Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788142
Identifier: 91788142
GI number: 91788142
Start: 2363350
End: 2363829
Strand: Direct
Name: 91788142
Synonym: Bpro_2271
Alternate gene names: NA
Gene position: 2363350-2363829 (Clockwise)
Preceding gene: 91788141
Following gene: 91788143
Centisome position: 45.45
GC content: 57.08
Gene sequence:
>480_bases TTGAATAAAAGCTGGGCGAAAGCCGGGAAAAAGCTGAGCCAAAAAAAACTGGACGAGGGATTCATCATGACGTTTGCACG TTTCACCATTGCCTACTGGTGTGTTCTGATCGCGGCCCTGTTGCCATTGGCCTGCGCCGGACTCGCGAAGTACGGCATGA TGACGACGCCCAGACGCCAGGGTGGCTATGACAACAACAACCCGCGCGGCTGGCTGGCCCGGCAGACTGATTGGCGCGGC AGGGCCAACGCAGCACAAGCCAACACCTTTGAGGCTCTGCCCTTCTTCTTTGCGGCGGTCATCATTGCGCACCTGTTGCA GGCCGGGCAGACAAGCCTGGATATTCTGGCCCTGCTGTTCATCGTGCTGCGTATCGCCTACATCATGATGTACATCGCCG ATTTGGCCCAGGCCCGCTCTGCGATCTGGGCCCTGGCGATGCTGGTCAATATTGGAATTCTTTTTTCCGGCTATCGATGA
Upstream 100 bases:
>100_bases ATTGCCCACGCGCTGGTGGACCGCCGATGACGGCGGCGATACTTGCAGCTTAAAGCGCGGGCAGGCAAGCCGCTATCATT TTCATAGCCTGCGGGATGCA
Downstream 100 bases:
>100_bases AACCAGGCGCGTCCGGCGCGCCGGACCTGTTCTGCCGGGCCATGGGCTGGTAACCACTGGTAACCGTGAGTCGCCGTTCG GTAAAAACCCGCACGGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MNKSWAKAGKKLSQKKLDEGFIMTFARFTIAYWCVLIAALLPLACAGLAKYGMMTTPRRQGGYDNNNPRGWLARQTDWRG RANAAQANTFEALPFFFAAVIIAHLLQAGQTSLDILALLFIVLRIAYIMMYIADLAQARSAIWALAMLVNIGILFSGYR
Sequences:
>Translated_159_residues MNKSWAKAGKKLSQKKLDEGFIMTFARFTIAYWCVLIAALLPLACAGLAKYGMMTTPRRQGGYDNNNPRGWLARQTDWRG RANAAQANTFEALPFFFAAVIIAHLLQAGQTSLDILALLFIVLRIAYIMMYIADLAQARSAIWALAMLVNIGILFSGYR >Mature_159_residues MNKSWAKAGKKLSQKKLDEGFIMTFARFTIAYWCVLIAALLPLACAGLAKYGMMTTPRRQGGYDNNNPRGWLARQTDWRG RANAAQANTFEALPFFFAAVIIAHLLQAGQTSLDILALLFIVLRIAYIMMYIADLAQARSAIWALAMLVNIGILFSGYR
Specific function: Unknown
COG id: COG3686
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17712; Mature: 17712
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSWAKAGKKLSQKKLDEGFIMTFARFTIAYWCVLIAALLPLACAGLAKYGMMTTPRRQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GGYDNNNPRGWLARQTDWRGRANAAQANTFEALPFFFAAVIIAHLLQAGQTSLDILALLF CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH IVLRIAYIMMYIADLAQARSAIWALAMLVNIGILFSGYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKSWAKAGKKLSQKKLDEGFIMTFARFTIAYWCVLIAALLPLACAGLAKYGMMTTPRRQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GGYDNNNPRGWLARQTDWRGRANAAQANTFEALPFFFAAVIIAHLLQAGQTSLDILALLF CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH IVLRIAYIMMYIADLAQARSAIWALAMLVNIGILFSGYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA