Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yqjF [C]

Identifier: 91789204

GI number: 91789204

Start: 3545009

End: 3545449

Strand: Direct

Name: yqjF [C]

Synonym: Bpro_3348

Alternate gene names: 91789204

Gene position: 3545009-3545449 (Clockwise)

Preceding gene: 91789203

Following gene: 91789206

Centisome position: 68.17

GC content: 61.68

Gene sequence:

>441_bases
ATGACGCACAACAACTCTGCACTCAACCCTGCACTCAACTCAGCGCTCAGTCTCATGCTGGGCCGTACCCTGCTTGGCGC
CCTGTTCCTCATCTCCGGTCTCGCCAAAATCGGGCGGTTCGCCGGTATCGCTGCTTTTATGACATCCAAAGGCCTGCCTG
CCGCCGAAATGCTGCTCATGGCCACCATTGCGCTGGAGGTGGCCGGTGGCCTTGCCCTGATTGCGGGCTGGCGTGTCCGG
TATGCGGCATGGGCCTTGCTGGTATTCACAGGCCTGGCAGCCGTGATCTTTCATGCCTTCTGGGCCGCGGAAGCCCCTGC
CTACCAGAACCAGCTGAATCACTTTCTGAAGAACGTCGCCATCATGGGGGGTCTGCTCTGCGTTGGCGCTGCGGGCGCCG
GGTCGTGGAGCTTTGATGGGCGCAGGCCGACAAAGGCATGA

Upstream 100 bases:

>100_bases
CGAAACCAAAAAATGGCACAAGCTGATCCGCGAGCGCGGCATCACCCTCGAACAGTAGACGGCCCCCTCACCTTATTCAC
GAAACGCAATGGAGACATCA

Downstream 100 bases:

>100_bases
ATGCCTGCACCGACTTCGGCTGCACCCATAAAAAAGCCTGCACGAAGCAGGCTTTTTTGATTCAGTCTTGATCCGGTTCT
GATTCAGGCCGGATCAACAC

Product: DoxX

Products: NA

Alternate protein names: DoxD-Like Family Protein; Transmembrane Protein; DoxX Family Membrane Protein; DoxX Subfamily; SURF4 Domain-Containing Protein; Quinol Oxidase Subunit

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTHNNSALNPALNSALSLMLGRTLLGALFLISGLAKIGRFAGIAAFMTSKGLPAAEMLLMATIALEVAGGLALIAGWRVR
YAAWALLVFTGLAAVIFHAFWAAEAPAYQNQLNHFLKNVAIMGGLLCVGAAGAGSWSFDGRRPTKA

Sequences:

>Translated_146_residues
MTHNNSALNPALNSALSLMLGRTLLGALFLISGLAKIGRFAGIAAFMTSKGLPAAEMLLMATIALEVAGGLALIAGWRVR
YAAWALLVFTGLAAVIFHAFWAAEAPAYQNQLNHFLKNVAIMGGLLCVGAAGAGSWSFDGRRPTKA
>Mature_145_residues
THNNSALNPALNSALSLMLGRTLLGALFLISGLAKIGRFAGIAAFMTSKGLPAAEMLLMATIALEVAGGLALIAGWRVRY
AAWALLVFTGLAAVIFHAFWAAEAPAYQNQLNHFLKNVAIMGGLLCVGAAGAGSWSFDGRRPTKA

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15215; Mature: 15084

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHNNSALNPALNSALSLMLGRTLLGALFLISGLAKIGRFAGIAAFMTSKGLPAAEMLLM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ATIALEVAGGLALIAGWRVRYAAWALLVFTGLAAVIFHAFWAAEAPAYQNQLNHFLKNVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IMGGLLCVGAAGAGSWSFDGRRPTKA
HHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
THNNSALNPALNSALSLMLGRTLLGALFLISGLAKIGRFAGIAAFMTSKGLPAAEMLLM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ATIALEVAGGLALIAGWRVRYAAWALLVFTGLAAVIFHAFWAAEAPAYQNQLNHFLKNVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IMGGLLCVGAAGAGSWSFDGRRPTKA
HHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA