Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91790358
Identifier: 91790358
GI number: 91790358
Start: 4785697
End: 4786710
Strand: Reverse
Name: 91790358
Synonym: Bpro_4526
Alternate gene names: NA
Gene position: 4786710-4785697 (Counterclockwise)
Preceding gene: 91790359
Following gene: 91790356
Centisome position: 92.05
GC content: 65.09
Gene sequence:
>1014_bases ATGACGACACATCTCTCTCGCCGCAAGGCCGTTCTTGGTTTGGGTGGCCTGGGCCTGGGCGGTTTGCTCCCATTGCCGGC CACGGTGAGCGCCGCGGACCTCCCCACCCCGGGCTGGCCCTCAAAGCCCATCACCTATGTTGTTCCGTTCACGCCGGGTG GTTCCACCGACGTGATTGGCCGGACGCTGTCGCAGAAGCTGGCCGAAATACTGGGCCAGCCGGTGATCGTCGACAACAAG CCGGGGGCCGCCGGTGCCGTGGGCGCGACCTACGTGGCCAAGGCCAGGGCGGATGGCCACACGCTGCTGGGTGGCACCAT CAGCACGCACGCCATCAATGCCAGCCTCTACAAAAACCTGCCGTACGACCCCGTGAAGGACTTTGAGCCGGTGGCACTGG TCGCCATGCTGCCCAATGTGTTGATCGTCAACCCCAACCTGGGCATCAATTCGGTGGCGGACCTGGTGGCCTTGCTCAAG CGCGAACCGTCCCGGCGCAACTTCGCCTCCTCGGGCGCGGGCACTTCGACCCATCTGGCCGGCGAGATGTTTGCCGACCT GATTGGCGTGCCGCTCACCCACATCGCCTACAAAGGCACACCGCCCGCCATGCTGGATGTCTCGTCCGGCCAGGTGACCT TCATGTTTGACCAGATGACGGCCGCCGTGTCGCTGGCCCAGGCCGGCCGGCTCAAGCTGCTCGCGGTGACCACCCCCAAA CGCATGGCGCTGGCACCCAGCCTGCCCACCATGATGGAAGCGGGCATCAAGAACTTCCAGATGGCCTCGTGGCAGGCGGT GTATGCGCCCAAGGGAACACCGCAGCCCATCGTGCAGCGGCTCAATGTCGAGATTGTCAAAATCCTGAAGATGCCGGACG TGGCGGCCAAGCTGACCGACCAGCTCGGCATGGAGATCGTGGGCAGCTCGCCCGAAGAACTCGCGGCGCACATGAAGTCC GAGATCGCGCGCTGGGCCGAGCTCGTGAAGAAGTCCGGCGCGACAGCAAGCTGA
Upstream 100 bases:
>100_bases CCAGGTTCGTGTTTTATAATAAATTGTTAGCGCTAACATTCTGTTTTTCGGCGCATCTATCTTGTTGCCTGTATGCAACG CTCTTCATAAGGAAACCGTG
Downstream 100 bases:
>100_bases TACGGGAACCGCGCCGGGACTCGGTGCCATGCATGCAGCAGCGGCCCGATGCTGCCGCTGGGTTGCACCTGATCGGATGT CTGCTGACATTCAGTCGCGC
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTTHLSRRKAVLGLGGLGLGGLLPLPATVSAADLPTPGWPSKPITYVVPFTPGGSTDVIGRTLSQKLAEILGQPVIVDNK PGAAGAVGATYVAKARADGHTLLGGTISTHAINASLYKNLPYDPVKDFEPVALVAMLPNVLIVNPNLGINSVADLVALLK REPSRRNFASSGAGTSTHLAGEMFADLIGVPLTHIAYKGTPPAMLDVSSGQVTFMFDQMTAAVSLAQAGRLKLLAVTTPK RMALAPSLPTMMEAGIKNFQMASWQAVYAPKGTPQPIVQRLNVEIVKILKMPDVAAKLTDQLGMEIVGSSPEELAAHMKS EIARWAELVKKSGATAS
Sequences:
>Translated_337_residues MTTHLSRRKAVLGLGGLGLGGLLPLPATVSAADLPTPGWPSKPITYVVPFTPGGSTDVIGRTLSQKLAEILGQPVIVDNK PGAAGAVGATYVAKARADGHTLLGGTISTHAINASLYKNLPYDPVKDFEPVALVAMLPNVLIVNPNLGINSVADLVALLK REPSRRNFASSGAGTSTHLAGEMFADLIGVPLTHIAYKGTPPAMLDVSSGQVTFMFDQMTAAVSLAQAGRLKLLAVTTPK RMALAPSLPTMMEAGIKNFQMASWQAVYAPKGTPQPIVQRLNVEIVKILKMPDVAAKLTDQLGMEIVGSSPEELAAHMKS EIARWAELVKKSGATAS >Mature_336_residues TTHLSRRKAVLGLGGLGLGGLLPLPATVSAADLPTPGWPSKPITYVVPFTPGGSTDVIGRTLSQKLAEILGQPVIVDNKP GAAGAVGATYVAKARADGHTLLGGTISTHAINASLYKNLPYDPVKDFEPVALVAMLPNVLIVNPNLGINSVADLVALLKR EPSRRNFASSGAGTSTHLAGEMFADLIGVPLTHIAYKGTPPAMLDVSSGQVTFMFDQMTAAVSLAQAGRLKLLAVTTPKR MALAPSLPTMMEAGIKNFQMASWQAVYAPKGTPQPIVQRLNVEIVKILKMPDVAAKLTDQLGMEIVGSSPEELAAHMKSE IARWAELVKKSGATAS
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35224; Mature: 35092
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHLSRRKAVLGLGGLGLGGLLPLPATVSAADLPTPGWPSKPITYVVPFTPGGSTDVIG CCCCCCHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHH RTLSQKLAEILGQPVIVDNKPGAAGAVGATYVAKARADGHTLLGGTISTHAINASLYKNL HHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHEECHHHHHCC PYDPVKDFEPVALVAMLPNVLIVNPNLGINSVADLVALLKREPSRRNFASSGAGTSTHLA CCCCCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH GEMFADLIGVPLTHIAYKGTPPAMLDVSSGQVTFMFDQMTAAVSLAQAGRLKLLAVTTPK HHHHHHHHCCCHHHEEECCCCCCEEECCCCEEEEEEHHHHHHHHHHHCCCEEEEEECCCC RMALAPSLPTMMEAGIKNFQMASWQAVYAPKGTPQPIVQRLNVEIVKILKMPDVAAKLTD HHEECCCCHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHCHHHHHHHCCCHHHHHHHH QLGMEIVGSSPEELAAHMKSEIARWAELVKKSGATAS HHCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTHLSRRKAVLGLGGLGLGGLLPLPATVSAADLPTPGWPSKPITYVVPFTPGGSTDVIG CCCCCHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHH RTLSQKLAEILGQPVIVDNKPGAAGAVGATYVAKARADGHTLLGGTISTHAINASLYKNL HHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHEECHHHHHCC PYDPVKDFEPVALVAMLPNVLIVNPNLGINSVADLVALLKREPSRRNFASSGAGTSTHLA CCCCCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH GEMFADLIGVPLTHIAYKGTPPAMLDVSSGQVTFMFDQMTAAVSLAQAGRLKLLAVTTPK HHHHHHHHCCCHHHEEECCCCCCEEECCCCEEEEEEHHHHHHHHHHHCCCEEEEEECCCC RMALAPSLPTMMEAGIKNFQMASWQAVYAPKGTPQPIVQRLNVEIVKILKMPDVAAKLTD HHEECCCCHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHCHHHHHHHCCCHHHHHHHH QLGMEIVGSSPEELAAHMKSEIARWAELVKKSGATAS HHCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]