Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790358

Identifier: 91790358

GI number: 91790358

Start: 4785697

End: 4786710

Strand: Reverse

Name: 91790358

Synonym: Bpro_4526

Alternate gene names: NA

Gene position: 4786710-4785697 (Counterclockwise)

Preceding gene: 91790359

Following gene: 91790356

Centisome position: 92.05

GC content: 65.09

Gene sequence:

>1014_bases
ATGACGACACATCTCTCTCGCCGCAAGGCCGTTCTTGGTTTGGGTGGCCTGGGCCTGGGCGGTTTGCTCCCATTGCCGGC
CACGGTGAGCGCCGCGGACCTCCCCACCCCGGGCTGGCCCTCAAAGCCCATCACCTATGTTGTTCCGTTCACGCCGGGTG
GTTCCACCGACGTGATTGGCCGGACGCTGTCGCAGAAGCTGGCCGAAATACTGGGCCAGCCGGTGATCGTCGACAACAAG
CCGGGGGCCGCCGGTGCCGTGGGCGCGACCTACGTGGCCAAGGCCAGGGCGGATGGCCACACGCTGCTGGGTGGCACCAT
CAGCACGCACGCCATCAATGCCAGCCTCTACAAAAACCTGCCGTACGACCCCGTGAAGGACTTTGAGCCGGTGGCACTGG
TCGCCATGCTGCCCAATGTGTTGATCGTCAACCCCAACCTGGGCATCAATTCGGTGGCGGACCTGGTGGCCTTGCTCAAG
CGCGAACCGTCCCGGCGCAACTTCGCCTCCTCGGGCGCGGGCACTTCGACCCATCTGGCCGGCGAGATGTTTGCCGACCT
GATTGGCGTGCCGCTCACCCACATCGCCTACAAAGGCACACCGCCCGCCATGCTGGATGTCTCGTCCGGCCAGGTGACCT
TCATGTTTGACCAGATGACGGCCGCCGTGTCGCTGGCCCAGGCCGGCCGGCTCAAGCTGCTCGCGGTGACCACCCCCAAA
CGCATGGCGCTGGCACCCAGCCTGCCCACCATGATGGAAGCGGGCATCAAGAACTTCCAGATGGCCTCGTGGCAGGCGGT
GTATGCGCCCAAGGGAACACCGCAGCCCATCGTGCAGCGGCTCAATGTCGAGATTGTCAAAATCCTGAAGATGCCGGACG
TGGCGGCCAAGCTGACCGACCAGCTCGGCATGGAGATCGTGGGCAGCTCGCCCGAAGAACTCGCGGCGCACATGAAGTCC
GAGATCGCGCGCTGGGCCGAGCTCGTGAAGAAGTCCGGCGCGACAGCAAGCTGA

Upstream 100 bases:

>100_bases
CCAGGTTCGTGTTTTATAATAAATTGTTAGCGCTAACATTCTGTTTTTCGGCGCATCTATCTTGTTGCCTGTATGCAACG
CTCTTCATAAGGAAACCGTG

Downstream 100 bases:

>100_bases
TACGGGAACCGCGCCGGGACTCGGTGCCATGCATGCAGCAGCGGCCCGATGCTGCCGCTGGGTTGCACCTGATCGGATGT
CTGCTGACATTCAGTCGCGC

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MTTHLSRRKAVLGLGGLGLGGLLPLPATVSAADLPTPGWPSKPITYVVPFTPGGSTDVIGRTLSQKLAEILGQPVIVDNK
PGAAGAVGATYVAKARADGHTLLGGTISTHAINASLYKNLPYDPVKDFEPVALVAMLPNVLIVNPNLGINSVADLVALLK
REPSRRNFASSGAGTSTHLAGEMFADLIGVPLTHIAYKGTPPAMLDVSSGQVTFMFDQMTAAVSLAQAGRLKLLAVTTPK
RMALAPSLPTMMEAGIKNFQMASWQAVYAPKGTPQPIVQRLNVEIVKILKMPDVAAKLTDQLGMEIVGSSPEELAAHMKS
EIARWAELVKKSGATAS

Sequences:

>Translated_337_residues
MTTHLSRRKAVLGLGGLGLGGLLPLPATVSAADLPTPGWPSKPITYVVPFTPGGSTDVIGRTLSQKLAEILGQPVIVDNK
PGAAGAVGATYVAKARADGHTLLGGTISTHAINASLYKNLPYDPVKDFEPVALVAMLPNVLIVNPNLGINSVADLVALLK
REPSRRNFASSGAGTSTHLAGEMFADLIGVPLTHIAYKGTPPAMLDVSSGQVTFMFDQMTAAVSLAQAGRLKLLAVTTPK
RMALAPSLPTMMEAGIKNFQMASWQAVYAPKGTPQPIVQRLNVEIVKILKMPDVAAKLTDQLGMEIVGSSPEELAAHMKS
EIARWAELVKKSGATAS
>Mature_336_residues
TTHLSRRKAVLGLGGLGLGGLLPLPATVSAADLPTPGWPSKPITYVVPFTPGGSTDVIGRTLSQKLAEILGQPVIVDNKP
GAAGAVGATYVAKARADGHTLLGGTISTHAINASLYKNLPYDPVKDFEPVALVAMLPNVLIVNPNLGINSVADLVALLKR
EPSRRNFASSGAGTSTHLAGEMFADLIGVPLTHIAYKGTPPAMLDVSSGQVTFMFDQMTAAVSLAQAGRLKLLAVTTPKR
MALAPSLPTMMEAGIKNFQMASWQAVYAPKGTPQPIVQRLNVEIVKILKMPDVAAKLTDQLGMEIVGSSPEELAAHMKSE
IARWAELVKKSGATAS

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 35224; Mature: 35092

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHLSRRKAVLGLGGLGLGGLLPLPATVSAADLPTPGWPSKPITYVVPFTPGGSTDVIG
CCCCCCHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHH
RTLSQKLAEILGQPVIVDNKPGAAGAVGATYVAKARADGHTLLGGTISTHAINASLYKNL
HHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHEECHHHHHCC
PYDPVKDFEPVALVAMLPNVLIVNPNLGINSVADLVALLKREPSRRNFASSGAGTSTHLA
CCCCCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
GEMFADLIGVPLTHIAYKGTPPAMLDVSSGQVTFMFDQMTAAVSLAQAGRLKLLAVTTPK
HHHHHHHHCCCHHHEEECCCCCCEEECCCCEEEEEEHHHHHHHHHHHCCCEEEEEECCCC
RMALAPSLPTMMEAGIKNFQMASWQAVYAPKGTPQPIVQRLNVEIVKILKMPDVAAKLTD
HHEECCCCHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHCHHHHHHHCCCHHHHHHHH
QLGMEIVGSSPEELAAHMKSEIARWAELVKKSGATAS
HHCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TTHLSRRKAVLGLGGLGLGGLLPLPATVSAADLPTPGWPSKPITYVVPFTPGGSTDVIG
CCCCCHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHH
RTLSQKLAEILGQPVIVDNKPGAAGAVGATYVAKARADGHTLLGGTISTHAINASLYKNL
HHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHEECHHHHHCC
PYDPVKDFEPVALVAMLPNVLIVNPNLGINSVADLVALLKREPSRRNFASSGAGTSTHLA
CCCCCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
GEMFADLIGVPLTHIAYKGTPPAMLDVSSGQVTFMFDQMTAAVSLAQAGRLKLLAVTTPK
HHHHHHHHCCCHHHEEECCCCCCEEECCCCEEEEEEHHHHHHHHHHHCCCEEEEEECCCC
RMALAPSLPTMMEAGIKNFQMASWQAVYAPKGTPQPIVQRLNVEIVKILKMPDVAAKLTD
HHEECCCCHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHCHHHHHHHCCCHHHHHHHH
QLGMEIVGSSPEELAAHMKSEIARWAELVKKSGATAS
HHCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]