Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is yqjF [C]
Identifier: 91789204
GI number: 91789204
Start: 3545009
End: 3545449
Strand: Direct
Name: yqjF [C]
Synonym: Bpro_3348
Alternate gene names: 91789204
Gene position: 3545009-3545449 (Clockwise)
Preceding gene: 91789203
Following gene: 91789206
Centisome position: 68.17
GC content: 61.68
Gene sequence:
>441_bases ATGACGCACAACAACTCTGCACTCAACCCTGCACTCAACTCAGCGCTCAGTCTCATGCTGGGCCGTACCCTGCTTGGCGC CCTGTTCCTCATCTCCGGTCTCGCCAAAATCGGGCGGTTCGCCGGTATCGCTGCTTTTATGACATCCAAAGGCCTGCCTG CCGCCGAAATGCTGCTCATGGCCACCATTGCGCTGGAGGTGGCCGGTGGCCTTGCCCTGATTGCGGGCTGGCGTGTCCGG TATGCGGCATGGGCCTTGCTGGTATTCACAGGCCTGGCAGCCGTGATCTTTCATGCCTTCTGGGCCGCGGAAGCCCCTGC CTACCAGAACCAGCTGAATCACTTTCTGAAGAACGTCGCCATCATGGGGGGTCTGCTCTGCGTTGGCGCTGCGGGCGCCG GGTCGTGGAGCTTTGATGGGCGCAGGCCGACAAAGGCATGA
Upstream 100 bases:
>100_bases CGAAACCAAAAAATGGCACAAGCTGATCCGCGAGCGCGGCATCACCCTCGAACAGTAGACGGCCCCCTCACCTTATTCAC GAAACGCAATGGAGACATCA
Downstream 100 bases:
>100_bases ATGCCTGCACCGACTTCGGCTGCACCCATAAAAAAGCCTGCACGAAGCAGGCTTTTTTGATTCAGTCTTGATCCGGTTCT GATTCAGGCCGGATCAACAC
Product: DoxX
Products: NA
Alternate protein names: DoxD-Like Family Protein; Transmembrane Protein; DoxX Family Membrane Protein; DoxX Subfamily; SURF4 Domain-Containing Protein; Quinol Oxidase Subunit
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTHNNSALNPALNSALSLMLGRTLLGALFLISGLAKIGRFAGIAAFMTSKGLPAAEMLLMATIALEVAGGLALIAGWRVR YAAWALLVFTGLAAVIFHAFWAAEAPAYQNQLNHFLKNVAIMGGLLCVGAAGAGSWSFDGRRPTKA
Sequences:
>Translated_146_residues MTHNNSALNPALNSALSLMLGRTLLGALFLISGLAKIGRFAGIAAFMTSKGLPAAEMLLMATIALEVAGGLALIAGWRVR YAAWALLVFTGLAAVIFHAFWAAEAPAYQNQLNHFLKNVAIMGGLLCVGAAGAGSWSFDGRRPTKA >Mature_145_residues THNNSALNPALNSALSLMLGRTLLGALFLISGLAKIGRFAGIAAFMTSKGLPAAEMLLMATIALEVAGGLALIAGWRVRY AAWALLVFTGLAAVIFHAFWAAEAPAYQNQLNHFLKNVAIMGGLLCVGAAGAGSWSFDGRRPTKA
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15215; Mature: 15084
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHNNSALNPALNSALSLMLGRTLLGALFLISGLAKIGRFAGIAAFMTSKGLPAAEMLLM CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ATIALEVAGGLALIAGWRVRYAAWALLVFTGLAAVIFHAFWAAEAPAYQNQLNHFLKNVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IMGGLLCVGAAGAGSWSFDGRRPTKA HHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure THNNSALNPALNSALSLMLGRTLLGALFLISGLAKIGRFAGIAAFMTSKGLPAAEMLLM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ATIALEVAGGLALIAGWRVRYAAWALLVFTGLAAVIFHAFWAAEAPAYQNQLNHFLKNVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IMGGLLCVGAAGAGSWSFDGRRPTKA HHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA