Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788981

Identifier: 91788981

GI number: 91788981

Start: 3294935

End: 3296122

Strand: Reverse

Name: 91788981

Synonym: Bpro_3121

Alternate gene names: NA

Gene position: 3296122-3294935 (Counterclockwise)

Preceding gene: 91788982

Following gene: 91788969

Centisome position: 63.38

GC content: 60.69

Gene sequence:

>1188_bases
ATGAAACCTGCCTCCTCCGAAATCGCATCTTCCGGCCTCGCTGCAGGCGACCTGCTGGCTGGATTGCCGCAGCCCCTGAA
TCCCGCCATTACGCAGACAAAAAATTATTTTGCCGCGCTGGAGAATTTTCAGCGCACCTTTGCCTTCAGGCAGGGCGACA
AAGTGCTGTTGCTGACCGACCCACTGCTCGATACGCGGGTCGCCGATGCTGTTACGGGCCTGGCGCGCGCGCGTGGCGCG
ACGGTACGGCAGTACATGGAAACCACCAGTCAGGTGATCGAGGTGCCCGAGTCAGTCAAGGTGCTGGTGGCCGAGGCCGA
CTTTGTGGTGTCGACCTGGTTCTGTTCGATTTTCGATCCGTTTTTTATTGCCCGGCGCGCGGCGGGCCAGCGCTGGGTCA
AGATCACGTATTTTCGCGATCTCGATCTGCTGCACACACCGCAGGCGCGTTTTCCAGCGGAGTTAATCGGCGAAATCATT
CGCGCCACAGCCAGGCGTTATCCGGCCGGCCGGGATTTCACGGTAAAGTTTTCAGATGTGCGGGGCAGCGATTTTTCCAT
TCAATACACGCCCGAGATGCGCGAGTTGCTGCTCGCCCACAACCGCTGGCGCGGCAAAATGTTTGCCGACGAGCCGGGTT
GCTATGTCCATTACCTGCCCACCCATGGCCCCAACCTGTGGGACCGTACGGCGCATCGCAACGACGCACAGGCGCCTGTT
GCAATGTCGGGCACGTTTTACCCCCAGTGGGCGGTTGGATTTGAAAAACCGTTTGAGGGACGAATAGGCTGCCGGTTTGA
AAGTGACACCATCGTGGAAGTCACGGGCGAATGCCGCGAGGCCGGCATCCTGCGCGAAATGCTGGTGGGCGGCCGGTTGA
TCGAGCTGGGTTGCGGTTTCAATCCGAAGGCGCCGCGCCACACGATCTACCCCGCCGGCTCCAACGCCCCGGGAGCGCTT
CACTTTGGCATTGATCTGGCCCGCCCAAGCGACTATATATTGCGCACCATGCCCCAGTGGGAAGAGCCACCCGTTCATAT
GGATCTGGTCGCGCTGGACAGCACGGTGACGGTGGGGGACGAGCCGCTGATCGACGGCGGCTTTTTATGTGGACTGCGCG
ACCCGGCCGTCAGGGCTGCGGCTGAAAAATTTGGCAACCCGGTCGAGCTGCTGGAAACCGCTGTCTGA

Upstream 100 bases:

>100_bases
GGCGATGCCGTCAGACGTTCGGGCGCTGCGCTTGACTGAGCCTTTATTCCCTGATTGATTCCTTGATTGATTCCCTGTAT
TCCGTTCAGACCTGATTGCC

Downstream 100 bases:

>100_bases
ATTGAGAGGCCAACACGGGGGAAGGCGCACGGCCTGCCTCGTCAAGGCTCGTTGAGGCGCCCTGGACGCGCCGCGCGCAA
GGCCTGTTATGGCCTGCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MKPASSEIASSGLAAGDLLAGLPQPLNPAITQTKNYFAALENFQRTFAFRQGDKVLLLTDPLLDTRVADAVTGLARARGA
TVRQYMETTSQVIEVPESVKVLVAEADFVVSTWFCSIFDPFFIARRAAGQRWVKITYFRDLDLLHTPQARFPAELIGEII
RATARRYPAGRDFTVKFSDVRGSDFSIQYTPEMRELLLAHNRWRGKMFADEPGCYVHYLPTHGPNLWDRTAHRNDAQAPV
AMSGTFYPQWAVGFEKPFEGRIGCRFESDTIVEVTGECREAGILREMLVGGRLIELGCGFNPKAPRHTIYPAGSNAPGAL
HFGIDLARPSDYILRTMPQWEEPPVHMDLVALDSTVTVGDEPLIDGGFLCGLRDPAVRAAAEKFGNPVELLETAV

Sequences:

>Translated_395_residues
MKPASSEIASSGLAAGDLLAGLPQPLNPAITQTKNYFAALENFQRTFAFRQGDKVLLLTDPLLDTRVADAVTGLARARGA
TVRQYMETTSQVIEVPESVKVLVAEADFVVSTWFCSIFDPFFIARRAAGQRWVKITYFRDLDLLHTPQARFPAELIGEII
RATARRYPAGRDFTVKFSDVRGSDFSIQYTPEMRELLLAHNRWRGKMFADEPGCYVHYLPTHGPNLWDRTAHRNDAQAPV
AMSGTFYPQWAVGFEKPFEGRIGCRFESDTIVEVTGECREAGILREMLVGGRLIELGCGFNPKAPRHTIYPAGSNAPGAL
HFGIDLARPSDYILRTMPQWEEPPVHMDLVALDSTVTVGDEPLIDGGFLCGLRDPAVRAAAEKFGNPVELLETAV
>Mature_395_residues
MKPASSEIASSGLAAGDLLAGLPQPLNPAITQTKNYFAALENFQRTFAFRQGDKVLLLTDPLLDTRVADAVTGLARARGA
TVRQYMETTSQVIEVPESVKVLVAEADFVVSTWFCSIFDPFFIARRAAGQRWVKITYFRDLDLLHTPQARFPAELIGEII
RATARRYPAGRDFTVKFSDVRGSDFSIQYTPEMRELLLAHNRWRGKMFADEPGCYVHYLPTHGPNLWDRTAHRNDAQAPV
AMSGTFYPQWAVGFEKPFEGRIGCRFESDTIVEVTGECREAGILREMLVGGRLIELGCGFNPKAPRHTIYPAGSNAPGAL
HFGIDLARPSDYILRTMPQWEEPPVHMDLVALDSTVTVGDEPLIDGGFLCGLRDPAVRAAAEKFGNPVELLETAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43733; Mature: 43733

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPASSEIASSGLAAGDLLAGLPQPLNPAITQTKNYFAALENFQRTFAFRQGDKVLLLTD
CCCCHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
PLLDTRVADAVTGLARARGATVRQYMETTSQVIEVPESVKVLVAEADFVVSTWFCSIFDP
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHEEEEEECCHHHHHHHHHHHHH
FFIARRAAGQRWVKITYFRDLDLLHTPQARFPAELIGEIIRATARRYPAGRDFTVKFSDV
HHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
RGSDFSIQYTPEMRELLLAHNRWRGKMFADEPGCYVHYLPTHGPNLWDRTAHRNDAQAPV
CCCCEEEEECHHHHHHHHHHCCCCCCEECCCCCCEEEECCCCCCCCHHHCCCCCCCCCCE
AMSGTFYPQWAVGFEKPFEGRIGCRFESDTIVEVTGECREAGILREMLVGGRLIELGCGF
EECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHCCEEEEECCCC
NPKAPRHTIYPAGSNAPGALHFGIDLARPSDYILRTMPQWEEPPVHMDLVALDSTVTVGD
CCCCCCCEEECCCCCCCCEEEEEEEECCCCHHHHHCCCCCCCCCCEEEEEEECCEEEECC
EPLIDGGFLCGLRDPAVRAAAEKFGNPVELLETAV
CCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MKPASSEIASSGLAAGDLLAGLPQPLNPAITQTKNYFAALENFQRTFAFRQGDKVLLLTD
CCCCHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
PLLDTRVADAVTGLARARGATVRQYMETTSQVIEVPESVKVLVAEADFVVSTWFCSIFDP
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHEEEEEECCHHHHHHHHHHHHH
FFIARRAAGQRWVKITYFRDLDLLHTPQARFPAELIGEIIRATARRYPAGRDFTVKFSDV
HHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
RGSDFSIQYTPEMRELLLAHNRWRGKMFADEPGCYVHYLPTHGPNLWDRTAHRNDAQAPV
CCCCEEEEECHHHHHHHHHHCCCCCCEECCCCCCEEEECCCCCCCCHHHCCCCCCCCCCE
AMSGTFYPQWAVGFEKPFEGRIGCRFESDTIVEVTGECREAGILREMLVGGRLIELGCGF
EECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHCCEEEEECCCC
NPKAPRHTIYPAGSNAPGALHFGIDLARPSDYILRTMPQWEEPPVHMDLVALDSTVTVGD
CCCCCCCEEECCCCCCCCEEEEEEEECCCCHHHHHCCCCCCCCCCEEEEEEECCEEEECC
EPLIDGGFLCGLRDPAVRAAAEKFGNPVELLETAV
CCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA