Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is yhjX [H]
Identifier: 91789256
GI number: 91789256
Start: 3597760
End: 3598944
Strand: Direct
Name: yhjX [H]
Synonym: Bpro_3401
Alternate gene names: 91789256
Gene position: 3597760-3598944 (Clockwise)
Preceding gene: 91789255
Following gene: 91789258
Centisome position: 69.18
GC content: 67.76
Gene sequence:
>1185_bases ATGATCACGCTGGCGCTGATGACGGTGGGTGCCAGCGGCATGTATGTGGTGCCGGTGGTACTGCCGGCCGTGCAGGCCGA TTTTGGCGTGGCGCGTGCCGATGCCTCACTGCCCTACACCCTGCTGATGATCGGATTCGGCCTGGGCGGCGTGCTGATGG GGCGGCTGGCCGACCGGTTCGGCGTGATGGTGCCGCTGCTGATAGGAGCGGTGGGGCTGGGCCTGGGTTACGCCGCCGCG GCGATGGCCAGCAACATCTGGATGTTCATGCTGGCGCACGGCTTCCTGGTCGGCCTGCTGGGCAGCTCGGCCACCTTCGC GCCCCTGCTGGCCGACACGTCCCTGTGGTTTGTGCGGCGGCGCGGCATTGCGGTGGCGGTGTGCGCCAGCGGCAACTACG TGGGCGGCGCCATCTGGCCGCCTGTCGTGCAGCATTTTGTGGAAGCCGTGGGCTGGCGCCAGACCTACCTGGGCCTGGGG CTCTTCAGCGTGGTCACCATGGCAGGGCTGGCGCTGCTGATGCGCAAGCGCCCGCCGATGGCCGTGGCCGCGCCGGTCAA CCGCCACTTTGCGGCCAGTCCCAGCAGCCTGCCCTTTGGCCTGCCACCGGGCAAGGCCCAGGTGCTGCTGTGCATTGCCG GCGTGTCGTGCTGTGTGGCCATGGCCATGCCGCAGGTGCACATCGTTTCCTACTGCACCGACCTGGGCTACGGCGCGGCG CGGGGCGCCGAGATGCTGTCGCTGATGCTGGCCTGTGGCGTGGTGAGCCGCCTCGTGTCGGGCCTCATCTGCGACCGCAT CGGCGGCCTGCGCACGCTGCTGCTCGGCTCGGCCCTGCAGGGCATTGCGCTGCTGATGTTTTTGCCCTTCAACGGACTGG TGTCGCTATACCTGATTGCCGCGCTGTTCGGCCTGTTCCAGGGGGGCATCGTGCCGTCCTACGCCATCATCGTGCGTGAA TATTTTTTGCCGGCGGAAGCCGGCGCGCGCGTGGGAACGGTGATCATGGCGACCATGTTCGGCATGGCGCTGGGCGGCTG GATGTCGGGCAAGGTGTTTGACCTCACGGGATCCTACCAGGCCGCCTTCCTCAATGGCATCGCGTGGAACCTGCTGAACC TGGGCATCGCGGTATTTCTGCTTTGGCGCGTGCGCCCGCCACGCCGCATCACACAGCCGGCCTGA
Upstream 100 bases:
>100_bases GTACTGCCTCGCCGATCAACGCTTCTTCCGGAGGTTCCCTCTGACCGCACCGCACGACCCCTCCGCCCTGGCTGATTCAC GCTACGCGGTGGGACGCCTG
Downstream 100 bases:
>100_bases ACGCTCCACCGGGCCGTCATCGGATTGCTATATTTTCAATAGCATTTCGCACCCAATGAACCGGAGTTGCAGTCGTTGCC TGCTCCTGGATCAGGCAAGC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MITLALMTVGASGMYVVPVVLPAVQADFGVARADASLPYTLLMIGFGLGGVLMGRLADRFGVMVPLLIGAVGLGLGYAAA AMASNIWMFMLAHGFLVGLLGSSATFAPLLADTSLWFVRRRGIAVAVCASGNYVGGAIWPPVVQHFVEAVGWRQTYLGLG LFSVVTMAGLALLMRKRPPMAVAAPVNRHFAASPSSLPFGLPPGKAQVLLCIAGVSCCVAMAMPQVHIVSYCTDLGYGAA RGAEMLSLMLACGVVSRLVSGLICDRIGGLRTLLLGSALQGIALLMFLPFNGLVSLYLIAALFGLFQGGIVPSYAIIVRE YFLPAEAGARVGTVIMATMFGMALGGWMSGKVFDLTGSYQAAFLNGIAWNLLNLGIAVFLLWRVRPPRRITQPA
Sequences:
>Translated_394_residues MITLALMTVGASGMYVVPVVLPAVQADFGVARADASLPYTLLMIGFGLGGVLMGRLADRFGVMVPLLIGAVGLGLGYAAA AMASNIWMFMLAHGFLVGLLGSSATFAPLLADTSLWFVRRRGIAVAVCASGNYVGGAIWPPVVQHFVEAVGWRQTYLGLG LFSVVTMAGLALLMRKRPPMAVAAPVNRHFAASPSSLPFGLPPGKAQVLLCIAGVSCCVAMAMPQVHIVSYCTDLGYGAA RGAEMLSLMLACGVVSRLVSGLICDRIGGLRTLLLGSALQGIALLMFLPFNGLVSLYLIAALFGLFQGGIVPSYAIIVRE YFLPAEAGARVGTVIMATMFGMALGGWMSGKVFDLTGSYQAAFLNGIAWNLLNLGIAVFLLWRVRPPRRITQPA >Mature_394_residues MITLALMTVGASGMYVVPVVLPAVQADFGVARADASLPYTLLMIGFGLGGVLMGRLADRFGVMVPLLIGAVGLGLGYAAA AMASNIWMFMLAHGFLVGLLGSSATFAPLLADTSLWFVRRRGIAVAVCASGNYVGGAIWPPVVQHFVEAVGWRQTYLGLG LFSVVTMAGLALLMRKRPPMAVAAPVNRHFAASPSSLPFGLPPGKAQVLLCIAGVSCCVAMAMPQVHIVSYCTDLGYGAA RGAEMLSLMLACGVVSRLVSGLICDRIGGLRTLLLGSALQGIALLMFLPFNGLVSLYLIAALFGLFQGGIVPSYAIIVRE YFLPAEAGARVGTVIMATMFGMALGGWMSGKVFDLTGSYQAAFLNGIAWNLLNLGIAVFLLWRVRPPRRITQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42475555, Length=323, Percent_Identity=28.1733746130031, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI291621700, Length=359, Percent_Identity=24.2339832869081, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1789969, Length=312, Percent_Identity=24.6794871794872, Blast_Score=78, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6324882, Length=330, Percent_Identity=22.7272727272727, Blast_Score=76, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6324453, Length=323, Percent_Identity=24.1486068111455, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41292; Mature: 41292
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLALMTVGASGMYVVPVVLPAVQADFGVARADASLPYTLLMIGFGLGGVLMGRLADRF CEEEEEEEECCCCCEEHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH GVMVPLLIGAVGLGLGYAAAAMASNIWMFMLAHGFLVGLLGSSATFAPLLADTSLWFVRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RGIAVAVCASGNYVGGAIWPPVVQHFVEAVGWRQTYLGLGLFSVVTMAGLALLMRKRPPM CCCEEEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AVAAPVNRHFAASPSSLPFGLPPGKAQVLLCIAGVSCCVAMAMPQVHIVSYCTDLGYGAA EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHH RGAEMLSLMLACGVVSRLVSGLICDRIGGLRTLLLGSALQGIALLMFLPFNGLVSLYLIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH ALFGLFQGGIVPSYAIIVREYFLPAEAGARVGTVIMATMFGMALGGWMSGKVFDLTGSYQ HHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHH AAFLNGIAWNLLNLGIAVFLLWRVRPPRRITQPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MITLALMTVGASGMYVVPVVLPAVQADFGVARADASLPYTLLMIGFGLGGVLMGRLADRF CEEEEEEEECCCCCEEHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH GVMVPLLIGAVGLGLGYAAAAMASNIWMFMLAHGFLVGLLGSSATFAPLLADTSLWFVRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RGIAVAVCASGNYVGGAIWPPVVQHFVEAVGWRQTYLGLGLFSVVTMAGLALLMRKRPPM CCCEEEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AVAAPVNRHFAASPSSLPFGLPPGKAQVLLCIAGVSCCVAMAMPQVHIVSYCTDLGYGAA EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHH RGAEMLSLMLACGVVSRLVSGLICDRIGGLRTLLLGSALQGIALLMFLPFNGLVSLYLIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH ALFGLFQGGIVPSYAIIVREYFLPAEAGARVGTVIMATMFGMALGGWMSGKVFDLTGSYQ HHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHH AAFLNGIAWNLLNLGIAVFLLWRVRPPRRITQPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]