Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91790315
Identifier: 91790315
GI number: 91790315
Start: 4737316
End: 4737726
Strand: Reverse
Name: 91790315
Synonym: Bpro_4483
Alternate gene names: NA
Gene position: 4737726-4737316 (Counterclockwise)
Preceding gene: 91790316
Following gene: 91790314
Centisome position: 91.11
GC content: 63.75
Gene sequence:
>411_bases ATGAGCACTCAATCCATCGTCCTGGACACCAACATCGTGCTCGATGTGTTTGTCTTCAACGACGCGGCGGCGCTTCCGGT CAGGCAGGCGCTGGAAGCCGGCGAGCTCGACTGGCTGGCCACCCAGCCCATGCGCGATGAACTGGCGCGTGTGCTGGCCT ACCCGCAAATCGTGCCGCGCCTGGCGTTTTACCAATTGAGCGCCGACGACGTGCTGGCCGCATTTGACCGGCATGCGCGC CTGCGGGAGGTGCCTGGCAAGGCCAGCGTGACCTGCAGCGACGCGGACGACCAGAAATTCATCGACCTCGCGGTGGCCAG CGAAGCCCTGCTGCTGAGCAAGGACCGGGCTGTCATTTCCATGGCAAAAAGGCTTCTGGCCCATGGTGTACGGGCGCAGG CAGCTATCTGA
Upstream 100 bases:
>100_bases AAGCCCGCGTCCGGTTCTACTCCCTCTCCCGCCGGGAGAGGGCCGGGGTGAGGGTGGTGCATCACAGGCTTGCCTCCAAG CGCCCCATGGCCTTCAGCGC
Downstream 100 bases:
>100_bases TGCAGAGCGAATCGGCGTAAATTCTGGATTTGTCGCTTTTCGGCTGATTTGACGAATTTGAGTGATTTGAGGCTGACCCA TTTCCGTCTCCATCCCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: PilT Protein Domain Protein
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSTQSIVLDTNIVLDVFVFNDAAALPVRQALEAGELDWLATQPMRDELARVLAYPQIVPRLAFYQLSADDVLAAFDRHAR LREVPGKASVTCSDADDQKFIDLAVASEALLLSKDRAVISMAKRLLAHGVRAQAAI
Sequences:
>Translated_136_residues MSTQSIVLDTNIVLDVFVFNDAAALPVRQALEAGELDWLATQPMRDELARVLAYPQIVPRLAFYQLSADDVLAAFDRHAR LREVPGKASVTCSDADDQKFIDLAVASEALLLSKDRAVISMAKRLLAHGVRAQAAI >Mature_135_residues STQSIVLDTNIVLDVFVFNDAAALPVRQALEAGELDWLATQPMRDELARVLAYPQIVPRLAFYQLSADDVLAAFDRHARL REVPGKASVTCSDADDQKFIDLAVASEALLLSKDRAVISMAKRLLAHGVRAQAAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14847; Mature: 14716
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQSIVLDTNIVLDVFVFNDAAALPVRQALEAGELDWLATQPMRDELARVLAYPQIVPR CCCCEEEEECCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH LAFYQLSADDVLAAFDRHARLREVPGKASVTCSDADDQKFIDLAVASEALLLSKDRAVIS HHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHH MAKRLLAHGVRAQAAI HHHHHHHCCCHHHCCC >Mature Secondary Structure STQSIVLDTNIVLDVFVFNDAAALPVRQALEAGELDWLATQPMRDELARVLAYPQIVPR CCCEEEEECCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH LAFYQLSADDVLAAFDRHARLREVPGKASVTCSDADDQKFIDLAVASEALLLSKDRAVIS HHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHH MAKRLLAHGVRAQAAI HHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA