Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is yhhW [C]
Identifier: 91788761
GI number: 91788761
Start: 3061184
End: 3061885
Strand: Reverse
Name: yhhW [C]
Synonym: Bpro_2901
Alternate gene names: 91788761
Gene position: 3061885-3061184 (Counterclockwise)
Preceding gene: 91788767
Following gene: 91788760
Centisome position: 58.88
GC content: 60.68
Gene sequence:
>702_bases ATGATGACCTTAAGAACTTCCAGCGAACGCGGCTATGCCGACCACGGGTGGCTCAAGTCCTTCCATTCCTTCTCGTTTGC CGGCTATTACGACCCGGCCCACATGGGCTTTGGCAATCTGCGCGTCATCAATGAAGACCGCATCGCGGCGGGCAGGGGCT TTGGCACGCACAGCCACCGCGACATGGAAATCATCAGCTACGTACTGAGTGGCGAACTCGCGCACAAGGACAGCATCGGT AACGTGAAGGGTATCCCGCCCGGTGATGTTCAGCGCATGAGCGCAGGCACGGGCGTGCAGCACAGCGAATTCAACCATGC CGAGGGACAGACCACGCACTTCCTGCAGATCTGGATCGAACCGAACGTGACTGGGATCCCTCCCAGCTACGAGCAGAAAA CTTTTCTGGACACCGAGAAGCGCGGCGCACTGCGCCTGGTGGCTTCGCCGGACGGGGCACAGGGGTCGGTCATCATTCAT GCCGACGCCAGAATTCGTGCCGGGTTGTTTGACGGTGATGAATCTGCCACGCTGGCGCTGGATCCTTCGCGTAAAACCTA TGTGCACCTGATCCGGGGGCAGCTTGAGGTGAATGGGCAACTGCTTCGCGCGGGGGATGCGGCCGCGCTGCAATCGGAAA GCCGGTTGCAGCTCGCTCGCGGGCAGTCCGCCGAAGTGCTGGTATTTGACCTGGCACCCTGA
Upstream 100 bases:
>100_bases TTCAAATAATTTGAATGATGCCATCAAATGAAGGCAACGGCCACAAGGGTGCCGGAACTTACAGTGGAGTCATTGCAACG CACCTTGAAAGGAGCACCGG
Downstream 100 bases:
>100_bases AGCGTTGCCCGACTGAAAGCCTAAAGGCAGGCTCAAATTAATAGTGCTTGCCTATCGTATTTTTTTAATCCATCATTTTT CTCGTTTGTATTTTTAATAA
Product: Pirin-like protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MMTLRTSSERGYADHGWLKSFHSFSFAGYYDPAHMGFGNLRVINEDRIAAGRGFGTHSHRDMEIISYVLSGELAHKDSIG NVKGIPPGDVQRMSAGTGVQHSEFNHAEGQTTHFLQIWIEPNVTGIPPSYEQKTFLDTEKRGALRLVASPDGAQGSVIIH ADARIRAGLFDGDESATLALDPSRKTYVHLIRGQLEVNGQLLRAGDAAALQSESRLQLARGQSAEVLVFDLAP
Sequences:
>Translated_233_residues MMTLRTSSERGYADHGWLKSFHSFSFAGYYDPAHMGFGNLRVINEDRIAAGRGFGTHSHRDMEIISYVLSGELAHKDSIG NVKGIPPGDVQRMSAGTGVQHSEFNHAEGQTTHFLQIWIEPNVTGIPPSYEQKTFLDTEKRGALRLVASPDGAQGSVIIH ADARIRAGLFDGDESATLALDPSRKTYVHLIRGQLEVNGQLLRAGDAAALQSESRLQLARGQSAEVLVFDLAP >Mature_233_residues MMTLRTSSERGYADHGWLKSFHSFSFAGYYDPAHMGFGNLRVINEDRIAAGRGFGTHSHRDMEIISYVLSGELAHKDSIG NVKGIPPGDVQRMSAGTGVQHSEFNHAEGQTTHFLQIWIEPNVTGIPPSYEQKTFLDTEKRGALRLVASPDGAQGSVIIH ADARIRAGLFDGDESATLALDPSRKTYVHLIRGQLEVNGQLLRAGDAAALQSESRLQLARGQSAEVLVFDLAP
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Escherichia coli, GI1789847, Length=233, Percent_Identity=44.206008583691, Blast_Score=221, Evalue=5e-59, Organism=Escherichia coli, GI1789493, Length=236, Percent_Identity=30.5084745762712, Blast_Score=115, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 25397; Mature: 25397
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTLRTSSERGYADHGWLKSFHSFSFAGYYDPAHMGFGNLRVINEDRIAAGRGFGTHSHR CEEEECCCCCCCCCHHHHHHHHCCEEEEECCHHHCCCCCEEEEECCCEECCCCCCCCCCC DMEIISYVLSGELAHKDSIGNVKGIPPGDVQRMSAGTGVQHSEFNHAEGQTTHFLQIWIE HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEC PNVTGIPPSYEQKTFLDTEKRGALRLVASPDGAQGSVIIHADARIRAGLFDGDESATLAL CCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCEEEEEECCEEEEEEECCCCCEEEEE DPSRKTYVHLIRGQLEVNGQLLRAGDAAALQSESRLQLARGQSAEVLVFDLAP CCCCCEEEEEEECEEEECCEEEECCCHHHHCCCCHHHHHCCCCCEEEEEEECC >Mature Secondary Structure MMTLRTSSERGYADHGWLKSFHSFSFAGYYDPAHMGFGNLRVINEDRIAAGRGFGTHSHR CEEEECCCCCCCCCHHHHHHHHCCEEEEECCHHHCCCCCEEEEECCCEECCCCCCCCCCC DMEIISYVLSGELAHKDSIGNVKGIPPGDVQRMSAGTGVQHSEFNHAEGQTTHFLQIWIE HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEC PNVTGIPPSYEQKTFLDTEKRGALRLVASPDGAQGSVIIHADARIRAGLFDGDESATLAL CCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCEEEEEECCEEEEEEECCCCCEEEEE DPSRKTYVHLIRGQLEVNGQLLRAGDAAALQSESRLQLARGQSAEVLVFDLAP CCCCCEEEEEEECEEEECCEEEECCCHHHHCCCCHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]