Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yiaY [H]

Identifier: 91789182

GI number: 91789182

Start: 3520863

End: 3522119

Strand: Direct

Name: yiaY [H]

Synonym: Bpro_3326

Alternate gene names: 91789182

Gene position: 3520863-3522119 (Clockwise)

Preceding gene: 91789179

Following gene: 91789183

Centisome position: 67.71

GC content: 61.34

Gene sequence:

>1257_bases
ATGCCTGCGAACCCCGCTCAGCCCGATATCAATCCCATCTTTTTTTGCTCCCCCACCCGAATCATGTTTGGCGCCGGCGT
GCGTACCGAACTGCCGCCACTCCTTGCGCAATTGGGCTACCAGCGTGCAGCGATCGTCACCGACCGGTTCTTCTCCGCGC
CAGGTCGCGCCGCCTCGGAACTGGTTGATGGGTTGAAAAGGGTTGGCATCAGTTCGGTCATGTTTGACGGCGGCCTGCCC
GATCCTTCCCTGGAACTATGCGATCGGGCCAGTGCGCACTTGCGGGAGCAGGGAGCAGTTGACTGCGTGATTGCCGTTGG
AGGGGGAAGCAACATTGATCTCGCCAAGGTAATGACGCTTACGTTGACCAGCCATCACGCCGCGGCACATTACGTCGGAA
AGCCGAGGCTGGATACGAAGCCGCTGCCGCTCATCGCGATGCCAACCACGGCTGGCACGGCTTCTGAAATCACCCCGGGC
GCGATTCTTGTTTCGGGAGATGGGCAGACCAAGGTTGCGGTGATGGATAACGAGTTGCGGGCTCGCATCGCTGTTATCGA
TCCCGAACTCACGCTGTCATGCCCGCCCCGCGTGACCGCTGATGCAGGTGTGGATGCGCTGACCCATGCCATTGAATCGT
TCATCACGATGGACGCCAGCGATTTCAACCGCGAAGGACAGGCTGACCCGGGTTATTCAGGCCGCAATGCCCTCACCCGC
ATCTTTGCGCGGGAAGCCATTCGCTTGTGCTTCGCCCACCTGCAAAGAGCTTACCGGTGCCCGGACGACATTCAGGCGCG
CACCGGCATGGCGCTCGCAAGCTTGTACGCAGGCATGTCCTATGGGAATGCAGGACTTCACGCTGTCCACGCATTGGCGT
ATGGCGTAGCCGCGCTCACGCATGAGTCGCATGGCACCACCAACGCGGTCATGCTGCCATATGTAATGGCGGAACTTGCC
GCTGATCGGATGGAGGACCTGTGCGAAATCGCCCGGATGGCAAACGTCCATCACGAGCCGCACAGTTCGCTGAAAGGAGC
GGCGGCGGGCGCCCACCATGTAAGAGAGCTGATCAGGTCAGTCGGCATTGCAACCACGCTCGCCGAGCTCGGAGTCACCG
CTCCAGACCTGGGTCGCGTTGCGGCGGCGGGAATTGCCGTCACCCGCCTCACCAAAGCCTTTCCCGGTGGACAGGCAGAG
CGGCGGTACCTGGAGATTGTTCATGCCGCCTTTCAGGGCACGCTTCCCGATGCCTGA

Upstream 100 bases:

>100_bases
GGTGTTCACAGAATCTCCTAACAAGTGAAAGCTGCTGGTCGAATGCCTGATGGACTGGTAATATATCACTCACATATCTT
TTTTGTCAATGGAGACTGAA

Downstream 100 bases:

>100_bases
TAGCTCAGGTGTATGGAGTGCGTATGGAGTGTGTATGGAGATGAGATACTAGTCATATCGACAGGAGGTATTTTGGCAAC
AAGCAAAAAAATTCGGCCAA

Product: iron-containing alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MPANPAQPDINPIFFCSPTRIMFGAGVRTELPPLLAQLGYQRAAIVTDRFFSAPGRAASELVDGLKRVGISSVMFDGGLP
DPSLELCDRASAHLREQGAVDCVIAVGGGSNIDLAKVMTLTLTSHHAAAHYVGKPRLDTKPLPLIAMPTTAGTASEITPG
AILVSGDGQTKVAVMDNELRARIAVIDPELTLSCPPRVTADAGVDALTHAIESFITMDASDFNREGQADPGYSGRNALTR
IFAREAIRLCFAHLQRAYRCPDDIQARTGMALASLYAGMSYGNAGLHAVHALAYGVAALTHESHGTTNAVMLPYVMAELA
ADRMEDLCEIARMANVHHEPHSSLKGAAAGAHHVRELIRSVGIATTLAELGVTAPDLGRVAAAGIAVTRLTKAFPGGQAE
RRYLEIVHAAFQGTLPDA

Sequences:

>Translated_418_residues
MPANPAQPDINPIFFCSPTRIMFGAGVRTELPPLLAQLGYQRAAIVTDRFFSAPGRAASELVDGLKRVGISSVMFDGGLP
DPSLELCDRASAHLREQGAVDCVIAVGGGSNIDLAKVMTLTLTSHHAAAHYVGKPRLDTKPLPLIAMPTTAGTASEITPG
AILVSGDGQTKVAVMDNELRARIAVIDPELTLSCPPRVTADAGVDALTHAIESFITMDASDFNREGQADPGYSGRNALTR
IFAREAIRLCFAHLQRAYRCPDDIQARTGMALASLYAGMSYGNAGLHAVHALAYGVAALTHESHGTTNAVMLPYVMAELA
ADRMEDLCEIARMANVHHEPHSSLKGAAAGAHHVRELIRSVGIATTLAELGVTAPDLGRVAAAGIAVTRLTKAFPGGQAE
RRYLEIVHAAFQGTLPDA
>Mature_417_residues
PANPAQPDINPIFFCSPTRIMFGAGVRTELPPLLAQLGYQRAAIVTDRFFSAPGRAASELVDGLKRVGISSVMFDGGLPD
PSLELCDRASAHLREQGAVDCVIAVGGGSNIDLAKVMTLTLTSHHAAAHYVGKPRLDTKPLPLIAMPTTAGTASEITPGA
ILVSGDGQTKVAVMDNELRARIAVIDPELTLSCPPRVTADAGVDALTHAIESFITMDASDFNREGQADPGYSGRNALTRI
FAREAIRLCFAHLQRAYRCPDDIQARTGMALASLYAGMSYGNAGLHAVHALAYGVAALTHESHGTTNAVMLPYVMAELAA
DRMEDLCEIARMANVHHEPHSSLKGAAAGAHHVRELIRSVGIATTLAELGVTAPDLGRVAAAGIAVTRLTKAFPGGQAER
RYLEIVHAAFQGTLPDA

Specific function: Unknown

COG id: COG1454

COG function: function code C; Alcohol dehydrogenase, class IV

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI133922590, Length=425, Percent_Identity=29.1764705882353, Blast_Score=146, Evalue=3e-35,
Organism=Escherichia coli, GI48994951, Length=370, Percent_Identity=32.7027027027027, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI1789163, Length=366, Percent_Identity=31.4207650273224, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI87082107, Length=347, Percent_Identity=32.8530259365994, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1787493, Length=331, Percent_Identity=29.607250755287, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1789386, Length=385, Percent_Identity=25.4545454545455, Blast_Score=83, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17537053, Length=293, Percent_Identity=33.7883959044369, Blast_Score=139, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6321181, Length=370, Percent_Identity=32.972972972973, Blast_Score=158, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24657991, Length=428, Percent_Identity=30.1401869158879, Blast_Score=139, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670
- InterPro:   IPR018211 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: =1.1.1.1 [H]

Molecular weight: Translated: 44049; Mature: 43918

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPANPAQPDINPIFFCSPTRIMFGAGVRTELPPLLAQLGYQRAAIVTDRFFSAPGRAASE
CCCCCCCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHH
LVDGLKRVGISSVMFDGGLPDPSLELCDRASAHLREQGAVDCVIAVGGGSNIDLAKVMTL
HHHHHHHCCHHHEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHEEE
TLTSHHAAAHYVGKPRLDTKPLPLIAMPTTAGTASEITPGAILVSGDGQTKVAVMDNELR
HHHCCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCE
ARIAVIDPELTLSCPPRVTADAGVDALTHAIESFITMDASDFNREGQADPGYSGRNALTR
EEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHH
IFAREAIRLCFAHLQRAYRCPDDIQARTGMALASLYAGMSYGNAGLHAVHALAYGVAALT
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
HESHGTTNAVMLPYVMAELAADRMEDLCEIARMANVHHEPHSSLKGAAAGAHHVRELIRS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHH
VGIATTLAELGVTAPDLGRVAAAGIAVTRLTKAFPGGQAERRYLEIVHAAFQGTLPDA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PANPAQPDINPIFFCSPTRIMFGAGVRTELPPLLAQLGYQRAAIVTDRFFSAPGRAASE
CCCCCCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHH
LVDGLKRVGISSVMFDGGLPDPSLELCDRASAHLREQGAVDCVIAVGGGSNIDLAKVMTL
HHHHHHHCCHHHEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHEEE
TLTSHHAAAHYVGKPRLDTKPLPLIAMPTTAGTASEITPGAILVSGDGQTKVAVMDNELR
HHHCCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCE
ARIAVIDPELTLSCPPRVTADAGVDALTHAIESFITMDASDFNREGQADPGYSGRNALTR
EEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHH
IFAREAIRLCFAHLQRAYRCPDDIQARTGMALASLYAGMSYGNAGLHAVHALAYGVAALT
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
HESHGTTNAVMLPYVMAELAADRMEDLCEIARMANVHHEPHSSLKGAAAGAHHVRELIRS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHH
VGIATTLAELGVTAPDLGRVAAAGIAVTRLTKAFPGGQAERRYLEIVHAAFQGTLPDA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 7768815 [H]