Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is recR [H]

Identifier: 91788141

GI number: 91788141

Start: 2362653

End: 2363279

Strand: Direct

Name: recR [H]

Synonym: Bpro_2270

Alternate gene names: 91788141

Gene position: 2362653-2363279 (Clockwise)

Preceding gene: 91788140

Following gene: 91788142

Centisome position: 45.43

GC content: 65.71

Gene sequence:

>627_bases
ATGGCTGACTCCAATGCCCTCGAAGGCCTGACCCAGGCGTTGCGCAAGCTGCCGGGGGTGGGGGTCAAGTCGGCTGCGCG
CATGGCTTTTCATCTGCTGCAGCACGACAAGCCCGGCGCCCTGCAGATCGCGCGGGCCCTGGAGCATGCGGTGAACAGCG
TCAGGCATTGCACCCTGTGCAACACACTGACCGAGCAGGAGGTTTGCGCCACCTGCGCCAATCCGCAACGCGACCGAAGC
AAGCTGTGTGTGGTGGAAACCCCCGCGGACCAGGCAGCACTGGAGCGTACGCTGGCCTACAGGGGTCTTTACTTCGTGCT
CATGGGCAAGCTCAGCCCGCTGGACGGCATTGGCCCCAACGACATCGGCCTGCAAAAACTGTTTGACCGGGTCGTACCCC
GGGACGAGCATGGCGAGCCGCTGCCGCCGGCCTCGCGTGAGGTGCAGGAGGTCATCCTGGCCACCAACTTCACCGCCGAG
GGGGAGGCCACGGCGCACGTGATTGCCCAGGCGCTGAAAAGCCGCGGCGTGCAGGTAACGCGCCTGGCCCGAGGCGTTCC
CGTAGGCAGTGAACTGGAATACGTGGATTTGGGCACGATTGCCCACGCGCTGGTGGACCGCCGATGA

Upstream 100 bases:

>100_bases
TTTCCATTCTGATCGCCACCGTTCTGGCTGAGGCTGCCATTGCAGGCATGTAGCCGGGTATTCCTGCAAACCCAACACCC
ACGGCGGACGCGCATTTTCA

Downstream 100 bases:

>100_bases
CGGCGGCGATACTTGCAGCTTAAAGCGCGGGCAGGCAAGCCGCTATCATTTTCATAGCCTGCGGGATGCATTGAATAAAA
GCTGGGCGAAAGCCGGGAAA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MADSNALEGLTQALRKLPGVGVKSAARMAFHLLQHDKPGALQIARALEHAVNSVRHCTLCNTLTEQEVCATCANPQRDRS
KLCVVETPADQAALERTLAYRGLYFVLMGKLSPLDGIGPNDIGLQKLFDRVVPRDEHGEPLPPASREVQEVILATNFTAE
GEATAHVIAQALKSRGVQVTRLARGVPVGSELEYVDLGTIAHALVDRR

Sequences:

>Translated_208_residues
MADSNALEGLTQALRKLPGVGVKSAARMAFHLLQHDKPGALQIARALEHAVNSVRHCTLCNTLTEQEVCATCANPQRDRS
KLCVVETPADQAALERTLAYRGLYFVLMGKLSPLDGIGPNDIGLQKLFDRVVPRDEHGEPLPPASREVQEVILATNFTAE
GEATAHVIAQALKSRGVQVTRLARGVPVGSELEYVDLGTIAHALVDRR
>Mature_207_residues
ADSNALEGLTQALRKLPGVGVKSAARMAFHLLQHDKPGALQIARALEHAVNSVRHCTLCNTLTEQEVCATCANPQRDRSK
LCVVETPADQAALERTLAYRGLYFVLMGKLSPLDGIGPNDIGLQKLFDRVVPRDEHGEPLPPASREVQEVILATNFTAEG
EATAHVIAQALKSRGVQVTRLARGVPVGSELEYVDLGTIAHALVDRR

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=208, Percent_Identity=51.9230769230769, Blast_Score=201, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 22473; Mature: 22342

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSNALEGLTQALRKLPGVGVKSAARMAFHLLQHDKPGALQIARALEHAVNSVRHCTLC
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
NTLTEQEVCATCANPQRDRSKLCVVETPADQAALERTLAYRGLYFVLMGKLSPLDGIGPN
HHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DIGLQKLFDRVVPRDEHGEPLPPASREVQEVILATNFTAEGEATAHVIAQALKSRGVQVT
CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEH
RLARGVPVGSELEYVDLGTIAHALVDRR
HHHHCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADSNALEGLTQALRKLPGVGVKSAARMAFHLLQHDKPGALQIARALEHAVNSVRHCTLC
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
NTLTEQEVCATCANPQRDRSKLCVVETPADQAALERTLAYRGLYFVLMGKLSPLDGIGPN
HHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DIGLQKLFDRVVPRDEHGEPLPPASREVQEVILATNFTAEGEATAHVIAQALKSRGVQVT
CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEH
RLARGVPVGSELEYVDLGTIAHALVDRR
HHHHCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA