Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is wrbA [H]
Identifier: 91788759
GI number: 91788759
Start: 3060009
End: 3060563
Strand: Reverse
Name: wrbA [H]
Synonym: Bpro_2899
Alternate gene names: 91788759
Gene position: 3060563-3060009 (Counterclockwise)
Preceding gene: 91788760
Following gene: 91788758
Centisome position: 58.85
GC content: 62.16
Gene sequence:
>555_bases ATGCCGAAAGTCGTAGTGCTCTACCACTCCGGGTATGGCCATACCCAGCGCATGGCGCAATCGGTGGCGCAAGGCGCTGG GGCCGAGCTCCTGGCCATTGACGCCGATGGCAACCTGCCCGACGGCGGCTGGGAAACGCTCAATGCGGCAGACGCCATCA TCATGGGCTCTCCCACCTACATGGGAAGCGTGAGCTGGCAGTTCAAGAAGTTCGCCGACGCTTCTTCAAAGCCCTGGTAC ACGCAGGCCTGGAAAGACAAGCTGTTTGCCGGCTTCACCAACAGCGCGGCACTCGATGGCGACAAGATGTCGACGCTCAA TTACCTTTTTACCCTGGCCATGCAGCATGGGGGTATCTGGGTCAGCCAGGGCGTCTTGCCCAGCACCAGCAAGGCCGCGC AGCGTGATGATGCCAATTACCTGGGCTCCTACCGCGGTGCCATCGCCCAGTCGCCGTCGGATGCGGGTGCCGGCGAAATG TTTCCAGGCGACCTGGAGACGGCCCGGAGCCTGGGTGAACGTGTGGCCGAGGTGGCGGGAAAGTTTCAGCGTTAA
Upstream 100 bases:
>100_bases TCGTGGGCCGCTGCCGCGGCAGGTGTGGAGCCCTGCCGCGGCGGTTGATGTTTCGGATTCTTCCTGATCTATTCTTCAGC TTTCTTCAACGGAGACAAGA
Downstream 100 bases:
>100_bases AGTCAGGTACGCACCACCTTATTTCCCGTTTACCTTTCATTCGCACAGGAATTCTTCATGTCCATCGAACTGCACCGCGA CCGCTCGGCGGCAATGGCCC
Product: putative flavodoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MPKVVVLYHSGYGHTQRMAQSVAQGAGAELLAIDADGNLPDGGWETLNAADAIIMGSPTYMGSVSWQFKKFADASSKPWY TQAWKDKLFAGFTNSAALDGDKMSTLNYLFTLAMQHGGIWVSQGVLPSTSKAAQRDDANYLGSYRGAIAQSPSDAGAGEM FPGDLETARSLGERVAEVAGKFQR
Sequences:
>Translated_184_residues MPKVVVLYHSGYGHTQRMAQSVAQGAGAELLAIDADGNLPDGGWETLNAADAIIMGSPTYMGSVSWQFKKFADASSKPWY TQAWKDKLFAGFTNSAALDGDKMSTLNYLFTLAMQHGGIWVSQGVLPSTSKAAQRDDANYLGSYRGAIAQSPSDAGAGEM FPGDLETARSLGERVAEVAGKFQR >Mature_183_residues PKVVVLYHSGYGHTQRMAQSVAQGAGAELLAIDADGNLPDGGWETLNAADAIIMGSPTYMGSVSWQFKKFADASSKPWYT QAWKDKLFAGFTNSAALDGDKMSTLNYLFTLAMQHGGIWVSQGVLPSTSKAAQRDDANYLGSYRGAIAQSPSDAGAGEMF PGDLETARSLGERVAEVAGKFQR
Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1787239, Length=203, Percent_Identity=31.0344827586207, Blast_Score=64, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR010089 - InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 19621; Mature: 19490
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKVVVLYHSGYGHTQRMAQSVAQGAGAELLAIDADGNLPDGGWETLNAADAIIMGSPTY CCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHCCCCEEEECCCCC MGSVSWQFKKFADASSKPWYTQAWKDKLFAGFTNSAALDGDKMSTLNYLFTLAMQHGGIW CCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE VSQGVLPSTSKAAQRDDANYLGSYRGAIAQSPSDAGAGEMFPGDLETARSLGERVAEVAG EECCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KFQR HCCC >Mature Secondary Structure PKVVVLYHSGYGHTQRMAQSVAQGAGAELLAIDADGNLPDGGWETLNAADAIIMGSPTY CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHCCCCEEEECCCCC MGSVSWQFKKFADASSKPWYTQAWKDKLFAGFTNSAALDGDKMSTLNYLFTLAMQHGGIW CCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE VSQGVLPSTSKAAQRDDANYLGSYRGAIAQSPSDAGAGEMFPGDLETARSLGERVAEVAG EECCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KFQR HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA