Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789267

Identifier: 91789267

GI number: 91789267

Start: 3608531

End: 3609487

Strand: Direct

Name: 91789267

Synonym: Bpro_3412

Alternate gene names: NA

Gene position: 3608531-3609487 (Clockwise)

Preceding gene: 91789266

Following gene: 91789269

Centisome position: 69.39

GC content: 64.68

Gene sequence:

>957_bases
ATGGACCGCAGAGAACTCATGGCCGCAGGCCTGGCACTTGTCGCAGGCAGCGCACTGGCGCAGGCCAATCCCAAACTGGC
ACGCATTGTGGTGCCCTTCGCCCCAGGCGGCGTGCAGGACATCCTGGCCCGATCACTGTCTACCGAACTGGGCGTCGCGC
TGGGCCAGACCGTCATCGTGGAAAACCGCCCTGGCGCCGGCGGCACGGTGGGAACCGGCTTTGTGGCCAAGTCCCCGGCT
GACAGCGGCGCCATGGTGCTGGCGGCGGCCAGCCACAACATTGCCGGCTCGCTCTACACCAAACTCAACTACGACCCACA
AAAAGACTTTGCACCGATGGCACACATCGGCACCGCCGACTATGTGCTGATGATTCACCCCGATGTGCCGGCCAAAACCG
CCGGCGAGTACATCCGCCATGCCAAGGCCAATCCCGGCAAGATGAACTACGCCACCGCCGGCGTTGGCAGCGCCACGCAC
CTTTCCATGGCCTACTTCAACGGCCTGGCCGGCATCGATGTGGTGCATGTGCCGCTCAAGGCCACGGGCGAAGCCATCAA
TGAGGTGATTTCCGGCCGCGCGCAGGCCGTGATTGCGGCCAGCATAGGCGCGCTGGCGTTTGCCAGGGACAGCCGCATCC
GCCTGGTGGGCGTGACATCGCCCAAGCGGTCGAAATATCTACCCGACGTTCCGACCATTGCCGAAAGCGGATTGCCGGGC
TACCAGTTCAACTCCTGGTTTGGCCTGCTGGGCCCTGCTGGCACGCCGGCGGCCGACATCAGCCGCGTCAACGCCGCCGT
GGCCAGGCTGCTGAAAGATCCGGTCATCCTGGAGCGTCTGGACAAGCAGGGCATTGAGCCGCTGGCCATGAGCAACGCGG
ACTTTGCCAAGCTGCTGGCCACGGACTATGAGCGCATGGCGCAGGTCGTGAAGGCTTCGGGCGCGAAGGTCGAATAG

Upstream 100 bases:

>100_bases
TCACGCTGGAGCAGCTGGCCTGGTGCGAGCGCTTCATGCGCCGCCTGGCTGACGAAATTTGCGTGAACTGACTCCAGCAA
CCAACCAGAAAGACCACCCG

Downstream 100 bases:

>100_bases
ACCGCCGGCGGCGCCGGCAAAGCCCCGGCGCGAAGCATCAGCAACCCCTAGTACTCCGACCCAGAAATATCGAAACATGA
CAGCGCGCCTTCGAACCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MDRRELMAAGLALVAGSALAQANPKLARIVVPFAPGGVQDILARSLSTELGVALGQTVIVENRPGAGGTVGTGFVAKSPA
DSGAMVLAAASHNIAGSLYTKLNYDPQKDFAPMAHIGTADYVLMIHPDVPAKTAGEYIRHAKANPGKMNYATAGVGSATH
LSMAYFNGLAGIDVVHVPLKATGEAINEVISGRAQAVIAASIGALAFARDSRIRLVGVTSPKRSKYLPDVPTIAESGLPG
YQFNSWFGLLGPAGTPAADISRVNAAVARLLKDPVILERLDKQGIEPLAMSNADFAKLLATDYERMAQVVKASGAKVE

Sequences:

>Translated_318_residues
MDRRELMAAGLALVAGSALAQANPKLARIVVPFAPGGVQDILARSLSTELGVALGQTVIVENRPGAGGTVGTGFVAKSPA
DSGAMVLAAASHNIAGSLYTKLNYDPQKDFAPMAHIGTADYVLMIHPDVPAKTAGEYIRHAKANPGKMNYATAGVGSATH
LSMAYFNGLAGIDVVHVPLKATGEAINEVISGRAQAVIAASIGALAFARDSRIRLVGVTSPKRSKYLPDVPTIAESGLPG
YQFNSWFGLLGPAGTPAADISRVNAAVARLLKDPVILERLDKQGIEPLAMSNADFAKLLATDYERMAQVVKASGAKVE
>Mature_318_residues
MDRRELMAAGLALVAGSALAQANPKLARIVVPFAPGGVQDILARSLSTELGVALGQTVIVENRPGAGGTVGTGFVAKSPA
DSGAMVLAAASHNIAGSLYTKLNYDPQKDFAPMAHIGTADYVLMIHPDVPAKTAGEYIRHAKANPGKMNYATAGVGSATH
LSMAYFNGLAGIDVVHVPLKATGEAINEVISGRAQAVIAASIGALAFARDSRIRLVGVTSPKRSKYLPDVPTIAESGLPG
YQFNSWFGLLGPAGTPAADISRVNAAVARLLKDPVILERLDKQGIEPLAMSNADFAKLLATDYERMAQVVKASGAKVE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 32950; Mature: 32950

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRELMAAGLALVAGSALAQANPKLARIVVPFAPGGVQDILARSLSTELGVALGQTVIV
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEE
ENRPGAGGTVGTGFVAKSPADSGAMVLAAASHNIAGSLYTKLNYDPQKDFAPMAHIGTAD
ECCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCHHHCCCCC
YVLMIHPDVPAKTAGEYIRHAKANPGKMNYATAGVGSATHLSMAYFNGLAGIDVVHVPLK
EEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCEEEEECHH
ATGEAINEVISGRAQAVIAASIGALAFARDSRIRLVGVTSPKRSKYLPDVPTIAESGLPG
HHHHHHHHHHCCCHHEEHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCCHHHCCCCC
YQFNSWFGLLGPAGTPAADISRVNAAVARLLKDPVILERLDKQGIEPLAMSNADFAKLLA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEECCCCHHHHHHH
TDYERMAQVVKASGAKVE
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDRRELMAAGLALVAGSALAQANPKLARIVVPFAPGGVQDILARSLSTELGVALGQTVIV
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEE
ENRPGAGGTVGTGFVAKSPADSGAMVLAAASHNIAGSLYTKLNYDPQKDFAPMAHIGTAD
ECCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCHHHCCCCC
YVLMIHPDVPAKTAGEYIRHAKANPGKMNYATAGVGSATHLSMAYFNGLAGIDVVHVPLK
EEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCEEEEECHH
ATGEAINEVISGRAQAVIAASIGALAFARDSRIRLVGVTSPKRSKYLPDVPTIAESGLPG
HHHHHHHHHHCCCHHEEHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCCHHHCCCCC
YQFNSWFGLLGPAGTPAADISRVNAAVARLLKDPVILERLDKQGIEPLAMSNADFAKLLA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEECCCCHHHHHHH
TDYERMAQVVKASGAKVE
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]