Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91788372
Identifier: 91788372
GI number: 91788372
Start: 2623770
End: 2624153
Strand: Direct
Name: 91788372
Synonym: Bpro_2509
Alternate gene names: NA
Gene position: 2623770-2624153 (Clockwise)
Preceding gene: 91788371
Following gene: 91788373
Centisome position: 50.45
GC content: 58.07
Gene sequence:
>384_bases ATGTTGAAGCAAGCGCGCAAACCCATCAAATGGGTCGGTTCCACCAAGCGCGATCTGGATGCGATGCCGGAGGATGTCAA AGATGTCTTCGGTCATGCCATCGACCTGGCACAAGCCGGCGGCAAGCACCAGGATGCCAAGGTGATGACCGGCTTCGGCT CGGCCGGCGTGCTGGAGGTGGTCGAGGATCATCAGGGTGACACTTTTCGGGCCGTTTACACCGTCAAGTTCGCCGGGTGG GTTTATGTCCTGCACTGCTTCCAGAAGAAGTCCAAAAGCGGCATCGCCACGCCGAAGCCGGACATGGACGTGATCAATAT CCGCCTGAAAGCCGCGAAGCAGGATTTCGAAGCATGGCAGGCACAGCAAGGAGCACGCAAATGA
Upstream 100 bases:
>100_bases CTTCACGCGCATGCCGGCGCGTCCCCGCAGAAAATCCGCCGTCGCCATTTGGCCTTCAGAGAATTGACGGCGATATGTCT AAACGGGCATAATTGAGGTG
Downstream 100 bases:
>100_bases ATGGGCACAACGAAATCACGATCGAAGAAGGCGGCGCCAATGTCTATGCCGACCTGGGTTATACCGACGCTGCGGAAATG CAGCGAAAATCCCAGCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MLKQARKPIKWVGSTKRDLDAMPEDVKDVFGHAIDLAQAGGKHQDAKVMTGFGSAGVLEVVEDHQGDTFRAVYTVKFAGW VYVLHCFQKKSKSGIATPKPDMDVINIRLKAAKQDFEAWQAQQGARK
Sequences:
>Translated_127_residues MLKQARKPIKWVGSTKRDLDAMPEDVKDVFGHAIDLAQAGGKHQDAKVMTGFGSAGVLEVVEDHQGDTFRAVYTVKFAGW VYVLHCFQKKSKSGIATPKPDMDVINIRLKAAKQDFEAWQAQQGARK >Mature_127_residues MLKQARKPIKWVGSTKRDLDAMPEDVKDVFGHAIDLAQAGGKHQDAKVMTGFGSAGVLEVVEDHQGDTFRAVYTVKFAGW VYVLHCFQKKSKSGIATPKPDMDVINIRLKAAKQDFEAWQAQQGARK
Specific function: Unknown
COG id: COG4679
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14086; Mature: 14086
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKQARKPIKWVGSTKRDLDAMPEDVKDVFGHAIDLAQAGGKHQDAKVMTGFGSAGVLEV CCCCCCCCHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHH VEDHQGDTFRAVYTVKFAGWVYVLHCFQKKSKSGIATPKPDMDVINIRLKAAKQDFEAWQ HHCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHH AQQGARK HHCCCCC >Mature Secondary Structure MLKQARKPIKWVGSTKRDLDAMPEDVKDVFGHAIDLAQAGGKHQDAKVMTGFGSAGVLEV CCCCCCCCHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHH VEDHQGDTFRAVYTVKFAGWVYVLHCFQKKSKSGIATPKPDMDVINIRLKAAKQDFEAWQ HHCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHH AQQGARK HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA