Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788373
Identifier: 91788373
GI number: 91788373
Start: 2624150
End: 2624479
Strand: Direct
Name: 91788373
Synonym: Bpro_2510
Alternate gene names: NA
Gene position: 2624150-2624479 (Clockwise)
Preceding gene: 91788372
Following gene: 91788374
Centisome position: 50.46
GC content: 62.73
Gene sequence:
>330_bases ATGAATGGGCACAACGAAATCACGATCGAAGAAGGCGGCGCCAATGTCTATGCCGACCTGGGTTATACCGACGCTGCGGA AATGCAGCGAAAATCCCAGCTCGCCGGCGAGATCGCCCGCGCGATCAAGGCGCGTCGCCTGACGCAAGAAGATGCGGCGA CGCTGCTGGGCATTGATCAATCCAAGGTCTCGCGCATCACGCGCGGCCAATTCCGCGGCGTCAGCGAAGCCAAGCTACTG GAGCTGGTGGCCAGGCTGGGGCACGATGTAAAGATCGTGGTCGGCCCGGTGCGGCGGCGCGCCGGCAAGATCGAGCTGCA GTTTGCCTGA
Upstream 100 bases:
>100_bases GCATCGCCACGCCGAAGCCGGACATGGACGTGATCAATATCCGCCTGAAAGCCGCGAAGCAGGATTTCGAAGCATGGCAG GCACAGCAAGGAGCACGCAA
Downstream 100 bases:
>100_bases ACTCGCCCTGCAGCGCCAGGCGCAACCAAACTTGCGGCACTCTCGCCTGTCAGCTGTCGCTCGCATATGGACCAGCGGGC GCCTGACGACAGTGACATGA
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Xin-Antitoxin System Antitoxin Component Xre Family; HTH Domain-Containing Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Xre-Family Transcriptional Regulator; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MNGHNEITIEEGGANVYADLGYTDAAEMQRKSQLAGEIARAIKARRLTQEDAATLLGIDQSKVSRITRGQFRGVSEAKLL ELVARLGHDVKIVVGPVRRRAGKIELQFA
Sequences:
>Translated_109_residues MNGHNEITIEEGGANVYADLGYTDAAEMQRKSQLAGEIARAIKARRLTQEDAATLLGIDQSKVSRITRGQFRGVSEAKLL ELVARLGHDVKIVVGPVRRRAGKIELQFA >Mature_109_residues MNGHNEITIEEGGANVYADLGYTDAAEMQRKSQLAGEIARAIKARRLTQEDAATLLGIDQSKVSRITRGQFRGVSEAKLL ELVARLGHDVKIVVGPVRRRAGKIELQFA
Specific function: Unknown
COG id: COG5606
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11915; Mature: 11915
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGHNEITIEEGGANVYADLGYTDAAEMQRKSQLAGEIARAIKARRLTQEDAATLLGIDQ CCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCH SKVSRITRGQFRGVSEAKLLELVARLGHDVKIVVGPVRRRAGKIELQFA HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEC >Mature Secondary Structure MNGHNEITIEEGGANVYADLGYTDAAEMQRKSQLAGEIARAIKARRLTQEDAATLLGIDQ CCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCH SKVSRITRGQFRGVSEAKLLELVARLGHDVKIVVGPVRRRAGKIELQFA HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA