Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91790314

Identifier: 91790314

GI number: 91790314

Start: 4736267

End: 4737091

Strand: Reverse

Name: 91790314

Synonym: Bpro_4482

Alternate gene names: NA

Gene position: 4737091-4736267 (Counterclockwise)

Preceding gene: 91790315

Following gene: 91790305

Centisome position: 91.09

GC content: 64.61

Gene sequence:

>825_bases
ATGAAAACCTCCTCCACACCCCCCGCCTCCACAACGCCCGCCACGCCCTGGCTGGAAGCCGAGGCGTTTGACGAACTCGA
CACCATCCTGGACGACCTGCGCACCCGCTATGACGAAACGCCGCAGTGGGAGTTTTGTGAAGGCTTCATGGCCGCGGTGA
TTTGTTCGCGCCGCCCGATTGCTGCCGATGAATACCTGCCGGTGTTGCTGGCCACGCCGGCCGAGGGCGAAGCGCCCGAC
GCCGAAGGCGGCTCATTTGCCAGCGAGGCGCAGCGCGAGCGCTTTCTCACACTCTGGAACCAGCGCTGGAACGAAGTGGC
CACGGCGCTCGACACCGAAGTGGACTCGCTGGAAGACGACAACTGCTACCACCCTGAAGTGATGGACGTTCGGGGTGCCG
TGGCCGACATGCCGCCCGAGGAGCGAGCCGCCTTCAAGGGCGAAGAGCTGCCCGCCTTTGCCCAGGTCTGGGCGCTGGGT
TTCATGTTTGCCGTGGAAAGCTGGCCCGAGGAATGGGCCGCGCCGCGCGACAAGGACGCCGCCAAATGGCTGGACGGCGC
CCTGCAGGCCGTGGTGGCCATGACCGAAGATGACGAGGCCGCGCCCGAAGTGTCACCCCTGAGCGAAGACGGTGCGCACA
GCACCAGCATTGCCCGACTCAATGCGTTTGGCGAGGCGATCTGGGCGGTGTATGACCTGCGTGAACTGTGGAAGACCTTG
GGCCCCAAGGTGGAGACGGTGCGCAAGGAAGTCACGCCTGGCCGCAATGATCTTTGCTATTGCGGCAGTGGCAAGAAGTA
CAAGAAGTGCCATGGGGCGGGGTGA

Upstream 100 bases:

>100_bases
TTTGCCGCGCCGCAGCGCGGCTAGGAAACTCAAGCCAGGCAAGACGCGGCAGATACACTTTGCCTTATAAGAGCCCTCCA
TCCAGCGCAAGACTTTTTTC

Downstream 100 bases:

>100_bases
TGGGAAGGGGTCGCCTGAAGATCCGGTCTGAGTGCTTCTGATTTTGCAGCGACTGGGGACCGCTGTTAAAGGGCGGAAGC
GCCTCGTTGGGCCGCACGCC

Product: SecC motif-containing protein

Products: NA

Alternate protein names: SEC-C Motif Domain Protein; Preprotein Translocase SecA Subunit; Sec-C Motif Domain Protein; YecA Family Protein

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKTSSTPPASTTPATPWLEAEAFDELDTILDDLRTRYDETPQWEFCEGFMAAVICSRRPIAADEYLPVLLATPAEGEAPD
AEGGSFASEAQRERFLTLWNQRWNEVATALDTEVDSLEDDNCYHPEVMDVRGAVADMPPEERAAFKGEELPAFAQVWALG
FMFAVESWPEEWAAPRDKDAAKWLDGALQAVVAMTEDDEAAPEVSPLSEDGAHSTSIARLNAFGEAIWAVYDLRELWKTL
GPKVETVRKEVTPGRNDLCYCGSGKKYKKCHGAG

Sequences:

>Translated_274_residues
MKTSSTPPASTTPATPWLEAEAFDELDTILDDLRTRYDETPQWEFCEGFMAAVICSRRPIAADEYLPVLLATPAEGEAPD
AEGGSFASEAQRERFLTLWNQRWNEVATALDTEVDSLEDDNCYHPEVMDVRGAVADMPPEERAAFKGEELPAFAQVWALG
FMFAVESWPEEWAAPRDKDAAKWLDGALQAVVAMTEDDEAAPEVSPLSEDGAHSTSIARLNAFGEAIWAVYDLRELWKTL
GPKVETVRKEVTPGRNDLCYCGSGKKYKKCHGAG
>Mature_274_residues
MKTSSTPPASTTPATPWLEAEAFDELDTILDDLRTRYDETPQWEFCEGFMAAVICSRRPIAADEYLPVLLATPAEGEAPD
AEGGSFASEAQRERFLTLWNQRWNEVATALDTEVDSLEDDNCYHPEVMDVRGAVADMPPEERAAFKGEELPAFAQVWALG
FMFAVESWPEEWAAPRDKDAAKWLDGALQAVVAMTEDDEAAPEVSPLSEDGAHSTSIARLNAFGEAIWAVYDLRELWKTL
GPKVETVRKEVTPGRNDLCYCGSGKKYKKCHGAG

Specific function: Unknown

COG id: COG3318

COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30285; Mature: 30285

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSSTPPASTTPATPWLEAEAFDELDTILDDLRTRYDETPQWEFCEGFMAAVICSRRPI
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
AADEYLPVLLATPAEGEAPDAEGGSFASEAQRERFLTLWNQRWNEVATALDTEVDSLEDD
CCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NCYHPEVMDVRGAVADMPPEERAAFKGEELPAFAQVWALGFMFAVESWPEEWAAPRDKDA
CCCCCHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCHH
AKWLDGALQAVVAMTEDDEAAPEVSPLSEDGAHSTSIARLNAFGEAIWAVYDLRELWKTL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GPKVETVRKEVTPGRNDLCYCGSGKKYKKCHGAG
CCHHHHHHHHCCCCCCCEEEECCCCCHHHHCCCC
>Mature Secondary Structure
MKTSSTPPASTTPATPWLEAEAFDELDTILDDLRTRYDETPQWEFCEGFMAAVICSRRPI
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
AADEYLPVLLATPAEGEAPDAEGGSFASEAQRERFLTLWNQRWNEVATALDTEVDSLEDD
CCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NCYHPEVMDVRGAVADMPPEERAAFKGEELPAFAQVWALGFMFAVESWPEEWAAPRDKDA
CCCCCHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCHH
AKWLDGALQAVVAMTEDDEAAPEVSPLSEDGAHSTSIARLNAFGEAIWAVYDLRELWKTL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GPKVETVRKEVTPGRNDLCYCGSGKKYKKCHGAG
CCHHHHHHHHCCCCCCCEEEECCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA