Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is phoR [H]
Identifier: 91788129
GI number: 91788129
Start: 2344495
End: 2345850
Strand: Direct
Name: phoR [H]
Synonym: Bpro_2258
Alternate gene names: 91788129
Gene position: 2344495-2345850 (Clockwise)
Preceding gene: 91788128
Following gene: 91788135
Centisome position: 45.08
GC content: 63.57
Gene sequence:
>1356_bases ATGATCAACCGCTGGATCGCTTTTACCGCCTGCATGTTGGCCGGTGGCGCATTGGGATGGTTGACGACTGCGAAGGGTGG ACCCGCATGGAGCCTGGGTGTGGGTCTTGGACTGGGCGCCTTGATATGGCTGATGATCGACAGCCTCTACCTGGCCCGGC TCCTCCGGTGGCTGCGCGCCGAGCAGGGCCGCGAAGCGCCGGCCATGGTGTCCAGCCAGCTACCCCGCTTGCCCGGTGTA TGGGAGGAAGTGGTCGACCGGACCCGCAGGCTGCTGAAGAACCGCGACCAGCAGTTGCAGGAAAGCCAGGCACGACTGGA CGAGTTTCTGGCGGCCATGCAGGCTTCCCCGAGCGGGGTGGTGCTGCTGGATACGCAGGGGCGCATCGAGTGGTGCAATC AGATGGCGACCCAGCATTTTGGTTTTGACGTGCAGCGCGATGTGATGCAGCATATTGCCAACCTGGTTCGCGAGCCTGCC TTCAAGGCCTACCTGGCGTCGGGTAACTATTCGCATGACGTGGTGATTCCCGGCAGCCTCAGCACACCGGCGCGACCCGT CAAGTTGTCAGTGCATGTGCATTCGTATGGCAAAGACCGCAAGTTGCTGCTGTCGCGGGACATCACCGCCGTCGAGCTGG CGGAAGCCATGCGCCGGGATTTTGTGGCCAATGTGTCGCATGAGATCCGTACGCCGCTGACGGTGTTGTCCGGCTTCATC GAGACGCTGCGAACCCTGCCTTTGGAGGAGCCCGAGCGCGCACGTTACCTGGCGCTGATGGCGCAGCAATCCCAGCGCAT GCAGACGCTGGTGAATGACTTGCTGACACTGTCACGCCTGGAGGGAAGCCCGTTCCCCGGCGCCAATGACTGGATCACCA CCAGTGCGCTGCTGGTGCAGTGCGAGCAGGAGGCCCGGGCCTTGTCGGCTGTGATTGCGCCGCGCGGGCATCGGCTGGAG TTTGACGCCGGGCCGGCCAGCGAAATCGCAGGCGTGCAAACGGAGCTGTACAGCGCCATGTCCAACCTGGTGACCAATGC GGTCCGCTATACACCGGAGACGGGCCTGGTCAGCGTCAGCTGGAAGCTGCTCAAGGATGGCCGCGGCCAGTTTGAGGTCA GGGACACCGGACCGGGTATAGAGCCCGAACATTTGCCTCGCCTGACGGAGCGCTTTTATCGCATTGACCGCAGTCGCTCG CGTGAAACTGGCGGAACGGGTTTGGGCCTGGCCATCGTCAAGCATGTCGCCCAGCGCCACGGTGCCGAACTGCATATCGA CAGCCAGCCCGGGCACGGTTCGCGCTTTTCACTCATTTTCCCCGCGGCACGCATCCGCCCGGCTCACGCTGCCTGA
Upstream 100 bases:
>100_bases CCGCCGGTACCATGGTTGAAACCGTTCGCGGGGCGGGTTACCGTCTGACTGCTGCGGCTGCCGCTACCACTCGGGTAACT GCTGCGGCACAATCCGGCAC
Downstream 100 bases:
>100_bases GTTTTCCCCGGGATGGCCCGCTGGCTCTGCCAAACCACGCGCCACAGCAACCCCAGGAGGCAGGCGGCTGCCAGTCCGAT CGCGATGGTGCTGGCAGCCC
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MINRWIAFTACMLAGGALGWLTTAKGGPAWSLGVGLGLGALIWLMIDSLYLARLLRWLRAEQGREAPAMVSSQLPRLPGV WEEVVDRTRRLLKNRDQQLQESQARLDEFLAAMQASPSGVVLLDTQGRIEWCNQMATQHFGFDVQRDVMQHIANLVREPA FKAYLASGNYSHDVVIPGSLSTPARPVKLSVHVHSYGKDRKLLLSRDITAVELAEAMRRDFVANVSHEIRTPLTVLSGFI ETLRTLPLEEPERARYLALMAQQSQRMQTLVNDLLTLSRLEGSPFPGANDWITTSALLVQCEQEARALSAVIAPRGHRLE FDAGPASEIAGVQTELYSAMSNLVTNAVRYTPETGLVSVSWKLLKDGRGQFEVRDTGPGIEPEHLPRLTERFYRIDRSRS RETGGTGLGLAIVKHVAQRHGAELHIDSQPGHGSRFSLIFPAARIRPAHAA
Sequences:
>Translated_451_residues MINRWIAFTACMLAGGALGWLTTAKGGPAWSLGVGLGLGALIWLMIDSLYLARLLRWLRAEQGREAPAMVSSQLPRLPGV WEEVVDRTRRLLKNRDQQLQESQARLDEFLAAMQASPSGVVLLDTQGRIEWCNQMATQHFGFDVQRDVMQHIANLVREPA FKAYLASGNYSHDVVIPGSLSTPARPVKLSVHVHSYGKDRKLLLSRDITAVELAEAMRRDFVANVSHEIRTPLTVLSGFI ETLRTLPLEEPERARYLALMAQQSQRMQTLVNDLLTLSRLEGSPFPGANDWITTSALLVQCEQEARALSAVIAPRGHRLE FDAGPASEIAGVQTELYSAMSNLVTNAVRYTPETGLVSVSWKLLKDGRGQFEVRDTGPGIEPEHLPRLTERFYRIDRSRS RETGGTGLGLAIVKHVAQRHGAELHIDSQPGHGSRFSLIFPAARIRPAHAA >Mature_451_residues MINRWIAFTACMLAGGALGWLTTAKGGPAWSLGVGLGLGALIWLMIDSLYLARLLRWLRAEQGREAPAMVSSQLPRLPGV WEEVVDRTRRLLKNRDQQLQESQARLDEFLAAMQASPSGVVLLDTQGRIEWCNQMATQHFGFDVQRDVMQHIANLVREPA FKAYLASGNYSHDVVIPGSLSTPARPVKLSVHVHSYGKDRKLLLSRDITAVELAEAMRRDFVANVSHEIRTPLTVLSGFI ETLRTLPLEEPERARYLALMAQQSQRMQTLVNDLLTLSRLEGSPFPGANDWITTSALLVQCEQEARALSAVIAPRGHRLE FDAGPASEIAGVQTELYSAMSNLVTNAVRYTPETGLVSVSWKLLKDGRGQFEVRDTGPGIEPEHLPRLTERFYRIDRSRS RETGGTGLGLAIVKHVAQRHGAELHIDSQPGHGSRFSLIFPAARIRPAHAA
Specific function: Member of the two-component regulatory system phoR/phoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates phoB in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=425, Percent_Identity=38.3529411764706, Blast_Score=265, Evalue=4e-72, Organism=Escherichia coli, GI1786783, Length=247, Percent_Identity=33.1983805668016, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI1788393, Length=237, Percent_Identity=30.8016877637131, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790346, Length=234, Percent_Identity=32.9059829059829, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1789149, Length=257, Percent_Identity=31.1284046692607, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1787894, Length=232, Percent_Identity=31.0344827586207, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI48994928, Length=254, Percent_Identity=27.5590551181102, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1788713, Length=235, Percent_Identity=25.531914893617, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1788549, Length=395, Percent_Identity=23.5443037974684, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI145693157, Length=243, Percent_Identity=30.4526748971193, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1789403, Length=217, Percent_Identity=31.3364055299539, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1790861, Length=211, Percent_Identity=31.7535545023697, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87081816, Length=236, Percent_Identity=31.3559322033898, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1790436, Length=287, Percent_Identity=26.8292682926829, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1786912, Length=233, Percent_Identity=29.1845493562232, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1790300, Length=235, Percent_Identity=29.7872340425532, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790551, Length=230, Percent_Identity=30, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI87082128, Length=234, Percent_Identity=26.4957264957265, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1788279, Length=202, Percent_Identity=26.7326732673267, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR021766 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR014310 [H]
Pfam domain/function: PF11808 DUF3329; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49924; Mature: 49924
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINRWIAFTACMLAGGALGWLTTAKGGPAWSLGVGLGLGALIWLMIDSLYLARLLRWLRA CCCHHHHHHHHHHHCCCHHHHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQGREAPAMVSSQLPRLPGVWEEVVDRTRRLLKNRDQQLQESQARLDEFLAAMQASPSGV HCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VLLDTQGRIEWCNQMATQHFGFDVQRDVMQHIANLVREPAFKAYLASGNYSHDVVIPGSL EEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCEEECCCC STPARPVKLSVHVHSYGKDRKLLLSRDITAVELAEAMRRDFVANVSHEIRTPLTVLSGFI CCCCCCEEEEEEEECCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETLRTLPLEEPERARYLALMAQQSQRMQTLVNDLLTLSRLEGSPFPGANDWITTSALLVQ HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH CEQEARALSAVIAPRGHRLEFDAGPASEIAGVQTELYSAMSNLVTNAVRYTPETGLVSVS HHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE WKLLKDGRGQFEVRDTGPGIEPEHLPRLTERFYRIDRSRSRETGGTGLGLAIVKHVAQRH HHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC GAELHIDSQPGHGSRFSLIFPAARIRPAHAA CCEEEECCCCCCCCEEEEEECHHHCCCCCCC >Mature Secondary Structure MINRWIAFTACMLAGGALGWLTTAKGGPAWSLGVGLGLGALIWLMIDSLYLARLLRWLRA CCCHHHHHHHHHHHCCCHHHHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQGREAPAMVSSQLPRLPGVWEEVVDRTRRLLKNRDQQLQESQARLDEFLAAMQASPSGV HCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VLLDTQGRIEWCNQMATQHFGFDVQRDVMQHIANLVREPAFKAYLASGNYSHDVVIPGSL EEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCEEECCCC STPARPVKLSVHVHSYGKDRKLLLSRDITAVELAEAMRRDFVANVSHEIRTPLTVLSGFI CCCCCCEEEEEEEECCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETLRTLPLEEPERARYLALMAQQSQRMQTLVNDLLTLSRLEGSPFPGANDWITTSALLVQ HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH CEQEARALSAVIAPRGHRLEFDAGPASEIAGVQTELYSAMSNLVTNAVRYTPETGLVSVS HHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE WKLLKDGRGQFEVRDTGPGIEPEHLPRLTERFYRIDRSRSRETGGTGLGLAIVKHVAQRH HHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC GAELHIDSQPGHGSRFSLIFPAARIRPAHAA CCEEEECCCCCCCCEEEEEECHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043; 2115874 [H]