:

>100_bases
TACGGCCTGTGAGTACCGGGATCTCTAAGTACCGACGCTGTCGAGTACCGAGGTCTTCAAGTACGCCGCGTGGGCGAGTA
TTTCGCCCACGCTCCCAGCA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MLYKNKFIVAVPAALLLSGFATASQAATLDDVKERGNLNCGVNVGLAGFSAPDADGNWQGLDVETCRGIASAIFGDPDNV
VFTPLTAKERFTALQSGEIDVLSRNTTWTATRDNSLGLNFTATTFYDGQGFMVSKDLNIESLEGLNGASICIQSGTTHEL
NLADYFPSRDIEIKTVTFDTPDQTAQGFAHGRCDVLTSDTSQLSALRLQLPEPDSVEILETLISKEPLGPVVRQGDDQWL
DIVQWTIFAMVNAEEMGVNSDNVDEMRDNPPNPGVARLLGKDGNYGEQLGLPNDWAYNIIKNVGNYGEVFATTVGEDSPL
KIQRGMNALWNEGGILYAPPIR

Sequences:

>Translated_342_residues
MLYKNKFIVAVPAALLLSGFATASQAATLDDVKERGNLNCGVNVGLAGFSAPDADGNWQGLDVETCRGIASAIFGDPDNV
VFTPLTAKERFTALQSGEIDVLSRNTTWTATRDNSLGLNFTATTFYDGQGFMVSKDLNIESLEGLNGASICIQSGTTHEL
NLADYFPSRDIEIKTVTFDTPDQTAQGFAHGRCDVLTSDTSQLSALRLQLPEPDSVEILETLISKEPLGPVVRQGDDQWL
DIVQWTIFAMVNAEEMGVNSDNVDEMRDNPPNPGVARLLGKDGNYGEQLGLPNDWAYNIIKNVGNYGEVFATTVGEDSPL
KIQRGMNALWNEGGILYAPPIR
>Mature_342_residues
MLYKNKFIVAVPAALLLSGFATASQAATLDDVKERGNLNCGVNVGLAGFSAPDADGNWQGLDVETCRGIASAIFGDPDNV
VFTPLTAKERFTALQSGEIDVLSRNTTWTATRDNSLGLNFTATTFYDGQGFMVSKDLNIESLEGLNGASICIQSGTTHEL
NLADYFPSRDIEIKTVTFDTPDQTAQGFAHGRCDVLTSDTSQLSALRLQLPEPDSVEILETLISKEPLGPVVRQGDDQWL
DIVQWTIFAMVNAEEMGVNSDNVDEMRDNPPNPGVARLLGKDGNYGEQLGLPNDWAYNIIKNVGNYGEVFATTVGEDSPL
KIQRGMNALWNEGGILYAPPIR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=225, Percent_Identity=24, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 37031; Mature: 37031

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYKNKFIVAVPAALLLSGFATASQAATLDDVKERGNLNCGVNVGLAGFSAPDADGNWQG
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCC
LDVETCRGIASAIFGDPDNVVFTPLTAKERFTALQSGEIDVLSRNTTWTATRDNSLGLNF
CCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCEEEEECCCEEEEECCCCCCEEE
TATTFYDGQGFMVSKDLNIESLEGLNGASICIQSGTTHELNLADYFPSRDIEIKTVTFDT
EEEEEECCCCEEEECCCCHHHHCCCCCCEEEEECCCCCEEEHHHCCCCCCEEEEEEEECC
PDQTAQGFAHGRCDVLTSDTSQLSALRLQLPEPDSVEILETLISKEPLGPVVRQGDDQWL
CCHHHHCCCCCCEEEEECCHHHEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHCCCHHHH
DIVQWTIFAMVNAEEMGVNSDNVDEMRDNPPNPGVARLLGKDGNYGEQLGLPNDWAYNII
HHHHHHHHHEECHHHHCCCCCCHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHH
KNVGNYGEVFATTVGEDSPLKIQRGMNALWNEGGILYAPPIR
HHCCCCCCEEEEECCCCCCCHHHHCCHHHHCCCCEEECCCCC
>Mature Secondary Structure
MLYKNKFIVAVPAALLLSGFATASQAATLDDVKERGNLNCGVNVGLAGFSAPDADGNWQG
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCC
LDVETCRGIASAIFGDPDNVVFTPLTAKERFTALQSGEIDVLSRNTTWTATRDNSLGLNF
CCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCEEEEECCCEEEEECCCCCCEEE
TATTFYDGQGFMVSKDLNIESLEGLNGASICIQSGTTHELNLADYFPSRDIEIKTVTFDT
EEEEEECCCCEEEECCCCHHHHCCCCCCEEEEECCCCCEEEHHHCCCCCCEEEEEEEECC
PDQTAQGFAHGRCDVLTSDTSQLSALRLQLPEPDSVEILETLISKEPLGPVVRQGDDQWL
CCHHHHCCCCCCEEEEECCHHHEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHCCCHHHH
DIVQWTIFAMVNAEEMGVNSDNVDEMRDNPPNPGVARLLGKDGNYGEQLGLPNDWAYNII
HHHHHHHHHEECHHHHCCCCCCHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHH
KNVGNYGEVFATTVGEDSPLKIQRGMNALWNEGGILYAPPIR
HHCCCCCCEEEEECCCCCCCHHHHCCHHHHCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]