Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789264

Identifier: 91789264

GI number: 91789264

Start: 3605905

End: 3606525

Strand: Direct

Name: 91789264

Synonym: Bpro_3409

Alternate gene names: NA

Gene position: 3605905-3606525 (Clockwise)

Preceding gene: 91789263

Following gene: 91789266

Centisome position: 69.34

GC content: 62.16

Gene sequence:

>621_bases
ATGAATTTCCACAGTCTGTTTGGCCTGAAAAGCCGTCCGAAACCGCTGCCGGCCAAGGCCAAGACCATCGCCGCCGAAGG
CCCGCCCACCATCGAAGACGGATCAGCCAACGCCTTGCGGCGCCAGCTGGTCCAGGTATTGCTGCGCGATGTCGTGCGAC
GCCACGGCATTCCACCCGGCTGGCTGGACTGCCAGATGCTGGTCGTCTCCAGCCGCAGTCGCGGCGAGGGCATGTATGTG
CGCCTGGTCATGAGACACTGGGATCCACGCTTGCTGAACTATGCAGTCGCTTTCCAGAAAGCGCTCATGGTTGACATCAT
GCGTTTTGAGCCGCGCGCCACAGACTGGCTGTACGGAATCTCGTGGCAGCTGGAAGTCGGCGACACCTGCCCTTACAAGG
AACTGCCTAACCGCTCGGTGTGGCAAGAGCCGGCCCAAAAACCGTCCCACCAGCCGCCCCAAAAGCCGGCCCACGAGCCC
ACCCCCCAGGACGAGCTGAAAACCGATCTGGAACGCATTTTTGCGATACGCGACTCCGACATGCTGATGCGCGGAGAAGA
AGCCGGCCGCCCAGCCCGGGCCTACGCAAAAACGGAGCCCCAAAAGCTGGTGAACCCCTGA

Upstream 100 bases:

>100_bases
CATCACTAACACCTTGTAACGCCCGACAAGCCATTTTGCAGACGGGCGAGCCAACTTATTAGGCATTAAGTTGACCATCA
ACGGAATGGGAGCGTACGCC

Downstream 100 bases:

>100_bases
GGAGAGCCCGGCTCCGCGCCCGGCCCCGGCGGCTTTCTGCTTTCTTGTTAATACGTGCCGATGTAGTCTTTCTTGCCGAC
TTCCACACCGCTGTGGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MNFHSLFGLKSRPKPLPAKAKTIAAEGPPTIEDGSANALRRQLVQVLLRDVVRRHGIPPGWLDCQMLVVSSRSRGEGMYV
RLVMRHWDPRLLNYAVAFQKALMVDIMRFEPRATDWLYGISWQLEVGDTCPYKELPNRSVWQEPAQKPSHQPPQKPAHEP
TPQDELKTDLERIFAIRDSDMLMRGEEAGRPARAYAKTEPQKLVNP

Sequences:

>Translated_206_residues
MNFHSLFGLKSRPKPLPAKAKTIAAEGPPTIEDGSANALRRQLVQVLLRDVVRRHGIPPGWLDCQMLVVSSRSRGEGMYV
RLVMRHWDPRLLNYAVAFQKALMVDIMRFEPRATDWLYGISWQLEVGDTCPYKELPNRSVWQEPAQKPSHQPPQKPAHEP
TPQDELKTDLERIFAIRDSDMLMRGEEAGRPARAYAKTEPQKLVNP
>Mature_206_residues
MNFHSLFGLKSRPKPLPAKAKTIAAEGPPTIEDGSANALRRQLVQVLLRDVVRRHGIPPGWLDCQMLVVSSRSRGEGMYV
RLVMRHWDPRLLNYAVAFQKALMVDIMRFEPRATDWLYGISWQLEVGDTCPYKELPNRSVWQEPAQKPSHQPPQKPAHEP
TPQDELKTDLERIFAIRDSDMLMRGEEAGRPARAYAKTEPQKLVNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23542; Mature: 23542

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFHSLFGLKSRPKPLPAKAKTIAAEGPPTIEDGSANALRRQLVQVLLRDVVRRHGIPPG
CCCHHHCCCCCCCCCCCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
WLDCQMLVVSSRSRGEGMYVRLVMRHWDPRLLNYAVAFQKALMVDIMRFEPRATDWLYGI
CHHHEEEEEECCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
SWQLEVGDTCPYKELPNRSVWQEPAQKPSHQPPQKPAHEPTPQDELKTDLERIFAIRDSD
EEEEECCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
MLMRGEEAGRPARAYAKTEPQKLVNP
CEECCHHCCCCHHHHHCCCCHHCCCC
>Mature Secondary Structure
MNFHSLFGLKSRPKPLPAKAKTIAAEGPPTIEDGSANALRRQLVQVLLRDVVRRHGIPPG
CCCHHHCCCCCCCCCCCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
WLDCQMLVVSSRSRGEGMYVRLVMRHWDPRLLNYAVAFQKALMVDIMRFEPRATDWLYGI
CHHHEEEEEECCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
SWQLEVGDTCPYKELPNRSVWQEPAQKPSHQPPQKPAHEPTPQDELKTDLERIFAIRDSD
EEEEECCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
MLMRGEEAGRPARAYAKTEPQKLVNP
CEECCHHCCCCHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA