Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91790314
Identifier: 91790314
GI number: 91790314
Start: 4736267
End: 4737091
Strand: Reverse
Name: 91790314
Synonym: Bpro_4482
Alternate gene names: NA
Gene position: 4737091-4736267 (Counterclockwise)
Preceding gene: 91790315
Following gene: 91790305
Centisome position: 91.09
GC content: 64.61
Gene sequence:
>825_bases ATGAAAACCTCCTCCACACCCCCCGCCTCCACAACGCCCGCCACGCCCTGGCTGGAAGCCGAGGCGTTTGACGAACTCGA CACCATCCTGGACGACCTGCGCACCCGCTATGACGAAACGCCGCAGTGGGAGTTTTGTGAAGGCTTCATGGCCGCGGTGA TTTGTTCGCGCCGCCCGATTGCTGCCGATGAATACCTGCCGGTGTTGCTGGCCACGCCGGCCGAGGGCGAAGCGCCCGAC GCCGAAGGCGGCTCATTTGCCAGCGAGGCGCAGCGCGAGCGCTTTCTCACACTCTGGAACCAGCGCTGGAACGAAGTGGC CACGGCGCTCGACACCGAAGTGGACTCGCTGGAAGACGACAACTGCTACCACCCTGAAGTGATGGACGTTCGGGGTGCCG TGGCCGACATGCCGCCCGAGGAGCGAGCCGCCTTCAAGGGCGAAGAGCTGCCCGCCTTTGCCCAGGTCTGGGCGCTGGGT TTCATGTTTGCCGTGGAAAGCTGGCCCGAGGAATGGGCCGCGCCGCGCGACAAGGACGCCGCCAAATGGCTGGACGGCGC CCTGCAGGCCGTGGTGGCCATGACCGAAGATGACGAGGCCGCGCCCGAAGTGTCACCCCTGAGCGAAGACGGTGCGCACA GCACCAGCATTGCCCGACTCAATGCGTTTGGCGAGGCGATCTGGGCGGTGTATGACCTGCGTGAACTGTGGAAGACCTTG GGCCCCAAGGTGGAGACGGTGCGCAAGGAAGTCACGCCTGGCCGCAATGATCTTTGCTATTGCGGCAGTGGCAAGAAGTA CAAGAAGTGCCATGGGGCGGGGTGA
Upstream 100 bases:
>100_bases TTTGCCGCGCCGCAGCGCGGCTAGGAAACTCAAGCCAGGCAAGACGCGGCAGATACACTTTGCCTTATAAGAGCCCTCCA TCCAGCGCAAGACTTTTTTC
Downstream 100 bases:
>100_bases TGGGAAGGGGTCGCCTGAAGATCCGGTCTGAGTGCTTCTGATTTTGCAGCGACTGGGGACCGCTGTTAAAGGGCGGAAGC GCCTCGTTGGGCCGCACGCC
Product: SecC motif-containing protein
Products: NA
Alternate protein names: SEC-C Motif Domain Protein; Preprotein Translocase SecA Subunit; Sec-C Motif Domain Protein; YecA Family Protein
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKTSSTPPASTTPATPWLEAEAFDELDTILDDLRTRYDETPQWEFCEGFMAAVICSRRPIAADEYLPVLLATPAEGEAPD AEGGSFASEAQRERFLTLWNQRWNEVATALDTEVDSLEDDNCYHPEVMDVRGAVADMPPEERAAFKGEELPAFAQVWALG FMFAVESWPEEWAAPRDKDAAKWLDGALQAVVAMTEDDEAAPEVSPLSEDGAHSTSIARLNAFGEAIWAVYDLRELWKTL GPKVETVRKEVTPGRNDLCYCGSGKKYKKCHGAG
Sequences:
>Translated_274_residues MKTSSTPPASTTPATPWLEAEAFDELDTILDDLRTRYDETPQWEFCEGFMAAVICSRRPIAADEYLPVLLATPAEGEAPD AEGGSFASEAQRERFLTLWNQRWNEVATALDTEVDSLEDDNCYHPEVMDVRGAVADMPPEERAAFKGEELPAFAQVWALG FMFAVESWPEEWAAPRDKDAAKWLDGALQAVVAMTEDDEAAPEVSPLSEDGAHSTSIARLNAFGEAIWAVYDLRELWKTL GPKVETVRKEVTPGRNDLCYCGSGKKYKKCHGAG >Mature_274_residues MKTSSTPPASTTPATPWLEAEAFDELDTILDDLRTRYDETPQWEFCEGFMAAVICSRRPIAADEYLPVLLATPAEGEAPD AEGGSFASEAQRERFLTLWNQRWNEVATALDTEVDSLEDDNCYHPEVMDVRGAVADMPPEERAAFKGEELPAFAQVWALG FMFAVESWPEEWAAPRDKDAAKWLDGALQAVVAMTEDDEAAPEVSPLSEDGAHSTSIARLNAFGEAIWAVYDLRELWKTL GPKVETVRKEVTPGRNDLCYCGSGKKYKKCHGAG
Specific function: Unknown
COG id: COG3318
COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30285; Mature: 30285
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSSTPPASTTPATPWLEAEAFDELDTILDDLRTRYDETPQWEFCEGFMAAVICSRRPI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC AADEYLPVLLATPAEGEAPDAEGGSFASEAQRERFLTLWNQRWNEVATALDTEVDSLEDD CCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NCYHPEVMDVRGAVADMPPEERAAFKGEELPAFAQVWALGFMFAVESWPEEWAAPRDKDA CCCCCHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCHH AKWLDGALQAVVAMTEDDEAAPEVSPLSEDGAHSTSIARLNAFGEAIWAVYDLRELWKTL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GPKVETVRKEVTPGRNDLCYCGSGKKYKKCHGAG CCHHHHHHHHCCCCCCCEEEECCCCCHHHHCCCC >Mature Secondary Structure MKTSSTPPASTTPATPWLEAEAFDELDTILDDLRTRYDETPQWEFCEGFMAAVICSRRPI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC AADEYLPVLLATPAEGEAPDAEGGSFASEAQRERFLTLWNQRWNEVATALDTEVDSLEDD CCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NCYHPEVMDVRGAVADMPPEERAAFKGEELPAFAQVWALGFMFAVESWPEEWAAPRDKDA CCCCCHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCHH AKWLDGALQAVVAMTEDDEAAPEVSPLSEDGAHSTSIARLNAFGEAIWAVYDLRELWKTL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GPKVETVRKEVTPGRNDLCYCGSGKKYKKCHGAG CCHHHHHHHHCCCCCCCEEEECCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA