Click here to switch to the map view.

The map label for this gene is xerD [H]

Identifier: 91788374

GI number: 91788374

Start: 2624546

End: 2625892

Strand: Direct

Name: xerD [H]

Synonym: Bpro_2511

Alternate gene names: 91788374

Gene position: 2624546-2625892 (Clockwise)

Preceding gene: 91788373

Following gene: 91788375

Centisome position: 50.47

GC content: 64.29

Gene sequence:

>1347_bases
ATGGACCAGCGGGCGCCTGACGACAGTGACATGACGCGTCTTGCCCAATACATCGAGGCCTCCGAGCGCGACAACACGCG
TCGGAGCTACGCTTCTGCCATACGCCATTTTGAAATAGAGTGGAAAGGCCTGCTGCCTTCTACCGCCGATGCCATCGCCC
GCTACCTGGCCGACCACGCGCCCACCTTGGCCATCAACACACTGCGCCAGCGCCTGGCGGCGCTGTCCCGCTGGCATAGC
GACCAAGGTTTTCCTGATCCCACCAAGTCACCCCTGGTGCGCCAGGTCCTCAAAGGCATTCGCTCGATTCACGCTGTGCC
AGAAAAGCGCGCACGCCCCCTGGAACTGGCGGTACTCCAGCAGATCGATCAGTGGCTCGATGCCGCCATTAGCAACGCTC
AGCGGATCGGCGACCGGCCGGCTTTGCTGCGCCACACGCGCGACCGCAGCCTGATGCTGCTGGGATTTTGGCGCGGCTTT
CGCTCCGACGAACTGGTCAACCTGCACGTTGAAAACACCGAAGTCACCCCCGGCCAGGGCATGGCCTGCTACCTGGGCCG
CAGCAAAGGCGACAGGCAGCTGCAGGGCCGAACCTTCCAATGCCCGGCTTTGTCCCGCCTGTGCGCTGTGGACGCCTTTA
GTGCCTGGGTCAGCCTGGCCGGTTTGACCGAGGGTCCGGTGTTCCGCAAGATCGACCGCTGGGGGAATGTGGCCGACGAA
AGTCTGCATGCCAACAGCCTGATCCCCTTGCTGCGCAGCCTGTTCGCCGAGGCCGGCGTCGAGGCACCCGAGGAATACAG
CAGCCATTCCATGCGCCGCGGCTTTGCCGGCTGGGCCCGCGCCAGCGGCTGGGATATCAAGGAGCTGATGGAATACGTCG
GCTGGAAGGACGTCAAATCGGCCATGCGCTACCTGGATGCGTCGGATTCCAGTCTGCAAGCCCGCTTCGAGCAGGGATTG
CCTGCTCTGGCGCCGGCAGTTCCGCAGCCACCACCACCTTTGCTGTTGCTGACCGAACAGGCCGAAGTTCCCCGCCCGCT
GGCCGAGGGAGCGACGCCCGTGGCGGTCCTGCGCGTCACGATGGTGCTGGCCCGCTTCAGCAAGCAGTCACGCGGCCTGG
CCCGCGGCCACCGGCTGATCGAGCAGACCTGCTTCGAGCGTTTTGCCATGCAACGCCTGAACACCGAGGGCACGCTCTAC
GAGCTGGCGATTCCCTACCTGTCCCGCGACTTGCTGGACGAGGTGATCGCCACGCTGCTGGATGACATGTACCGCATCGC
CGAGGACAACCAGTGCCTGCTGGAAACCTCGTTTCACGAGCCCGCCACTGATTCACACTGGGATTGA

Upstream 100 bases:

>100_bases
GCGCGCCGGCAAGATCGAGCTGCAGTTTGCCTGAACTCGCCCTGCAGCGCCAGGCGCAACCAAACTTGCGGCACTCTCGC
CTGTCAGCTGTCGCTCGCAT

Downstream 100 bases:

>100_bases
GGCCATGGGCAGCCAGGTGGGGTTGCATGAGCCGGCCTATCCCTGCTTGAAGCCCGATCCCAGAGTGCCCGGCCGCCTCG
CCCGAAACTCCAGTAGAGTT

Product: phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MDQRAPDDSDMTRLAQYIEASERDNTRRSYASAIRHFEIEWKGLLPSTADAIARYLADHAPTLAINTLRQRLAALSRWHS
DQGFPDPTKSPLVRQVLKGIRSIHAVPEKRARPLELAVLQQIDQWLDAAISNAQRIGDRPALLRHTRDRSLMLLGFWRGF
RSDELVNLHVENTEVTPGQGMACYLGRSKGDRQLQGRTFQCPALSRLCAVDAFSAWVSLAGLTEGPVFRKIDRWGNVADE
SLHANSLIPLLRSLFAEAGVEAPEEYSSHSMRRGFAGWARASGWDIKELMEYVGWKDVKSAMRYLDASDSSLQARFEQGL
PALAPAVPQPPPPLLLLTEQAEVPRPLAEGATPVAVLRVTMVLARFSKQSRGLARGHRLIEQTCFERFAMQRLNTEGTLY
ELAIPYLSRDLLDEVIATLLDDMYRIAEDNQCLLETSFHEPATDSHWD

Sequences:

>Translated_448_residues
MDQRAPDDSDMTRLAQYIEASERDNTRRSYASAIRHFEIEWKGLLPSTADAIARYLADHAPTLAINTLRQRLAALSRWHS
DQGFPDPTKSPLVRQVLKGIRSIHAVPEKRARPLELAVLQQIDQWLDAAISNAQRIGDRPALLRHTRDRSLMLLGFWRGF
RSDELVNLHVENTEVTPGQGMACYLGRSKGDRQLQGRTFQCPALSRLCAVDAFSAWVSLAGLTEGPVFRKIDRWGNVADE
SLHANSLIPLLRSLFAEAGVEAPEEYSSHSMRRGFAGWARASGWDIKELMEYVGWKDVKSAMRYLDASDSSLQARFEQGL
PALAPAVPQPPPPLLLLTEQAEVPRPLAEGATPVAVLRVTMVLARFSKQSRGLARGHRLIEQTCFERFAMQRLNTEGTLY
ELAIPYLSRDLLDEVIATLLDDMYRIAEDNQCLLETSFHEPATDSHWD
>Mature_448_residues
MDQRAPDDSDMTRLAQYIEASERDNTRRSYASAIRHFEIEWKGLLPSTADAIARYLADHAPTLAINTLRQRLAALSRWHS
DQGFPDPTKSPLVRQVLKGIRSIHAVPEKRARPLELAVLQQIDQWLDAAISNAQRIGDRPALLRHTRDRSLMLLGFWRGF
RSDELVNLHVENTEVTPGQGMACYLGRSKGDRQLQGRTFQCPALSRLCAVDAFSAWVSLAGLTEGPVFRKIDRWGNVADE
SLHANSLIPLLRSLFAEAGVEAPEEYSSHSMRRGFAGWARASGWDIKELMEYVGWKDVKSAMRYLDASDSSLQARFEQGL
PALAPAVPQPPPPLLLLTEQAEVPRPLAEGATPVAVLRVTMVLARFSKQSRGLARGHRLIEQTCFERFAMQRLNTEGTLY
ELAIPYLSRDLLDEVIATLLDDMYRIAEDNQCLLETSFHEPATDSHWD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 50377; Mature: 50377

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQRAPDDSDMTRLAQYIEASERDNTRRSYASAIRHFEIEWKGLLPSTADAIARYLADHA
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHCC
PTLAINTLRQRLAALSRWHSDQGFPDPTKSPLVRQVLKGIRSIHAVPEKRARPLELAVLQ
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCHHHHHHH
QIDQWLDAAISNAQRIGDRPALLRHTRDRSLMLLGFWRGFRSDELVNLHVENTEVTPGQG
HHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEHHHCCCCCCCEEEEEEECCCCCCCCC
MACYLGRSKGDRQLQGRTFQCPALSRLCAVDAFSAWVSLAGLTEGPVFRKIDRWGNVADE
CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHH
SLHANSLIPLLRSLFAEAGVEAPEEYSSHSMRRGFAGWARASGWDIKELMEYVGWKDVKS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHH
AMRYLDASDSSLQARFEQGLPALAPAVPQPPPPLLLLTEQAEVPRPLAEGATPVAVLRVT
HHHHHCCCCHHHHHHHHCCCCHHCCCCCCCCCCEEEEECCCCCCCHHHCCCCHHHHHHHH
MVLARFSKQSRGLARGHRLIEQTCFERFAMQRLNTEGTLYELAIPYLSRDLLDEVIATLL
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
DDMYRIAEDNQCLLETSFHEPATDSHWD
HHHHHHHCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MDQRAPDDSDMTRLAQYIEASERDNTRRSYASAIRHFEIEWKGLLPSTADAIARYLADHA
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHCC
PTLAINTLRQRLAALSRWHSDQGFPDPTKSPLVRQVLKGIRSIHAVPEKRARPLELAVLQ
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCHHHHHHH
QIDQWLDAAISNAQRIGDRPALLRHTRDRSLMLLGFWRGFRSDELVNLHVENTEVTPGQG
HHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEHHHCCCCCCCEEEEEEECCCCCCCCC
MACYLGRSKGDRQLQGRTFQCPALSRLCAVDAFSAWVSLAGLTEGPVFRKIDRWGNVADE
CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHH
SLHANSLIPLLRSLFAEAGVEAPEEYSSHSMRRGFAGWARASGWDIKELMEYVGWKDVKS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHH
AMRYLDASDSSLQARFEQGLPALAPAVPQPPPPLLLLTEQAEVPRPLAEGATPVAVLRVT
HHHHHCCCCHHHHHHHHCCCCHHCCCCCCCCCCEEEEECCCCCCCHHHCCCCHHHHHHHH
MVLARFSKQSRGLARGHRLIEQTCFERFAMQRLNTEGTLYELAIPYLSRDLLDEVIATLL
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
DDMYRIAEDNQCLLETSFHEPATDSHWD
HHHHHHHCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11073919 [H]