Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789255
Identifier: 91789255
GI number: 91789255
Start: 3596889
End: 3597536
Strand: Direct
Name: 91789255
Synonym: Bpro_3400
Alternate gene names: NA
Gene position: 3596889-3597536 (Clockwise)
Preceding gene: 91789253
Following gene: 91789256
Centisome position: 69.17
GC content: 64.35
Gene sequence:
>648_bases ATGAACCATCTGATGCGCATGCTGTTTGGCGGCCGGGCTCCAGCCCAGCCGGTCCAGAGGGCAGCACCCACGAGCCGCGC GATGCCTCTTAGCCAGGACGATAGCTCGGAAAACGCCACCCGCACCCAGCTAGTCCAGGTCCTGTTGCGCGATGTACTGC GCAGGCACGGCATACCCTTTAACTGGGTCGAGTCCCAGATGCTGGTCGTGGCCAGCCGCAGCCGTGGCAGCGGCATGTAT GTGCGCCTGATCATGAAGCACTGGGATGACCGGCTGATAACCCACGCCTTTGCCCTGCAGAACACGCTGCTGGCCGACAT TGCACGTTTTGAGCCACGAGCCTTCGACTGGCTGCACGGCGTTTCCTGGCAACTCGACGTGGACGGGAGCTGCCCTCACA CCTTCCTGCCCCACAAGACCTACTGGCAGGAGCCGGCAATACCGGCGACTCCCGGTGCAGCTGCAGCGCCGGCGCCAGTG GTGACTCCTCCGACTCCCGCGGCCCCGACGGCCGTATCCGTGTCGGAGCAGGAGGCACTGCAGGATCTGGAACGCCTGTT CATGATCCGCGACCAGGAGATCGGCCGCCAGGCGGCCGATGGAAAACCGCCCGTGGGCTACGAAAAAACCAAGCCAACGC CGCTTTGA
Upstream 100 bases:
>100_bases ACACTTTCCCGCGAAGCCTTTTTAACCAATACACCCAGGCCCGCTACTCCGGGCTCCCCCGCAAGAGACAATGCGACGTT TGAGCGCCTGTAAGTAAAGA
Downstream 100 bases:
>100_bases ATCGGTGACGCAGCAGATTTGATCTTTTCGTGTCCATCGCTGACCTGCCAGGCCGCTCCGGACGGCCAGGTCTAGCGGCG TTAACATCGGTTGCCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MNHLMRMLFGGRAPAQPVQRAAPTSRAMPLSQDDSSENATRTQLVQVLLRDVLRRHGIPFNWVESQMLVVASRSRGSGMY VRLIMKHWDDRLITHAFALQNTLLADIARFEPRAFDWLHGVSWQLDVDGSCPHTFLPHKTYWQEPAIPATPGAAAAPAPV VTPPTPAAPTAVSVSEQEALQDLERLFMIRDQEIGRQAADGKPPVGYEKTKPTPL
Sequences:
>Translated_215_residues MNHLMRMLFGGRAPAQPVQRAAPTSRAMPLSQDDSSENATRTQLVQVLLRDVLRRHGIPFNWVESQMLVVASRSRGSGMY VRLIMKHWDDRLITHAFALQNTLLADIARFEPRAFDWLHGVSWQLDVDGSCPHTFLPHKTYWQEPAIPATPGAAAAPAPV VTPPTPAAPTAVSVSEQEALQDLERLFMIRDQEIGRQAADGKPPVGYEKTKPTPL >Mature_215_residues MNHLMRMLFGGRAPAQPVQRAAPTSRAMPLSQDDSSENATRTQLVQVLLRDVLRRHGIPFNWVESQMLVVASRSRGSGMY VRLIMKHWDDRLITHAFALQNTLLADIARFEPRAFDWLHGVSWQLDVDGSCPHTFLPHKTYWQEPAIPATPGAAAAPAPV VTPPTPAAPTAVSVSEQEALQDLERLFMIRDQEIGRQAADGKPPVGYEKTKPTPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23889; Mature: 23889
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHLMRMLFGGRAPAQPVQRAAPTSRAMPLSQDDSSENATRTQLVQVLLRDVLRRHGIPF CHHHHHHHHCCCCCCCHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC NWVESQMLVVASRSRGSGMYVRLIMKHWDDRLITHAFALQNTLLADIARFEPRAFDWLHG CHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC VSWQLDVDGSCPHTFLPHKTYWQEPAIPATPGAAAAPAPVVTPPTPAAPTAVSVSEQEAL CCEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHH QDLERLFMIRDQEIGRQAADGKPPVGYEKTKPTPL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNHLMRMLFGGRAPAQPVQRAAPTSRAMPLSQDDSSENATRTQLVQVLLRDVLRRHGIPF CHHHHHHHHCCCCCCCHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC NWVESQMLVVASRSRGSGMYVRLIMKHWDDRLITHAFALQNTLLADIARFEPRAFDWLHG CHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC VSWQLDVDGSCPHTFLPHKTYWQEPAIPATPGAAAAPAPVVTPPTPAAPTAVSVSEQEAL CCEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHH QDLERLFMIRDQEIGRQAADGKPPVGYEKTKPTPL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA