Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91790356
Identifier: 91790356
GI number: 91790356
Start: 4783598
End: 4784632
Strand: Reverse
Name: 91790356
Synonym: Bpro_4524
Alternate gene names: NA
Gene position: 4784632-4783598 (Counterclockwise)
Preceding gene: 91790358
Following gene: 91790355
Centisome position: 92.01
GC content: 65.51
Gene sequence:
>1035_bases ATGTCTAGCATCCTCAAGTGCATCCCCCATGCACTCATTCCAAGGAGACATCCCGTGAACACATTCAAGAAATTCGGCGC CCTGCTGGCAGGTCTGCTGCTGGCCACCGGCGGCGCCCTCGCCCAAACCTACCCGACCAAGCCGGTCAACCTGATGGTGC CCTACCCGGCGGGCGGGCCATCCGATGCGATCGCGCGTATCTTCACCGTGCCGCTGGGCAAGGAGCTGGGCCAGCAGGTG ATCGTGGAAAACCTGGGCGGCGTCGCCGGCGCGCTGGCCGCGCAGAAGGTGCTGGCGGCGCCCGCAGACGGCTACTACCT GTTCCAGGGGTCGCCGAACGAGGTGATTCTTTCGCCGCTGGCCAACGCGGCCGTCAAACTCAAGGCCGAAGACTTCCGCC TGGTGCATCCGGTGGCCGAGTCGGTGATGGTGTTCGTCGCGCGCAAGGACCTGCCGGCCAACAGCGTTGACGAATTGATC GCGCTGGCGCGCAAGTCGGGCGACAAGCCGCTGACCTACGGCAGCGTGGGTATAGGCTCGCTGTACCACCTGATCCTCGA GAACGTGCAGCAAGTCGCCGGCATCAAGCTCACGCATGCGCCGTACAAGGGCAATGCGCCGCTGCTGCAGGACATCGGCG GCGGCCAGGTCGACTTCGCCGTGCTGGTGTACAGCGCCGGCATGGGCGCGCTGGCCGAGCAGGGCCGGCTCAAGGTGATA GGCCAGCTGGGCGCGCAGCGGTCCGAGCTGCTGAAGAACGTGCCGGCCGCCAGCGAAGGCAAGGAGCTGAAGAACTTCTC GTACAAGATCTGGAGCGGCCTCATGGTGCCGAGGAACACGCCGGAAAGCGTGGTGCAGCGGCTGCACAAGGCCATCGGCG AGACGCTGAAAGATACCTCTGTGCGCACGCAACTGGAGGCGCAGGCGGCCCAGGTATCGCCGCCCCTGTCGCTGGCCGAA TCGGCGAAGTTCTTCGAGGCCGAGACCGCGCGCTACCGCAGTATCGCCAAATCGATCAATCTGCAGCCGCAGTGA
Upstream 100 bases:
>100_bases AGCAGGTGTTCGAGGTGTTGGAGGTTCATGGTGCAGGCGAATTGAATGAGTAATACGAATACTAATCACAAAAATAATGC ATTGGACACATTAGTTCGGG
Downstream 100 bases:
>100_bases GGCACGCCCATGAGCCCCTTGCTTGAAGAACTGCACGCGCAGGCCGATGAGTTCATCGGCCTGCGGCGCGACATCCACCG CCACCCCGAACTGGCCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSSILKCIPHALIPRRHPVNTFKKFGALLAGLLLATGGALAQTYPTKPVNLMVPYPAGGPSDAIARIFTVPLGKELGQQV IVENLGGVAGALAAQKVLAAPADGYYLFQGSPNEVILSPLANAAVKLKAEDFRLVHPVAESVMVFVARKDLPANSVDELI ALARKSGDKPLTYGSVGIGSLYHLILENVQQVAGIKLTHAPYKGNAPLLQDIGGGQVDFAVLVYSAGMGALAEQGRLKVI GQLGAQRSELLKNVPAASEGKELKNFSYKIWSGLMVPRNTPESVVQRLHKAIGETLKDTSVRTQLEAQAAQVSPPLSLAE SAKFFEAETARYRSIAKSINLQPQ
Sequences:
>Translated_344_residues MSSILKCIPHALIPRRHPVNTFKKFGALLAGLLLATGGALAQTYPTKPVNLMVPYPAGGPSDAIARIFTVPLGKELGQQV IVENLGGVAGALAAQKVLAAPADGYYLFQGSPNEVILSPLANAAVKLKAEDFRLVHPVAESVMVFVARKDLPANSVDELI ALARKSGDKPLTYGSVGIGSLYHLILENVQQVAGIKLTHAPYKGNAPLLQDIGGGQVDFAVLVYSAGMGALAEQGRLKVI GQLGAQRSELLKNVPAASEGKELKNFSYKIWSGLMVPRNTPESVVQRLHKAIGETLKDTSVRTQLEAQAAQVSPPLSLAE SAKFFEAETARYRSIAKSINLQPQ >Mature_343_residues SSILKCIPHALIPRRHPVNTFKKFGALLAGLLLATGGALAQTYPTKPVNLMVPYPAGGPSDAIARIFTVPLGKELGQQVI VENLGGVAGALAAQKVLAAPADGYYLFQGSPNEVILSPLANAAVKLKAEDFRLVHPVAESVMVFVARKDLPANSVDELIA LARKSGDKPLTYGSVGIGSLYHLILENVQQVAGIKLTHAPYKGNAPLLQDIGGGQVDFAVLVYSAGMGALAEQGRLKVIG QLGAQRSELLKNVPAASEGKELKNFSYKIWSGLMVPRNTPESVVQRLHKAIGETLKDTSVRTQLEAQAAQVSPPLSLAES AKFFEAETARYRSIAKSINLQPQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 36513; Mature: 36382
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSILKCIPHALIPRRHPVNTFKKFGALLAGLLLATGGALAQTYPTKPVNLMVPYPAGGP CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEECCCCCC SDAIARIFTVPLGKELGQQVIVENLGGVAGALAAQKVLAAPADGYYLFQGSPNEVILSPL HHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCC ANAAVKLKAEDFRLVHPVAESVMVFVARKDLPANSVDELIALARKSGDKPLTYGSVGIGS CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEECCCHHHH LYHLILENVQQVAGIKLTHAPYKGNAPLLQDIGGGQVDFAVLVYSAGMGALAEQGRLKVI HHHHHHHHHHHHHCEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHCCCHHHHHCCCHHHH GQLGAQRSELLKNVPAASEGKELKNFSYKIWSGLMVPRNTPESVVQRLHKAIGETLKDTS HHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VRTQLEAQAAQVSPPLSLAESAKFFEAETARYRSIAKSINLQPQ HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SSILKCIPHALIPRRHPVNTFKKFGALLAGLLLATGGALAQTYPTKPVNLMVPYPAGGP CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEECCCCCC SDAIARIFTVPLGKELGQQVIVENLGGVAGALAAQKVLAAPADGYYLFQGSPNEVILSPL HHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCC ANAAVKLKAEDFRLVHPVAESVMVFVARKDLPANSVDELIALARKSGDKPLTYGSVGIGS CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEECCCHHHH LYHLILENVQQVAGIKLTHAPYKGNAPLLQDIGGGQVDFAVLVYSAGMGALAEQGRLKVI HHHHHHHHHHHHHCEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHCCCHHHHHCCCHHHH GQLGAQRSELLKNVPAASEGKELKNFSYKIWSGLMVPRNTPESVVQRLHKAIGETLKDTS HHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VRTQLEAQAAQVSPPLSLAESAKFFEAETARYRSIAKSINLQPQ HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]