Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788135

Identifier: 91788135

GI number: 91788135

Start: 2351752

End: 2354322

Strand: Direct

Name: 91788135

Synonym: Bpro_2264

Alternate gene names: NA

Gene position: 2351752-2354322 (Clockwise)

Preceding gene: 91788129

Following gene: 91788136

Centisome position: 45.22

GC content: 67.79

Gene sequence:

>2571_bases
ATGCCGCCAGAGACCCTTGAGATCCCTGAGAACGCTGTACTGTCCCCGGATGTGCTGTGCTGGCAGCGCGTCATGGCGCA
GCTGGCCGCGACGCTCAAGACGCGAAATGTGCACCCCGCCGAGGCCGTTGTCCTGCTTCCGTATGCGCAGTTGATCCAGC
AGGCGCGCCGGGCCTGGGCCGGGGTTGCGGGCGAAACATTTTTTGTACCGCGATTTGAGACCACCATGAACTGGGCCAGC
AGCCTGGGCGGCACGCTGGGGCTTTTCACGCCATCGGGTGATGATTTGCGCATGGACATGGCGGTCGACATGCTGACCGC
CGCATCGCTGCTGGAACGGGCCGGCCTGGGCGCGCAGCAGGATGCCCTGGCCGGGCGCCTTGTCGAGGCGGCGTGGAGTC
TGGGGCGTGTCGCGGCGGCGGTGCTGCCGGCTCAGCGCCAGGTCTGGAGCGAGCGCCTGGCGGTGTCGCTGCAGGCGGGC
CTGGATTCTCCGGTGCTGGCTCTGGAAGCCGCAGTGGGTCAGATCGCGCTGGCCTGGGCCGCGGCTTCGGCCTATCCGTC
AGATCGCCTGTTCCAGGCCACACCGGCGTTGCTGGCCGTGCTGGAAGGGTTTCAGGCTGAACCGCTGACCGATGCACTGA
AGGCGCACTTCGGCGAGCGTTCCATCTCCATTGCGCTGTGCCTGCCGCAGGACCTGCGGGCTCCCGCGGAATTGCCCCTG
CCGTCGCTGCACGCCGCGATGGACGCCGAGGATGAGGCCGGCCGTGCCGCCGCCTGTGTGCTGGCGCACTTGGCCCAGGG
GCGCAGCCCGGTCGCGCTGATCGCCCAGGACCGGCTCCTGACACGCCGGGTGGGCGCCATGCTGGCCGGGCGCGGCATTG
CGATGCGCGACGAAACAGGCTGGAAGCTGTCCACCACGCGTGCTGCGGCCAGCCTGATGGGCCTGCTGCGCGCCATGCCG
TGGGACGCCTCCACCGACGCCGTACTGGACTGGCTGAAGAATGCACCCGGCGTCAGTCCGGGCGAGGTCACCGCAGCGGA
AACCGAACTGCGCAAGGCTGGCCTGCGCGCCTGGCGCGATCTGCCGGCGACCCCGCAGCCGGCCTTCGCTGCGACCCAGC
AACTCGCCTTGCAGGTCGACGCATTGCGCAAGGCCCTCGGGCGCACACGCCCACTGGCCTCGTGGCTGCGCGACCTGCGT
GCTGCCTTGCAGTCGGCAGGGCAGTGGGACGCGCTGGAAATCGACAATGCCGGCCAGACGGTGCTGGAGGTGCTTCGCCT
GCATGAGGGCGCCGAGGCGGAGTTCGACAGCGCACCCACGATGGCGCTGGCCTCGTTCACCAGTTGGGTGAACCAGGCCC
TGGAAGGCGGCAAGTTTTCTCCCGAGCACCCGCAGGGGGAGCAGGTGGTGATCCTGCCGCTGGCACAACTCCTGGGGCGG
CCCATGCAGGCGGTGGTGTTGCCCGGCTGCGATGAAATCCGCCTGCCGGTTTCGCCCGAGCCTGCGGGTCTCTGGACGCC
CGGACAACGCGAAGTTCTGGGCCTGCCCTCGCGTGACATGCTGGCCAGCGCCAACCGGGCTGCCTGGCACTATGTCCTGC
AACTGCCGCATGTGGACCTGCTTTGGCGCACCAGCGAGGCCGGTGAGCACCTGATTCCCAGCGGTTTTGTGCAGGAGCTG
CTGCTCGCGCAAGCCGGGCACGGCGACAGTCCAGCCTTGGCGACTGACTCCCGCCGCTTGCGCCCGGTCGCGATCCAGCC
CACGCCGCGTCCCATGCCCACCGGCGAGGCCTTGCCGGTGACCCGGCTGTCGGCCAGCGCCTATGAAGACCTGCGCCGCT
GTCCCTACCGTTTTTTTGCACTGCGCCAGTTGCGCCTGCAGGAGTCCGGCGAGCTGGACAGCGAACTGGACAAACGCGAC
TTCGGCAATTGGCTGCACAGCGTTCTGCGCTATTTCCATGAGGCACTGAAAGCCGCGCCAACCCCCGAATTGTCTGCGCG
TGAAGCCATGATTAACCTGGCGGCTGAACGGGTCACGCAGGCGATGGCCCTGAGCGACAGCGAGTTCCTGCCGTTTGCCG
CGATCTGGCCGCGTGTGCGCGAGGGCTACCTGGCCTGGCTCACCGATCACGAGGCGGAGGGCGCCCGTTTTGAGGAGGCG
GAAGCCGAGCGTGAAATGCCCCTGGGCAAGCTGCAGTTGATCGGCAAACTGGACCGCATCGACCGCCAGGCCGATGGCCA
TACGCTGCTGATTGACTACAAAACCGAGCCACGCACAGTGACGGTCGAGCGTATCAAGGACGGGCAGGAAGACACCCAAC
TGGCGTTCTATGCCGCGCTGATGCACGACGACACGCTGGCGGCGGCCTACGTCAACCTTGGCGAAAAAGAAGCCACCCGC
ACCTACGCGCAGCCCGGGATCGTGGGCCTGCGTGACGCGCTGATCGAAAGCATCCTGACCGACATGGACCGCATTGCGCG
CGGCACGCCGCTGCCCGCGCTGGGCGAGGGCAAGGCCTGCGAATACTGTGCGGCGCGCGGCTTGTGCCGCAAGGATTTCT
GGAATGAGTAG

Upstream 100 bases:

>100_bases
GCTCATGCAGCCGCTATGGGCCCGATAGCCGTCTTCTGAAACACGCCCCGCGTCCCGCTTGCCATCCGTTTTTCCTGTTT
CCGAGTTCCCTCATCAATCC

Downstream 100 bases:

>100_bases
AGCCCCCACGCTTCTCGCTTCGCGTACTACGCTTCCCCCCGGGGGGGCCGCTGCGCCTGCGGCCCGGCGAAGCCGGTTCC
GCGGCCCCTGCTGGTATGAA

Product: exonuclease-like protein

Products: NA

Alternate protein names: Exonuclease-Like Protein; Helicase C_term RecB Family Exonuclease; Exonuclease-Like; Helicase C_term Recb Family Exonuclease; Inactivated Superfamily I Helicase; Inactivated Superfamily I Helicase-Like Protein

Number of amino acids: Translated: 856; Mature: 855

Protein sequence:

>856_residues
MPPETLEIPENAVLSPDVLCWQRVMAQLAATLKTRNVHPAEAVVLLPYAQLIQQARRAWAGVAGETFFVPRFETTMNWAS
SLGGTLGLFTPSGDDLRMDMAVDMLTAASLLERAGLGAQQDALAGRLVEAAWSLGRVAAAVLPAQRQVWSERLAVSLQAG
LDSPVLALEAAVGQIALAWAAASAYPSDRLFQATPALLAVLEGFQAEPLTDALKAHFGERSISIALCLPQDLRAPAELPL
PSLHAAMDAEDEAGRAAACVLAHLAQGRSPVALIAQDRLLTRRVGAMLAGRGIAMRDETGWKLSTTRAAASLMGLLRAMP
WDASTDAVLDWLKNAPGVSPGEVTAAETELRKAGLRAWRDLPATPQPAFAATQQLALQVDALRKALGRTRPLASWLRDLR
AALQSAGQWDALEIDNAGQTVLEVLRLHEGAEAEFDSAPTMALASFTSWVNQALEGGKFSPEHPQGEQVVILPLAQLLGR
PMQAVVLPGCDEIRLPVSPEPAGLWTPGQREVLGLPSRDMLASANRAAWHYVLQLPHVDLLWRTSEAGEHLIPSGFVQEL
LLAQAGHGDSPALATDSRRLRPVAIQPTPRPMPTGEALPVTRLSASAYEDLRRCPYRFFALRQLRLQESGELDSELDKRD
FGNWLHSVLRYFHEALKAAPTPELSAREAMINLAAERVTQAMALSDSEFLPFAAIWPRVREGYLAWLTDHEAEGARFEEA
EAEREMPLGKLQLIGKLDRIDRQADGHTLLIDYKTEPRTVTVERIKDGQEDTQLAFYAALMHDDTLAAAYVNLGEKEATR
TYAQPGIVGLRDALIESILTDMDRIARGTPLPALGEGKACEYCAARGLCRKDFWNE

Sequences:

>Translated_856_residues
MPPETLEIPENAVLSPDVLCWQRVMAQLAATLKTRNVHPAEAVVLLPYAQLIQQARRAWAGVAGETFFVPRFETTMNWAS
SLGGTLGLFTPSGDDLRMDMAVDMLTAASLLERAGLGAQQDALAGRLVEAAWSLGRVAAAVLPAQRQVWSERLAVSLQAG
LDSPVLALEAAVGQIALAWAAASAYPSDRLFQATPALLAVLEGFQAEPLTDALKAHFGERSISIALCLPQDLRAPAELPL
PSLHAAMDAEDEAGRAAACVLAHLAQGRSPVALIAQDRLLTRRVGAMLAGRGIAMRDETGWKLSTTRAAASLMGLLRAMP
WDASTDAVLDWLKNAPGVSPGEVTAAETELRKAGLRAWRDLPATPQPAFAATQQLALQVDALRKALGRTRPLASWLRDLR
AALQSAGQWDALEIDNAGQTVLEVLRLHEGAEAEFDSAPTMALASFTSWVNQALEGGKFSPEHPQGEQVVILPLAQLLGR
PMQAVVLPGCDEIRLPVSPEPAGLWTPGQREVLGLPSRDMLASANRAAWHYVLQLPHVDLLWRTSEAGEHLIPSGFVQEL
LLAQAGHGDSPALATDSRRLRPVAIQPTPRPMPTGEALPVTRLSASAYEDLRRCPYRFFALRQLRLQESGELDSELDKRD
FGNWLHSVLRYFHEALKAAPTPELSAREAMINLAAERVTQAMALSDSEFLPFAAIWPRVREGYLAWLTDHEAEGARFEEA
EAEREMPLGKLQLIGKLDRIDRQADGHTLLIDYKTEPRTVTVERIKDGQEDTQLAFYAALMHDDTLAAAYVNLGEKEATR
TYAQPGIVGLRDALIESILTDMDRIARGTPLPALGEGKACEYCAARGLCRKDFWNE
>Mature_855_residues
PPETLEIPENAVLSPDVLCWQRVMAQLAATLKTRNVHPAEAVVLLPYAQLIQQARRAWAGVAGETFFVPRFETTMNWASS
LGGTLGLFTPSGDDLRMDMAVDMLTAASLLERAGLGAQQDALAGRLVEAAWSLGRVAAAVLPAQRQVWSERLAVSLQAGL
DSPVLALEAAVGQIALAWAAASAYPSDRLFQATPALLAVLEGFQAEPLTDALKAHFGERSISIALCLPQDLRAPAELPLP
SLHAAMDAEDEAGRAAACVLAHLAQGRSPVALIAQDRLLTRRVGAMLAGRGIAMRDETGWKLSTTRAAASLMGLLRAMPW
DASTDAVLDWLKNAPGVSPGEVTAAETELRKAGLRAWRDLPATPQPAFAATQQLALQVDALRKALGRTRPLASWLRDLRA
ALQSAGQWDALEIDNAGQTVLEVLRLHEGAEAEFDSAPTMALASFTSWVNQALEGGKFSPEHPQGEQVVILPLAQLLGRP
MQAVVLPGCDEIRLPVSPEPAGLWTPGQREVLGLPSRDMLASANRAAWHYVLQLPHVDLLWRTSEAGEHLIPSGFVQELL
LAQAGHGDSPALATDSRRLRPVAIQPTPRPMPTGEALPVTRLSASAYEDLRRCPYRFFALRQLRLQESGELDSELDKRDF
GNWLHSVLRYFHEALKAAPTPELSAREAMINLAAERVTQAMALSDSEFLPFAAIWPRVREGYLAWLTDHEAEGARFEEAE
AEREMPLGKLQLIGKLDRIDRQADGHTLLIDYKTEPRTVTVERIKDGQEDTQLAFYAALMHDDTLAAAYVNLGEKEATRT
YAQPGIVGLRDALIESILTDMDRIARGTPLPALGEGKACEYCAARGLCRKDFWNE

Specific function: Unknown

COG id: COG2887

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93057; Mature: 92926

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPETLEIPENAVLSPDVLCWQRVMAQLAATLKTRNVHPAEAVVLLPYAQLIQQARRAWA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHEEEHHHHHHHHHHHHHHH
GVAGETFFVPRFETTMNWASSLGGTLGLFTPSGDDLRMDMAVDMLTAASLLERAGLGAQQ
CCCCCEEEECCHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCCCH
DALAGRLVEAAWSLGRVAAAVLPAQRQVWSERLAVSLQAGLDSPVLALEAAVGQIALAWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
AASAYPSDRLFQATPALLAVLEGFQAEPLTDALKAHFGERSISIALCLPQDLRAPAELPL
HHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCC
PSLHAAMDAEDEAGRAAACVLAHLAQGRSPVALIAQDRLLTRRVGAMLAGRGIAMRDETG
CHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEECCCC
WKLSTTRAAASLMGLLRAMPWDASTDAVLDWLKNAPGVSPGEVTAAETELRKAGLRAWRD
CEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC
LPATPQPAFAATQQLALQVDALRKALGRTRPLASWLRDLRAALQSAGQWDALEIDNAGQT
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHH
VLEVLRLHEGAEAEFDSAPTMALASFTSWVNQALEGGKFSPEHPQGEQVVILPLAQLLGR
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHCC
PMQAVVLPGCDEIRLPVSPEPAGLWTPGQREVLGLPSRDMLASANRAAWHYVLQLPHVDL
CCEEEECCCCCCEECCCCCCCCCCCCCCCCCEECCCCHHHHHCCCHHHEEEEEECCCEEE
LWRTSEAGEHLIPSGFVQELLLAQAGHGDSPALATDSRRLRPVAIQPTPRPMPTGEALPV
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCH
TRLSASAYEDLRRCPYRFFALRQLRLQESGELDSELDKRDFGNWLHSVLRYFHEALKAAP
HHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TPELSAREAMINLAAERVTQAMALSDSEFLPFAAIWPRVREGYLAWLTDHEAEGARFEEA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCHHH
EAEREMPLGKLQLIGKLDRIDRQADGHTLLIDYKTEPRTVTVERIKDGQEDTQLAFYAAL
HHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHCCCCHHHHHHHHHH
MHDDTLAAAYVNLGEKEATRTYAQPGIVGLRDALIESILTDMDRIARGTPLPALGEGKAC
HHCCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
EYCAARGLCRKDFWNE
HHHHHCCCHHHHCCCC
>Mature Secondary Structure 
PPETLEIPENAVLSPDVLCWQRVMAQLAATLKTRNVHPAEAVVLLPYAQLIQQARRAWA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHEEEHHHHHHHHHHHHHHH
GVAGETFFVPRFETTMNWASSLGGTLGLFTPSGDDLRMDMAVDMLTAASLLERAGLGAQQ
CCCCCEEEECCHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCCCH
DALAGRLVEAAWSLGRVAAAVLPAQRQVWSERLAVSLQAGLDSPVLALEAAVGQIALAWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
AASAYPSDRLFQATPALLAVLEGFQAEPLTDALKAHFGERSISIALCLPQDLRAPAELPL
HHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCC
PSLHAAMDAEDEAGRAAACVLAHLAQGRSPVALIAQDRLLTRRVGAMLAGRGIAMRDETG
CHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEECCCC
WKLSTTRAAASLMGLLRAMPWDASTDAVLDWLKNAPGVSPGEVTAAETELRKAGLRAWRD
CEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC
LPATPQPAFAATQQLALQVDALRKALGRTRPLASWLRDLRAALQSAGQWDALEIDNAGQT
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHH
VLEVLRLHEGAEAEFDSAPTMALASFTSWVNQALEGGKFSPEHPQGEQVVILPLAQLLGR
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHCC
PMQAVVLPGCDEIRLPVSPEPAGLWTPGQREVLGLPSRDMLASANRAAWHYVLQLPHVDL
CCEEEECCCCCCEECCCCCCCCCCCCCCCCCEECCCCHHHHHCCCHHHEEEEEECCCEEE
LWRTSEAGEHLIPSGFVQELLLAQAGHGDSPALATDSRRLRPVAIQPTPRPMPTGEALPV
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCH
TRLSASAYEDLRRCPYRFFALRQLRLQESGELDSELDKRDFGNWLHSVLRYFHEALKAAP
HHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TPELSAREAMINLAAERVTQAMALSDSEFLPFAAIWPRVREGYLAWLTDHEAEGARFEEA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCHHH
EAEREMPLGKLQLIGKLDRIDRQADGHTLLIDYKTEPRTVTVERIKDGQEDTQLAFYAAL
HHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHCCCCHHHHHHHHHH
MHDDTLAAAYVNLGEKEATRTYAQPGIVGLRDALIESILTDMDRIARGTPLPALGEGKAC
HHCCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
EYCAARGLCRKDFWNE
HHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA