Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is argE [H]
Identifier: 91789266
GI number: 91789266
Start: 3607281
End: 3608501
Strand: Direct
Name: argE [H]
Synonym: Bpro_3411
Alternate gene names: 91789266
Gene position: 3607281-3608501 (Clockwise)
Preceding gene: 91789264
Following gene: 91789267
Centisome position: 69.37
GC content: 64.21
Gene sequence:
>1221_bases ATGAACGCCCCCCTTCCCGGCAGTGCCATGCAATCCGTCCTGGCTGCCGACCTGGCCGCCCTGCCCCTGATTGAAAAATG GGTTTCGTTTGCCTCGGTGTCGCGCGATACCAACCTGCCCATCATCGAATGGACACGCGAGCGGCTCGAGGCACTTGGCA TCGAATGCCGCCTGACGTACGACGACAGCGGCAAGAAGGCCAACCTGTGGGCTACGCTGCCGGCGGAAAACGGTGAAACA AAAACAGGCGGGCTGGTGCTGTCGGGCCACACCGATGTGGTGCCTGTCGATGGCCAGCCCTGGGACACCGATCCGTTTGC GGCAACGATCATTGGCGACAGGCTCTATGGCCGCGGCGTCACCGACATGAAGAGCTACGGCGCCACCGCGCTGATGATGG TGCCCGAATTGCTCAAGCGCAAGCTCAAGACCCCCGTACACCTGGCCTTCAGCTACGACGAGGAAGTCGGCTGCATCGGC GTGCGCCGCCTGATCGCCGACATGGTGGCCCAGGGCTACAAGCCCGCCGGCTGCATCGTCGGCGAGCCCACCGGCATGCA GGTGGTGATTGCGCACAAGGGCAAGCATGCCTACAAGACCTCGGTGCGCGGCTTCGAGGCGCACTCCTCGCTCACGCCGC TGGGCGTCAATGCGGTCGAGATCGCCTGCGAATTCGTCGCCCACCTCAAGTCCATGCACCGCAGGCTGGTCGCCCAGGGG CCGTTCGATGCGATTTACGACGTGCCGCACACCACCATCCATACCGGCGTGATTGCCGGCGGCACCGCGCTCAACATCAT TCCGCGCGACTGCGATGTGACCTGGGAGATTCGTCACCACCACATGAACTCGCCGGAGGCGCTCTTCAATGAAGCCAAGG CGTTTGCCGACAGCCTGCTGCCAGCCATGCAGGCCGTGGCGCCCGACACCGGCATCACCCACAAGCTCAACTCGGTGCTG CCCGGTTTCGCCACCGATGCGGACAGCGAGATTGCGCAGCTGTGCTTCAGATGCGCGGGCGTGGACAGCAGCATCGGCGC CGGCAAGGTGTCGTTTGGCACGGAAGCTGCATTGTTTCATCAGGCCGGTGTGCCCACCATCGTGTGCGGCCCCGGCCACA TCGCGCAGGCGCACCAACCCAATGAATGGGTCACGCTGGAGCAGCTGGCCTGGTGCGAGCGCTTCATGCGCCGCCTGGCT GACGAAATTTGCGTGAACTGA
Upstream 100 bases:
>100_bases CACAAGCTCCCGCGGAAAAAGATAAGATGTCTCACCATTTTGACGGTCCACGCTCCCTTTCCGCCAGTCCCGCCCAGGGA CTTTTCACAAAGGCTCTCTC
Downstream 100 bases:
>100_bases CTCCAGCAACCAACCAGAAAGACCACCCGATGGACCGCAGAGAACTCATGGCCGCAGGCCTGGCACTTGTCGCAGGCAGC GCACTGGCGCAGGCCAATCC
Product: acetylornithine deacetylase
Products: NA
Alternate protein names: AO; Acetylornithinase; N-acetylornithinase; NAO [H]
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MNAPLPGSAMQSVLAADLAALPLIEKWVSFASVSRDTNLPIIEWTRERLEALGIECRLTYDDSGKKANLWATLPAENGET KTGGLVLSGHTDVVPVDGQPWDTDPFAATIIGDRLYGRGVTDMKSYGATALMMVPELLKRKLKTPVHLAFSYDEEVGCIG VRRLIADMVAQGYKPAGCIVGEPTGMQVVIAHKGKHAYKTSVRGFEAHSSLTPLGVNAVEIACEFVAHLKSMHRRLVAQG PFDAIYDVPHTTIHTGVIAGGTALNIIPRDCDVTWEIRHHHMNSPEALFNEAKAFADSLLPAMQAVAPDTGITHKLNSVL PGFATDADSEIAQLCFRCAGVDSSIGAGKVSFGTEAALFHQAGVPTIVCGPGHIAQAHQPNEWVTLEQLAWCERFMRRLA DEICVN
Sequences:
>Translated_406_residues MNAPLPGSAMQSVLAADLAALPLIEKWVSFASVSRDTNLPIIEWTRERLEALGIECRLTYDDSGKKANLWATLPAENGET KTGGLVLSGHTDVVPVDGQPWDTDPFAATIIGDRLYGRGVTDMKSYGATALMMVPELLKRKLKTPVHLAFSYDEEVGCIG VRRLIADMVAQGYKPAGCIVGEPTGMQVVIAHKGKHAYKTSVRGFEAHSSLTPLGVNAVEIACEFVAHLKSMHRRLVAQG PFDAIYDVPHTTIHTGVIAGGTALNIIPRDCDVTWEIRHHHMNSPEALFNEAKAFADSLLPAMQAVAPDTGITHKLNSVL PGFATDADSEIAQLCFRCAGVDSSIGAGKVSFGTEAALFHQAGVPTIVCGPGHIAQAHQPNEWVTLEQLAWCERFMRRLA DEICVN >Mature_406_residues MNAPLPGSAMQSVLAADLAALPLIEKWVSFASVSRDTNLPIIEWTRERLEALGIECRLTYDDSGKKANLWATLPAENGET KTGGLVLSGHTDVVPVDGQPWDTDPFAATIIGDRLYGRGVTDMKSYGATALMMVPELLKRKLKTPVHLAFSYDEEVGCIG VRRLIADMVAQGYKPAGCIVGEPTGMQVVIAHKGKHAYKTSVRGFEAHSSLTPLGVNAVEIACEFVAHLKSMHRRLVAQG PFDAIYDVPHTTIHTGVIAGGTALNIIPRDCDVTWEIRHHHMNSPEALFNEAKAFADSLLPAMQAVAPDTGITHKLNSVL PGFATDADSEIAQLCFRCAGVDSSIGAGKVSFGTEAALFHQAGVPTIVCGPGHIAQAHQPNEWVTLEQLAWCERFMRRLA DEICVN
Specific function: Displays A Broad Specificity And Can Also Deacylate Substrates Such As Acetylarginine, Acetylhistidine Or Acetylglutamate Semialdehyde. [C]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family. ArgE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790395, Length=322, Percent_Identity=31.6770186335404, Blast_Score=154, Evalue=9e-39, Organism=Escherichia coli, GI1788816, Length=243, Percent_Identity=29.6296296296296, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010169 - InterPro: IPR001261 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.16 [H]
Molecular weight: Translated: 43766; Mature: 43766
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPLPGSAMQSVLAADLAALPLIEKWVSFASVSRDTNLPIIEWTRERLEALGIECRLTY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEE DDSGKKANLWATLPAENGETKTGGLVLSGHTDVVPVDGQPWDTDPFAATIIGDRLYGRGV CCCCCEEEEEEEECCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCEEEEECCHHHCCCC TDMKSYGATALMMVPELLKRKLKTPVHLAFSYDEEVGCIGVRRLIADMVAQGYKPAGCIV HHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEE GEPTGMQVVIAHKGKHAYKTSVRGFEAHSSLTPLGVNAVEIACEFVAHLKSMHRRLVAQG ECCCCCEEEEEECCCCHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PFDAIYDVPHTTIHTGVIAGGTALNIIPRDCDVTWEIRHHHMNSPEALFNEAKAFADSLL CCHHHHCCCCCHHHHCEEECCCEEEEEECCCCEEEEEHHCCCCCHHHHHHHHHHHHHHHH PAMQAVAPDTGITHKLNSVLPGFATDADSEIAQLCFRCAGVDSSIGAGKVSFGTEAALFH HHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH QAGVPTIVCGPGHIAQAHQPNEWVTLEQLAWCERFMRRLADEICVN HCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNAPLPGSAMQSVLAADLAALPLIEKWVSFASVSRDTNLPIIEWTRERLEALGIECRLTY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEE DDSGKKANLWATLPAENGETKTGGLVLSGHTDVVPVDGQPWDTDPFAATIIGDRLYGRGV CCCCCEEEEEEEECCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCEEEEECCHHHCCCC TDMKSYGATALMMVPELLKRKLKTPVHLAFSYDEEVGCIGVRRLIADMVAQGYKPAGCIV HHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEE GEPTGMQVVIAHKGKHAYKTSVRGFEAHSSLTPLGVNAVEIACEFVAHLKSMHRRLVAQG ECCCCCEEEEEECCCCHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PFDAIYDVPHTTIHTGVIAGGTALNIIPRDCDVTWEIRHHHMNSPEALFNEAKAFADSLL CCHHHHCCCCCHHHHCEEECCCEEEEEECCCCEEEEEHHCCCCCHHHHHHHHHHHHHHHH PAMQAVAPDTGITHKLNSVLPGFATDADSEIAQLCFRCAGVDSSIGAGKVSFGTEAALFH HHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH QAGVPTIVCGPGHIAQAHQPNEWVTLEQLAWCERFMRRLADEICVN HCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10692366 [H]