Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789258

Identifier: 91789258

GI number: 91789258

Start: 3600000

End: 3600236

Strand: Direct

Name: 91789258

Synonym: Bpro_3403

Alternate gene names: NA

Gene position: 3600000-3600236 (Clockwise)

Preceding gene: 91789256

Following gene: 91789261

Centisome position: 69.23

GC content: 59.49

Gene sequence:

>237_bases
ATGAAATTCATCATTGCGGCCATGGCCCTGGCGACGTCCTCACTGGCTTTGGCCTACCACTGCCCCAACGAGATGAAGGC
GATCGACGCCAAACTGGCCACCAACCCCACGCTGTCTGCCGCGGACATGGGCAAAGTCAAGGACTTGCGCGCCGAAGGGG
AGAAGCTCCACAAGGCAGGCAAGCACGACGAGTCATTGAAAGCGCTCGACAGCGCCAAGAAACTGCTGGGGATCTGA

Upstream 100 bases:

>100_bases
AGGCACATGCTTGACTCTGCGGGCGACCACCCCTTTTACGCCGGCGCTGTATTTGCTAGCATGAACCGTCAGCATTTTCT
GACGCAAGCGGGATATCCGG

Downstream 100 bases:

>100_bases
GACCCTGCACTGCTCTGATCTGAAGAGCAACTGCAAGCGCTTGAAACTTCGCCCTGGCGCTGCGGTGCGGCAGTCCGCTG
CGCAAATGGGCCGTCAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MKFIIAAMALATSSLALAYHCPNEMKAIDAKLATNPTLSAADMGKVKDLRAEGEKLHKAGKHDESLKALDSAKKLLGI

Sequences:

>Translated_78_residues
MKFIIAAMALATSSLALAYHCPNEMKAIDAKLATNPTLSAADMGKVKDLRAEGEKLHKAGKHDESLKALDSAKKLLGI
>Mature_78_residues
MKFIIAAMALATSSLALAYHCPNEMKAIDAKLATNPTLSAADMGKVKDLRAEGEKLHKAGKHDESLKALDSAKKLLGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8278; Mature: 8278

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIIAAMALATSSLALAYHCPNEMKAIDAKLATNPTLSAADMGKVKDLRAEGEKLHKAG
CHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC
KHDESLKALDSAKKLLGI
CCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFIIAAMALATSSLALAYHCPNEMKAIDAKLATNPTLSAADMGKVKDLRAEGEKLHKAG
CHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC
KHDESLKALDSAKKLLGI
CCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA