Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788373

Identifier: 91788373

GI number: 91788373

Start: 2624150

End: 2624479

Strand: Direct

Name: 91788373

Synonym: Bpro_2510

Alternate gene names: NA

Gene position: 2624150-2624479 (Clockwise)

Preceding gene: 91788372

Following gene: 91788374

Centisome position: 50.46

GC content: 62.73

Gene sequence:

>330_bases
ATGAATGGGCACAACGAAATCACGATCGAAGAAGGCGGCGCCAATGTCTATGCCGACCTGGGTTATACCGACGCTGCGGA
AATGCAGCGAAAATCCCAGCTCGCCGGCGAGATCGCCCGCGCGATCAAGGCGCGTCGCCTGACGCAAGAAGATGCGGCGA
CGCTGCTGGGCATTGATCAATCCAAGGTCTCGCGCATCACGCGCGGCCAATTCCGCGGCGTCAGCGAAGCCAAGCTACTG
GAGCTGGTGGCCAGGCTGGGGCACGATGTAAAGATCGTGGTCGGCCCGGTGCGGCGGCGCGCCGGCAAGATCGAGCTGCA
GTTTGCCTGA

Upstream 100 bases:

>100_bases
GCATCGCCACGCCGAAGCCGGACATGGACGTGATCAATATCCGCCTGAAAGCCGCGAAGCAGGATTTCGAAGCATGGCAG
GCACAGCAAGGAGCACGCAA

Downstream 100 bases:

>100_bases
ACTCGCCCTGCAGCGCCAGGCGCAACCAAACTTGCGGCACTCTCGCCTGTCAGCTGTCGCTCGCATATGGACCAGCGGGC
GCCTGACGACAGTGACATGA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Xin-Antitoxin System Antitoxin Component Xre Family; HTH Domain-Containing Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Xre-Family Transcriptional Regulator; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MNGHNEITIEEGGANVYADLGYTDAAEMQRKSQLAGEIARAIKARRLTQEDAATLLGIDQSKVSRITRGQFRGVSEAKLL
ELVARLGHDVKIVVGPVRRRAGKIELQFA

Sequences:

>Translated_109_residues
MNGHNEITIEEGGANVYADLGYTDAAEMQRKSQLAGEIARAIKARRLTQEDAATLLGIDQSKVSRITRGQFRGVSEAKLL
ELVARLGHDVKIVVGPVRRRAGKIELQFA
>Mature_109_residues
MNGHNEITIEEGGANVYADLGYTDAAEMQRKSQLAGEIARAIKARRLTQEDAATLLGIDQSKVSRITRGQFRGVSEAKLL
ELVARLGHDVKIVVGPVRRRAGKIELQFA

Specific function: Unknown

COG id: COG5606

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11915; Mature: 11915

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGHNEITIEEGGANVYADLGYTDAAEMQRKSQLAGEIARAIKARRLTQEDAATLLGIDQ
CCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCH
SKVSRITRGQFRGVSEAKLLELVARLGHDVKIVVGPVRRRAGKIELQFA
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEC
>Mature Secondary Structure
MNGHNEITIEEGGANVYADLGYTDAAEMQRKSQLAGEIARAIKARRLTQEDAATLLGIDQ
CCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCH
SKVSRITRGQFRGVSEAKLLELVARLGHDVKIVVGPVRRRAGKIELQFA
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA