Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yhjX [H]

Identifier: 91789256

GI number: 91789256

Start: 3597760

End: 3598944

Strand: Direct

Name: yhjX [H]

Synonym: Bpro_3401

Alternate gene names: 91789256

Gene position: 3597760-3598944 (Clockwise)

Preceding gene: 91789255

Following gene: 91789258

Centisome position: 69.18

GC content: 67.76

Gene sequence:

>1185_bases
ATGATCACGCTGGCGCTGATGACGGTGGGTGCCAGCGGCATGTATGTGGTGCCGGTGGTACTGCCGGCCGTGCAGGCCGA
TTTTGGCGTGGCGCGTGCCGATGCCTCACTGCCCTACACCCTGCTGATGATCGGATTCGGCCTGGGCGGCGTGCTGATGG
GGCGGCTGGCCGACCGGTTCGGCGTGATGGTGCCGCTGCTGATAGGAGCGGTGGGGCTGGGCCTGGGTTACGCCGCCGCG
GCGATGGCCAGCAACATCTGGATGTTCATGCTGGCGCACGGCTTCCTGGTCGGCCTGCTGGGCAGCTCGGCCACCTTCGC
GCCCCTGCTGGCCGACACGTCCCTGTGGTTTGTGCGGCGGCGCGGCATTGCGGTGGCGGTGTGCGCCAGCGGCAACTACG
TGGGCGGCGCCATCTGGCCGCCTGTCGTGCAGCATTTTGTGGAAGCCGTGGGCTGGCGCCAGACCTACCTGGGCCTGGGG
CTCTTCAGCGTGGTCACCATGGCAGGGCTGGCGCTGCTGATGCGCAAGCGCCCGCCGATGGCCGTGGCCGCGCCGGTCAA
CCGCCACTTTGCGGCCAGTCCCAGCAGCCTGCCCTTTGGCCTGCCACCGGGCAAGGCCCAGGTGCTGCTGTGCATTGCCG
GCGTGTCGTGCTGTGTGGCCATGGCCATGCCGCAGGTGCACATCGTTTCCTACTGCACCGACCTGGGCTACGGCGCGGCG
CGGGGCGCCGAGATGCTGTCGCTGATGCTGGCCTGTGGCGTGGTGAGCCGCCTCGTGTCGGGCCTCATCTGCGACCGCAT
CGGCGGCCTGCGCACGCTGCTGCTCGGCTCGGCCCTGCAGGGCATTGCGCTGCTGATGTTTTTGCCCTTCAACGGACTGG
TGTCGCTATACCTGATTGCCGCGCTGTTCGGCCTGTTCCAGGGGGGCATCGTGCCGTCCTACGCCATCATCGTGCGTGAA
TATTTTTTGCCGGCGGAAGCCGGCGCGCGCGTGGGAACGGTGATCATGGCGACCATGTTCGGCATGGCGCTGGGCGGCTG
GATGTCGGGCAAGGTGTTTGACCTCACGGGATCCTACCAGGCCGCCTTCCTCAATGGCATCGCGTGGAACCTGCTGAACC
TGGGCATCGCGGTATTTCTGCTTTGGCGCGTGCGCCCGCCACGCCGCATCACACAGCCGGCCTGA

Upstream 100 bases:

>100_bases
GTACTGCCTCGCCGATCAACGCTTCTTCCGGAGGTTCCCTCTGACCGCACCGCACGACCCCTCCGCCCTGGCTGATTCAC
GCTACGCGGTGGGACGCCTG

Downstream 100 bases:

>100_bases
ACGCTCCACCGGGCCGTCATCGGATTGCTATATTTTCAATAGCATTTCGCACCCAATGAACCGGAGTTGCAGTCGTTGCC
TGCTCCTGGATCAGGCAAGC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MITLALMTVGASGMYVVPVVLPAVQADFGVARADASLPYTLLMIGFGLGGVLMGRLADRFGVMVPLLIGAVGLGLGYAAA
AMASNIWMFMLAHGFLVGLLGSSATFAPLLADTSLWFVRRRGIAVAVCASGNYVGGAIWPPVVQHFVEAVGWRQTYLGLG
LFSVVTMAGLALLMRKRPPMAVAAPVNRHFAASPSSLPFGLPPGKAQVLLCIAGVSCCVAMAMPQVHIVSYCTDLGYGAA
RGAEMLSLMLACGVVSRLVSGLICDRIGGLRTLLLGSALQGIALLMFLPFNGLVSLYLIAALFGLFQGGIVPSYAIIVRE
YFLPAEAGARVGTVIMATMFGMALGGWMSGKVFDLTGSYQAAFLNGIAWNLLNLGIAVFLLWRVRPPRRITQPA

Sequences:

>Translated_394_residues
MITLALMTVGASGMYVVPVVLPAVQADFGVARADASLPYTLLMIGFGLGGVLMGRLADRFGVMVPLLIGAVGLGLGYAAA
AMASNIWMFMLAHGFLVGLLGSSATFAPLLADTSLWFVRRRGIAVAVCASGNYVGGAIWPPVVQHFVEAVGWRQTYLGLG
LFSVVTMAGLALLMRKRPPMAVAAPVNRHFAASPSSLPFGLPPGKAQVLLCIAGVSCCVAMAMPQVHIVSYCTDLGYGAA
RGAEMLSLMLACGVVSRLVSGLICDRIGGLRTLLLGSALQGIALLMFLPFNGLVSLYLIAALFGLFQGGIVPSYAIIVRE
YFLPAEAGARVGTVIMATMFGMALGGWMSGKVFDLTGSYQAAFLNGIAWNLLNLGIAVFLLWRVRPPRRITQPA
>Mature_394_residues
MITLALMTVGASGMYVVPVVLPAVQADFGVARADASLPYTLLMIGFGLGGVLMGRLADRFGVMVPLLIGAVGLGLGYAAA
AMASNIWMFMLAHGFLVGLLGSSATFAPLLADTSLWFVRRRGIAVAVCASGNYVGGAIWPPVVQHFVEAVGWRQTYLGLG
LFSVVTMAGLALLMRKRPPMAVAAPVNRHFAASPSSLPFGLPPGKAQVLLCIAGVSCCVAMAMPQVHIVSYCTDLGYGAA
RGAEMLSLMLACGVVSRLVSGLICDRIGGLRTLLLGSALQGIALLMFLPFNGLVSLYLIAALFGLFQGGIVPSYAIIVRE
YFLPAEAGARVGTVIMATMFGMALGGWMSGKVFDLTGSYQAAFLNGIAWNLLNLGIAVFLLWRVRPPRRITQPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI42475555, Length=323, Percent_Identity=28.1733746130031, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI291621700, Length=359, Percent_Identity=24.2339832869081, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1789969, Length=312, Percent_Identity=24.6794871794872, Blast_Score=78, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6324882, Length=330, Percent_Identity=22.7272727272727, Blast_Score=76, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6324453, Length=323, Percent_Identity=24.1486068111455, Blast_Score=71, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR004741 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41292; Mature: 41292

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLALMTVGASGMYVVPVVLPAVQADFGVARADASLPYTLLMIGFGLGGVLMGRLADRF
CEEEEEEEECCCCCEEHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GVMVPLLIGAVGLGLGYAAAAMASNIWMFMLAHGFLVGLLGSSATFAPLLADTSLWFVRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RGIAVAVCASGNYVGGAIWPPVVQHFVEAVGWRQTYLGLGLFSVVTMAGLALLMRKRPPM
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AVAAPVNRHFAASPSSLPFGLPPGKAQVLLCIAGVSCCVAMAMPQVHIVSYCTDLGYGAA
EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHH
RGAEMLSLMLACGVVSRLVSGLICDRIGGLRTLLLGSALQGIALLMFLPFNGLVSLYLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
ALFGLFQGGIVPSYAIIVREYFLPAEAGARVGTVIMATMFGMALGGWMSGKVFDLTGSYQ
HHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHH
AAFLNGIAWNLLNLGIAVFLLWRVRPPRRITQPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MITLALMTVGASGMYVVPVVLPAVQADFGVARADASLPYTLLMIGFGLGGVLMGRLADRF
CEEEEEEEECCCCCEEHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GVMVPLLIGAVGLGLGYAAAAMASNIWMFMLAHGFLVGLLGSSATFAPLLADTSLWFVRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RGIAVAVCASGNYVGGAIWPPVVQHFVEAVGWRQTYLGLGLFSVVTMAGLALLMRKRPPM
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AVAAPVNRHFAASPSSLPFGLPPGKAQVLLCIAGVSCCVAMAMPQVHIVSYCTDLGYGAA
EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHH
RGAEMLSLMLACGVVSRLVSGLICDRIGGLRTLLLGSALQGIALLMFLPFNGLVSLYLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
ALFGLFQGGIVPSYAIIVREYFLPAEAGARVGTVIMATMFGMALGGWMSGKVFDLTGSYQ
HHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHH
AAFLNGIAWNLLNLGIAVFLLWRVRPPRRITQPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]