Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788767
Identifier: 91788767
GI number: 91788767
Start: 3066838
End: 3067743
Strand: Reverse
Name: 91788767
Synonym: Bpro_2907
Alternate gene names: NA
Gene position: 3067743-3066838 (Counterclockwise)
Preceding gene: 91788768
Following gene: 91788761
Centisome position: 58.99
GC content: 61.92
Gene sequence:
>906_bases GTGACCCAGGTGTGGCTGCCGATTCCTTCGGTCAACGCCGACTACCAGCGTTCGCTGGAGAACAGTTTTTCCAGCAACGG CACGACACGGCTCACGCAAGACGGACGGGACGGCGTCAAGATGCTGTATGCGGAATTCCCTGCCGCGCAAGGCAAGCCCT TTGTTGAGTTGACCAGCCGGGTCCAGACCCAGGGCCGTGCGGTCGACTGGTCGCAGAAAACCGCCGCGCCGGAGGAGGCC GACACCCTGCGCTATTTCACGCGCCCCACGGCGCTGATCCCGACGGACGGCATCGTCCGGAAAATGGCGCTGTCAGCCAC GCGGGGGGCCAGGACCGATGTTGAAAAGGCGCAAAAACTCTACGACTGGATCGTGGCCAATACCTACCGTGAACCCAAGA TCCGCGGCTGCGGCGAAGGCGACATCAAGACCATGCTGGAAACCGGCAACCTTGGCGGCAAATGCGCCGATTTGAACGCA CTGTTTGTCGGCCTGTGCCGCTCCGAGGTTTATCTCAAGGGATACGGCTGGGCGGCGATGGATCCGGCCGACGTGGCCAA GGTCATGCGCCTGGAAACCGCCAACTGGATCAAAAACATCACGGACCCTGTCGTCGCGCCCGTCAACAAGGCCCTGTTTG GCGGCTGGGAAGGCAACTGGATGGCCTACAACGCTGCGCATGACGTGGCCCTGCCCAAGTCAAGCGGCGAGAAGCTGGGT TTCTTCATGTATCCGATCGCCGAAAACACGGAGGGGCGTGTTGACTCTACGCGCCGGACGATTTCAAGTACCAGATCACG GCCCGCGAAATCATGGCGTGAATGGCCCTTCGCGGGCCGCCCCACTTCCCCGGTCAGGGAAAATCCAGGCCAAACCGGCT CTGGAAATATCGGGCCTGTCCGGTGA
Upstream 100 bases:
>100_bases ATTTCGCGCAGACGCCCGCCCGCCAGACCTTTGCCCGCAAAGCGGGAGCTGGCGCACCTTCGAGGTCACAACACGCGTTG ACATCCTCAGGCCGCAGGGC
Downstream 100 bases:
>100_bases GCGGGTCGGTAAACGCGATGGACTTCGCCAGCAACTGCAGCGGGTAGCGGTAGTCGTCATCGGGCGTTGGTTGCACCGGC GGATACATCCGGTCGTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTQVWLPIPSVNADYQRSLENSFSSNGTTRLTQDGRDGVKMLYAEFPAAQGKPFVELTSRVQTQGRAVDWSQKTAAPEEA DTLRYFTRPTALIPTDGIVRKMALSATRGARTDVEKAQKLYDWIVANTYREPKIRGCGEGDIKTMLETGNLGGKCADLNA LFVGLCRSEVYLKGYGWAAMDPADVAKVMRLETANWIKNITDPVVAPVNKALFGGWEGNWMAYNAAHDVALPKSSGEKLG FFMYPIAENTEGRVDSTRRTISSTRSRPAKSWREWPFAGRPTSPVRENPGQTGSGNIGPVR
Sequences:
>Translated_301_residues MTQVWLPIPSVNADYQRSLENSFSSNGTTRLTQDGRDGVKMLYAEFPAAQGKPFVELTSRVQTQGRAVDWSQKTAAPEEA DTLRYFTRPTALIPTDGIVRKMALSATRGARTDVEKAQKLYDWIVANTYREPKIRGCGEGDIKTMLETGNLGGKCADLNA LFVGLCRSEVYLKGYGWAAMDPADVAKVMRLETANWIKNITDPVVAPVNKALFGGWEGNWMAYNAAHDVALPKSSGEKLG FFMYPIAENTEGRVDSTRRTISSTRSRPAKSWREWPFAGRPTSPVRENPGQTGSGNIGPVR >Mature_300_residues TQVWLPIPSVNADYQRSLENSFSSNGTTRLTQDGRDGVKMLYAEFPAAQGKPFVELTSRVQTQGRAVDWSQKTAAPEEAD TLRYFTRPTALIPTDGIVRKMALSATRGARTDVEKAQKLYDWIVANTYREPKIRGCGEGDIKTMLETGNLGGKCADLNAL FVGLCRSEVYLKGYGWAAMDPADVAKVMRLETANWIKNITDPVVAPVNKALFGGWEGNWMAYNAAHDVALPKSSGEKLGF FMYPIAENTEGRVDSTRRTISSTRSRPAKSWREWPFAGRPTSPVRENPGQTGSGNIGPVR
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002931 [H]
Pfam domain/function: PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 33188; Mature: 33057
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQVWLPIPSVNADYQRSLENSFSSNGTTRLTQDGRDGVKMLYAEFPAAQGKPFVELTSR CCEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHH VQTQGRAVDWSQKTAAPEEADTLRYFTRPTALIPTDGIVRKMALSATRGARTDVEKAQKL HHHCCCCCCCHHHCCCCCHHHHHHHHCCCCEECCCHHHHHHHHHHHCCCCHHHHHHHHHH YDWIVANTYREPKIRGCGEGDIKTMLETGNLGGKCADLNALFVGLCRSEVYLKGYGWAAM HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHCCEEEEECCCCCC DPADVAKVMRLETANWIKNITDPVVAPVNKALFGGWEGNWMAYNAAHDVALPKSSGEKLG CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEE FFMYPIAENTEGRVDSTRRTISSTRSRPAKSWREWPFAGRPTSPVRENPGQTGSGNIGPV EEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCC R C >Mature Secondary Structure TQVWLPIPSVNADYQRSLENSFSSNGTTRLTQDGRDGVKMLYAEFPAAQGKPFVELTSR CEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHH VQTQGRAVDWSQKTAAPEEADTLRYFTRPTALIPTDGIVRKMALSATRGARTDVEKAQKL HHHCCCCCCCHHHCCCCCHHHHHHHHCCCCEECCCHHHHHHHHHHHCCCCHHHHHHHHHH YDWIVANTYREPKIRGCGEGDIKTMLETGNLGGKCADLNALFVGLCRSEVYLKGYGWAAM HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHCCEEEEECCCCCC DPADVAKVMRLETANWIKNITDPVVAPVNKALFGGWEGNWMAYNAAHDVALPKSSGEKLG CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEE FFMYPIAENTEGRVDSTRRTISSTRSRPAKSWREWPFAGRPTSPVRENPGQTGSGNIGPV EEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]