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The map label for this gene is yphA [H]

Identifier: 91788760

GI number: 91788760

Start: 3060664

End: 3061074

Strand: Reverse

Name: yphA [H]

Synonym: Bpro_2900

Alternate gene names: 91788760

Gene position: 3061074-3060664 (Counterclockwise)

Preceding gene: 91788761

Following gene: 91788759

Centisome position: 58.86

GC content: 61.8

Gene sequence:

>411_bases
ATGTTTGCATCTCTCCAAAATCCCCTGTCGCTGATTGGCCGCGTCTTGCTGGCGTTGCTGTTTGTGCCTGCGGGTTTCAG
CAAGGTTGGCGGCTTTGCCGGCACCACCGGTTACATCGCATCCCAGGGCGTTCCATTTCCTGAACTGGCCACTGCGGCCG
CGATTGGTGTCGAGCTGGGCCTGGGGCTGCTGCTGCTGGTCGGTCTGCAAACCCGCTGGGCAGCCTTGGGCATCGCCCTG
TTCACCGTCGTGATCACCTTTATCTTTCACAAGTACTGGGCGGTGCCGGCTGAGCAGGTCATGATGCAGCAGCAGGCCTT
CTTCAAGAACATTGCCGTGGTCGGTGGCCTGCTCACGGTGGCCGCATGGGGTGCCGGTGCCTGGAGCCTGGACGCCAAGC
GCGCAGACTAA

Upstream 100 bases:

>100_bases
CGACTGAAAGCCTAAAGGCAGGCTCAAATTAATAGTGCTTGCCTATCGTATTTTTTTAATCCATCATTTTTCTCGTTTGT
ATTTTTAATAAGGACTCATC

Downstream 100 bases:

>100_bases
TCGTGGGCCGCTGCCGCGGCAGGTGTGGAGCCCTGCCGCGGCGGTTGATGTTTCGGATTCTTCCTGATCTATTCTTCAGC
TTTCTTCAACGGAGACAAGA

Product: DoxX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MFASLQNPLSLIGRVLLALLFVPAGFSKVGGFAGTTGYIASQGVPFPELATAAAIGVELGLGLLLLVGLQTRWAALGIAL
FTVVITFIFHKYWAVPAEQVMMQQQAFFKNIAVVGGLLTVAAWGAGAWSLDAKRAD

Sequences:

>Translated_136_residues
MFASLQNPLSLIGRVLLALLFVPAGFSKVGGFAGTTGYIASQGVPFPELATAAAIGVELGLGLLLLVGLQTRWAALGIAL
FTVVITFIFHKYWAVPAEQVMMQQQAFFKNIAVVGGLLTVAAWGAGAWSLDAKRAD
>Mature_136_residues
MFASLQNPLSLIGRVLLALLFVPAGFSKVGGFAGTTGYIASQGVPFPELATAAAIGVELGLGLLLLVGLQTRWAALGIAL
FTVVITFIFHKYWAVPAEQVMMQQQAFFKNIAVVGGLLTVAAWGAGAWSLDAKRAD

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI145693171, Length=132, Percent_Identity=35.6060606060606, Blast_Score=78, Evalue=2e-16,
Organism=Escherichia coli, GI87082210, Length=128, Percent_Identity=37.5, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14265; Mature: 14265

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFASLQNPLSLIGRVLLALLFVPAGFSKVGGFAGTTGYIASQGVPFPELATAAAIGVELG
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH
LGLLLLVGLQTRWAALGIALFTVVITFIFHKYWAVPAEQVMMQQQAFFKNIAVVGGLLTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAWGAGAWSLDAKRAD
HHHCCCCCCCCCCCCC
>Mature Secondary Structure
MFASLQNPLSLIGRVLLALLFVPAGFSKVGGFAGTTGYIASQGVPFPELATAAAIGVELG
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH
LGLLLLVGLQTRWAALGIALFTVVITFIFHKYWAVPAEQVMMQQQAFFKNIAVVGGLLTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAWGAGAWSLDAKRAD
HHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]